RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 Q6ZRX8 168 aa9.17□□□□□ -0.94
COL9A2-207ENST00000482722 CASC10Q5T4H9 136 aa9.16□□□□□ -0.94
COL9A2-207ENST00000482722 A8MUN3 132 aa9.16□□□□□ -0.94
COL9A2-207ENST00000482722 SPRR4Q96PI1 79 aa9.16□□□□□ -0.94
COL9A2-207ENST00000482722 DHRS4-AS1Q9P1J3 65 aa9.16□□□□□ -0.94
COL9A2-207ENST00000482722 DNAH9Q9NYC9 4486 aa9.15□□□□□ -0.94
COL9A2-207ENST00000482722 HCG22E2RYF7 251 aa9.15□□□□□ -0.94
COL9A2-207ENST00000482722 DNHD1Q96M86 4753 aa9.14□□□□□ -0.95
COL9A2-207ENST00000482722 A8MU10 97 aa9.14□□□□□ -0.95
COL9A2-207ENST00000482722 DEFB116Q30KQ4 102 aa9.14□□□□□ -0.95
COL9A2-207ENST00000482722 KRTAP4-16G5E9R7 235 aaPredicted RBP9.13□□□□□ -0.95
COL9A2-207ENST00000482722 TGP01266 2768 aa9.12□□□□□ -0.95
COL9A2-207ENST00000482722 WFDC13Q8IUB5 93 aa9.1□□□□□ -0.95
COL9A2-207ENST00000482722 PRKDCP78527 4128 aaKnown RBP9.1□□□□□ -0.95
COL9A2-207ENST00000482722 SRRM2Q9UQ35 2752 aaKnown RBP9.1□□□□□ -0.95
COL9A2-207ENST00000482722 UBE2BP63146 152 aa9.1□□□□□ -0.95
COL9A2-207ENST00000482722 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
COL9A2-207ENST00000482722 NDUFB1O75438 58 aa9.09□□□□□ -0.95
COL9A2-207ENST00000482722 DNAH10OSP0CZ25 163 aa9.09□□□□□ -0.95
COL9A2-207ENST00000482722 IGLV1-50A0A075B6I6 118 aa9.08□□□□□ -0.96
COL9A2-207ENST00000482722 Q5VV11 94 aa9.08□□□□□ -0.96
COL9A2-207ENST00000482722 KRTAP7-1Q8IUC3 87 aa9.08□□□□□ -0.96
COL9A2-207ENST00000482722 SPRR1AP35321 89 aa9.07□□□□□ -0.96
COL9A2-207ENST00000482722 B9D2Q9BPU9 175 aa9.07□□□□□ -0.96
COL9A2-207ENST00000482722 MP68P56378 58 aa9.06□□□□□ -0.96
COL9A2-207ENST00000482722 LINC00208Q96KT6 92 aa9.06□□□□□ -0.96
COL9A2-207ENST00000482722 PLECQ15149 4684 aaKnown RBP9.06□□□□□ -0.96
COL9A2-207ENST00000482722 LINC00476Q8WZB0 136 aa9.06□□□□□ -0.96
COL9A2-207ENST00000482722 MEGF8Q7Z7M0 2845 aa9.05□□□□□ -0.96
COL9A2-207ENST00000482722 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
COL9A2-207ENST00000482722 RPL37AP61513 92 aaKnown RBP9.02□□□□□ -0.97
COL9A2-207ENST00000482722 IGFL1Q6UW32 110 aa9.02□□□□□ -0.97
COL9A2-207ENST00000482722 MRPL55Q7Z7F7 128 aaKnown RBP9.02□□□□□ -0.97
COL9A2-207ENST00000482722 CHKB-CPT1BH3BT56 60 aa9.02□□□□□ -0.97
COL9A2-207ENST00000482722 Q8N9P0 234 aaPredicted RBP9.02□□□□□ -0.97
COL9A2-207ENST00000482722 DNAH1Q9P2D7 4330 aa9.01□□□□□ -0.97
COL9A2-207ENST00000482722 TLX1NBP0CAT3 122 aa9.01□□□□□ -0.97
COL9A2-207ENST00000482722 IGKV2-24A0A0C4DH68 120 aa9.01□□□□□ -0.97
COL9A2-207ENST00000482722 IGLV5-37A0A075B6J1 123 aa9□□□□□ -0.97
COL9A2-207ENST00000482722 A0A087WSZ3 146 aa8.99□□□□□ -0.97
COL9A2-207ENST00000482722 PRLHP81277 87 aa8.99□□□□□ -0.97
COL9A2-207ENST00000482722 H0Y9P7 68 aa8.99□□□□□ -0.97
COL9A2-207ENST00000482722 PRR15LQ9BU68 103 aa8.98□□□□□ -0.97
COL9A2-207ENST00000482722 KRTAP29-1A8MX34 341 aaPredicted RBP8.98□□□□□ -0.97
COL9A2-207ENST00000482722 C16orf90A8MZG2 172 aa8.98□□□□□ -0.97
COL9A2-207ENST00000482722 UBE2AP49459 152 aa8.98□□□□□ -0.97
COL9A2-207ENST00000482722 CD164Q04900 197 aa8.98□□□□□ -0.97
COL9A2-207ENST00000482722 SPANXA2-OT1Q8N9U9 137 aa8.97□□□□□ -0.97
COL9A2-207ENST00000482722 STARD9Q9P2P6 4700 aa8.97□□□□□ -0.97
COL9A2-207ENST00000482722 REG3GQ6UW15 175 aa8.97□□□□□ -0.97
COL9A2-207ENST00000482722 LIMD2Q9BT23 127 aa8.96□□□□□ -0.97
COL9A2-207ENST00000482722 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
COL9A2-207ENST00000482722 KRTAP1-5Q9BYS1 174 aa8.94□□□□□ -0.98
COL9A2-207ENST00000482722 CASC2Q6XLA1 102 aa8.94□□□□□ -0.98
COL9A2-207ENST00000482722 KMT2AQ03164 3969 aa8.92□□□□□ -0.98
COL9A2-207ENST00000482722 A0A096LNI7 61 aa8.92□□□□□ -0.98
COL9A2-207ENST00000482722 CNBPP62633 177 aaKnown RBP8.92□□□□□ -0.98
COL9A2-207ENST00000482722 LCA10Q71F78 164 aa8.92□□□□□ -0.98
COL9A2-207ENST00000482722 H3BPC8 53 aa8.91□□□□□ -0.98
COL9A2-207ENST00000482722 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
COL9A2-207ENST00000482722 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
COL9A2-207ENST00000482722 IGLV8-61A0A075B6I0 122 aa8.88□□□□□ -0.99
COL9A2-207ENST00000482722 A6NED7 52 aa8.88□□□□□ -0.99
COL9A2-207ENST00000482722 COA5Q86WW8 74 aa8.88□□□□□ -0.99
COL9A2-207ENST00000482722 Q75L30 129 aa8.88□□□□□ -0.99
COL9A2-207ENST00000482722 CHTF8P0CG12 524 aa8.87□□□□□ -0.99
COL9A2-207ENST00000482722 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
COL9A2-207ENST00000482722 ATP11AUNQ6ZP68 121 aa8.86□□□□□ -0.99
COL9A2-207ENST00000482722 A8MWP4 228 aa8.85□□□□□ -0.99
COL9A2-207ENST00000482722 RBM12B-AS1Q9P1G2 102 aa8.85□□□□□ -0.99
COL9A2-207ENST00000482722 LOC101927531A0A1B0GV80 90 aa8.85□□□□□ -0.99
COL9A2-207ENST00000482722 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
COL9A2-207ENST00000482722 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
COL9A2-207ENST00000482722 KRTAP11-1Q8IUC1 163 aa8.83□□□□□ -1
COL9A2-207ENST00000482722 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
COL9A2-207ENST00000482722 IGLV7-46A0A075B6I9 117 aa8.82□□□□□ -1
COL9A2-207ENST00000482722 A6NN06 94 aa8.82□□□□□ -1
COL9A2-207ENST00000482722 PCOTHQ58A44 107 aa8.81□□□□□ -1
COL9A2-207ENST00000482722 APLNQ9ULZ1 77 aa8.81□□□□□ -1
COL9A2-207ENST00000482722 H0Y9J4 135 aa8.8□□□□□ -1
COL9A2-207ENST00000482722 DYNC2H1Q8NCM8 4307 aaKnown RBP8.8□□□□□ -1
COL9A2-207ENST00000482722 MMP24-AS1A0A0U1RRL7 71 aa8.79□□□□□ -1
COL9A2-207ENST00000482722 CDC42SE1Q9NRR8 79 aa8.79□□□□□ -1
COL9A2-207ENST00000482722 SPAG11AQ6PDA7 123 aa8.78□□□□□ -1
COL9A2-207ENST00000482722 NDUFS5O43920 106 aa8.77□□□□□ -1.01
COL9A2-207ENST00000482722 VPS13DQ5THJ4 4388 aa8.77□□□□□ -1.01
COL9A2-207ENST00000482722 DNAH2Q9P225 4427 aa8.76□□□□□ -1.01
COL9A2-207ENST00000482722 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
COL9A2-207ENST00000482722 MOBPQ13875 183 aa8.73□□□□□ -1.01
COL9A2-207ENST00000482722 PLAC8Q9NZF1 115 aa8.72□□□□□ -1.01
COL9A2-207ENST00000482722 SPRR1BP22528 89 aa8.71□□□□□ -1.02
COL9A2-207ENST00000482722 SPINK7P58062 85 aa8.71□□□□□ -1.02
COL9A2-207ENST00000482722 PANO1I0J062 215 aa8.7□□□□□ -1.02
COL9A2-207ENST00000482722 C7orf65Q6ZTY9 151 aa8.69□□□□□ -1.02
COL9A2-207ENST00000482722 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
COL9A2-207ENST00000482722 IGLV9-49A0A0B4J1Y8 123 aa8.67□□□□□ -1.02
COL9A2-207ENST00000482722 HECTD4Q9Y4D8 3996 aa8.67□□□□□ -1.02
COL9A2-207ENST00000482722 FRAS1Q86XX4 4008 aa8.67□□□□□ -1.02
COL9A2-207ENST00000482722 HRES1P13985 223 aa8.67□□□□□ -1.02
COL9A2-207ENST00000482722 NBDYA0A0U1RRE5 68 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms