RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 RTL8CO15255 209 aa7.38□□□□□ -1.23
SMPD4-218ENST00000482171 OXTP01178 125 aa7.37□□□□□ -1.23
SMPD4-218ENST00000482171 EPM2AB3EWF7 344 aa7.36□□□□□ -1.23
SMPD4-218ENST00000482171 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
SMPD4-218ENST00000482171 CUBNO60494 3623 aa7.35□□□□□ -1.23
SMPD4-218ENST00000482171 A0A0G2JQZ4 141 aa7.34□□□□□ -1.23
SMPD4-218ENST00000482171 A0A1W2PNN7 141 aa7.34□□□□□ -1.23
SMPD4-218ENST00000482171 A0A1B0GW54 56 aa7.34□□□□□ -1.23
SMPD4-218ENST00000482171 Q8N377 158 aa7.33□□□□□ -1.24
SMPD4-218ENST00000482171 IGLV1-50A0A075B6I6 118 aa7.33□□□□□ -1.24
SMPD4-218ENST00000482171 MOBPQ13875 183 aa7.32□□□□□ -1.24
SMPD4-218ENST00000482171 APLNQ9ULZ1 77 aa7.32□□□□□ -1.24
SMPD4-218ENST00000482171 TRAV22A0A0B4J277 110 aa7.32□□□□□ -1.24
SMPD4-218ENST00000482171 WWC2-AS2Q96NR7 200 aa7.32□□□□□ -1.24
SMPD4-218ENST00000482171 KCNQ1DNQ9H478 68 aa7.32□□□□□ -1.24
SMPD4-218ENST00000482171 FP248Q71RG6 208 aaPredicted RBP7.31□□□□□ -1.24
SMPD4-218ENST00000482171 SPENQ96T58 3664 aaKnown RBP7.31□□□□□ -1.24
SMPD4-218ENST00000482171 RETNLBQ9BQ08 111 aa7.3□□□□□ -1.24
SMPD4-218ENST00000482171 TENM1Q9UKZ4 2725 aa7.29□□□□□ -1.24
SMPD4-218ENST00000482171 Q8NDZ9 215 aa7.29□□□□□ -1.24
SMPD4-218ENST00000482171 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
SMPD4-218ENST00000482171 OTOGQ6ZRI0 2925 aa7.27□□□□□ -1.25
SMPD4-218ENST00000482171 A0A1W2PNM2 257 aa7.27□□□□□ -1.25
SMPD4-218ENST00000482171 C9orf163Q8N9P6 203 aa7.27□□□□□ -1.25
SMPD4-218ENST00000482171 A0A087WTM6 91 aa7.27□□□□□ -1.25
SMPD4-218ENST00000482171 FAM229BQ4G0N7 80 aa7.26□□□□□ -1.25
SMPD4-218ENST00000482171 FBN1P35555 2871 aaKnown RBP7.24□□□□□ -1.25
SMPD4-218ENST00000482171 TLX1NBP0CAT3 122 aa7.24□□□□□ -1.25
SMPD4-218ENST00000482171 NBPF19A0A087WUL8 3843 aa7.24□□□□□ -1.25
SMPD4-218ENST00000482171 H3BPC8 53 aa7.24□□□□□ -1.25
SMPD4-218ENST00000482171 IGFL1Q6UW32 110 aa7.24□□□□□ -1.25
SMPD4-218ENST00000482171 ANAPC11Q9NYG5 84 aa7.23□□□□□ -1.25
SMPD4-218ENST00000482171 COA5Q86WW8 74 aa7.23□□□□□ -1.25
SMPD4-218ENST00000482171 CSMD2Q7Z408 3487 aa7.23□□□□□ -1.25
SMPD4-218ENST00000482171 VWFP04275 2813 aa7.22□□□□□ -1.25
SMPD4-218ENST00000482171 SPINK1P00995 79 aa7.21□□□□□ -1.25
SMPD4-218ENST00000482171 SPACA4Q8TDM5 124 aa7.21□□□□□ -1.25
SMPD4-218ENST00000482171 ZFHX3Q15911 3703 aa7.2□□□□□ -1.26
SMPD4-218ENST00000482171 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
SMPD4-218ENST00000482171 TP53AIP1Q9HCN2 124 aa7.2□□□□□ -1.26
SMPD4-218ENST00000482171 PDZD2O15018 2839 aa7.2□□□□□ -1.26
SMPD4-218ENST00000482171 KRTAP1-5Q9BYS1 174 aa7.2□□□□□ -1.26
SMPD4-218ENST00000482171 PLA2G2DQ9UNK4 145 aa7.2□□□□□ -1.26
SMPD4-218ENST00000482171 A8MWP4 228 aa7.19□□□□□ -1.26
SMPD4-218ENST00000482171 IGLV5-48A0A075B6I7 105 aa7.18□□□□□ -1.26
SMPD4-218ENST00000482171 CNBPP62633 177 aaKnown RBP7.18□□□□□ -1.26
SMPD4-218ENST00000482171 PRR15Q8IV56 129 aa7.17□□□□□ -1.26
SMPD4-218ENST00000482171 CYP4F30PQ9H0H9 118 aa7.17□□□□□ -1.26
SMPD4-218ENST00000482171 A0A1B0GU69 56 aa7.17□□□□□ -1.26
SMPD4-218ENST00000482171 CD164Q04900 197 aa7.17□□□□□ -1.26
SMPD4-218ENST00000482171 LOC101927531A0A1B0GV80 90 aa7.16□□□□□ -1.26
SMPD4-218ENST00000482171 DSCR10P59022 87 aa7.16□□□□□ -1.26
SMPD4-218ENST00000482171 TNP2Q05952 138 aa7.15□□□□□ -1.26
SMPD4-218ENST00000482171 PSORS1C2Q9UIG4 136 aa7.15□□□□□ -1.26
SMPD4-218ENST00000482171 SMR3BP02814 79 aaPredicted RBP7.15□□□□□ -1.27
SMPD4-218ENST00000482171 Q1T7F1 81 aa7.14□□□□□ -1.27
SMPD4-218ENST00000482171 K7ERS5 55 aa7.14□□□□□ -1.27
SMPD4-218ENST00000482171 KRTAP26-1Q6PEX3 210 aa7.14□□□□□ -1.27
SMPD4-218ENST00000482171 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.14□□□□□ -1.27
SMPD4-218ENST00000482171 IGKV2D-30A0A075B6S6 120 aa7.13□□□□□ -1.27
SMPD4-218ENST00000482171 IGKV2-30P06310 120 aa7.13□□□□□ -1.27
SMPD4-218ENST00000482171 ACYP2P14621 99 aa7.13□□□□□ -1.27
SMPD4-218ENST00000482171 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
SMPD4-218ENST00000482171 BSNQ9UPA5 3926 aa7.13□□□□□ -1.27
SMPD4-218ENST00000482171 KTN1-AS1Q86SY8 53 aa7.12□□□□□ -1.27
SMPD4-218ENST00000482171 ZNF861PO60384 105 aa7.12□□□□□ -1.27
SMPD4-218ENST00000482171 IGLV8-61A0A075B6I0 122 aa7.11□□□□□ -1.27
SMPD4-218ENST00000482171 IGLV5-37A0A075B6J1 123 aa7.11□□□□□ -1.27
SMPD4-218ENST00000482171 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
SMPD4-218ENST00000482171 PLA2G1BP04054 148 aaKnown RBP7.1□□□□□ -1.27
SMPD4-218ENST00000482171 PKD1L1Q8TDX9 2849 aa7.09□□□□□ -1.27
SMPD4-218ENST00000482171 SPRR4Q96PI1 79 aa7.07□□□□□ -1.28
SMPD4-218ENST00000482171 MRPL34Q9BQ48 92 aaKnown RBP7.07□□□□□ -1.28
SMPD4-218ENST00000482171 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
SMPD4-218ENST00000482171 C8orf17Q9NRJ1 99 aa7.06□□□□□ -1.28
SMPD4-218ENST00000482171 C8orf87E5RJ46 101 aa7.06□□□□□ -1.28
SMPD4-218ENST00000482171 IGLV7-43P04211 117 aa7.05□□□□□ -1.28
SMPD4-218ENST00000482171 C7orf65Q6ZTY9 151 aa7.05□□□□□ -1.28
SMPD4-218ENST00000482171 Q8N9P0 234 aaPredicted RBP7.03□□□□□ -1.28
SMPD4-218ENST00000482171 PRR26Q8N8Z3 221 aa7.02□□□□□ -1.29
SMPD4-218ENST00000482171 SPRR1AP35321 89 aa7.01□□□□□ -1.29
SMPD4-218ENST00000482171 CDC42SE1Q9NRR8 79 aa7.01□□□□□ -1.29
SMPD4-218ENST00000482171 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
SMPD4-218ENST00000482171 LINC00313P59037 77 aa7.01□□□□□ -1.29
SMPD4-218ENST00000482171 A0A1B0GVX0 72 aa7□□□□□ -1.29
SMPD4-218ENST00000482171 RBM12B-AS1Q9P1G2 102 aa7□□□□□ -1.29
SMPD4-218ENST00000482171 Q5VV11 94 aa6.99□□□□□ -1.29
SMPD4-218ENST00000482171 DMBT1Q9UGM3 2413 aaPredicted RBP6.99□□□□□ -1.29
SMPD4-218ENST00000482171 LCA10Q71F78 164 aa6.98□□□□□ -1.29
SMPD4-218ENST00000482171 PANO1I0J062 215 aa6.98□□□□□ -1.29
SMPD4-218ENST00000482171 UQCR11O14957 56 aa6.97□□□□□ -1.29
SMPD4-218ENST00000482171 SSBP3-AS1Q7Z2R9 100 aa6.96□□□□□ -1.3
SMPD4-218ENST00000482171 Q96NJ1 140 aa6.96□□□□□ -1.3
SMPD4-218ENST00000482171 IGLV7-46A0A075B6I9 117 aa6.95□□□□□ -1.3
SMPD4-218ENST00000482171 MIR22HGQ0VDD5 57 aa6.94□□□□□ -1.3
SMPD4-218ENST00000482171 Q75L30 129 aa6.93□□□□□ -1.3
SMPD4-218ENST00000482171 TENM2Q9NT68 2774 aa6.92□□□□□ -1.3
SMPD4-218ENST00000482171 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
SMPD4-218ENST00000482171 LINC00304Q8N9R0 145 aa6.91□□□□□ -1.3
SMPD4-218ENST00000482171 TGP01266 2768 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms