RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 ZNF815PA8K554 130 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 PFDN1O60925 122 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 ATP6V1G2O95670 118 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 PET100P0DJ07 73 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 MT1GP13640 62 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 DDTP30046 118 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 HINT1P49773 126 aaPredicted RBP0.7□□□□□ -2.3
USH2A-204ENST00000481786 GNG4P50150 75 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 MRPL51Q4U2R6 128 aaKnown RBP0.7□□□□□ -2.3
USH2A-204ENST00000481786 CENPWQ5EE01 88 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 LINC00299Q6ZSB3 139 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 BOD1L2Q8IYS8 172 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 SMIM2Q9BVW6 85 aa0.7□□□□□ -2.3
USH2A-204ENST00000481786 A0A087WXM4 84 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 TRBV7-7A0A0K0K1E9 115 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 A0A1B0GUT8 65 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 TINCRA0A1B0GVN0 87 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 MAP1LC3B2A6NCE7 125 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 CENPXA8MT69 81 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 HMSDA8MTL9 139 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 H0YAA0 97 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 LST1O00453 97 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 ZNF73O43830 326 aaPredicted RBP0.69□□□□□ -2.3
USH2A-204ENST00000481786 LINC00158P58513 81 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 KRTAP12-1P59990 96 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 CCL20P78556 96 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 PMVKQ15126 192 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 TAL2Q16559 108 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 PYDC2Q56P42 97 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 ENKURQ8TC29 256 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 MAP1LC3BQ9GZQ8 125 aa0.69□□□□□ -2.3
USH2A-204ENST00000481786 TRAV23DV6A0A075B6W5 121 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 LOC389332A0A1B0GUA5 103 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 A6NDN8 102 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 IGIPA6NJ69 53 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 H3BRM9 83 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 MT1EP04732 61 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 SPINK8P0C7L1 97 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 LINC00313P59037 77 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 S100A7L2Q5SY68 101 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 AKR1C8PQ5T2L2 129 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 LCA10Q71F78 164 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 DEFB105AQ8NG35 78 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 SFT2D1Q8WV19 159 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 PPP1R1CQ8WVI7 109 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 PLAC4Q8WY50 150 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 CYSLTR1Q9Y271 337 aa0.68□□□□□ -2.3
USH2A-204ENST00000481786 IGLV5-48A0A075B6I7 105 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 A0A087WSZ3 146 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 HIGD1CA8MV81 97 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 MPC2O95563 127 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 PPBPP02775 128 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 C3orf79P0CE67 100 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 G0S2P27469 103 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 CKS2P33552 79 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 FAM104BQ5XKR9 115 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 RPL7L1Q6DKI1 246 aaKnown RBP0.67□□□□□ -2.3
USH2A-204ENST00000481786 Q6JHZ5 121 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 CLEC2BQ92478 149 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 Q9H521 79 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 NXT2Q9NPJ8 142 aaKnown RBP0.67□□□□□ -2.3
USH2A-204ENST00000481786 SPANXB1Q9NS25 103 aaPredicted RBP0.67□□□□□ -2.3
USH2A-204ENST00000481786 SS18L2Q9UHA2 77 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 V9GYH0 126 aa0.67□□□□□ -2.3
USH2A-204ENST00000481786 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 LINC00587B1AMM8 73 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 F8WEM9 126 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 K7EMI3 77 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 GATCO43716 136 aaKnown RBP0.66□□□□□ -2.3
USH2A-204ENST00000481786 PDE6DO43924 150 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 NPYP01303 97 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 PDE6GP18545 87 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 H2BFSP57053 126 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 TRIQKQ629K1 86 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 CSAG1Q6PB30 78 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 ORMDL3Q8N138 153 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 MT1MQ8N339 61 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 KCNRGQ8N5I3 272 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 DSCR8Q96T75 97 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 CST9LQ9H4G1 147 aa0.66□□□□□ -2.3
USH2A-204ENST00000481786 A0A1B0GW15 77 aa0.65□□□□□ -2.31
USH2A-204ENST00000481786 K7EN84 100 aa0.65□□□□□ -2.31
USH2A-204ENST00000481786 NDUFC2O95298 119 aa0.65□□□□□ -2.31
USH2A-204ENST00000481786 SMIM13P0DJ93 91 aa0.65□□□□□ -2.31
USH2A-204ENST00000481786 ELOF1P60002 83 aaKnown RBP0.65□□□□□ -2.31
USH2A-204ENST00000481786 IFITM3Q01628 133 aa0.65□□□□□ -2.31
USH2A-204ENST00000481786 COMMD7Q86VX2 200 aa0.65□□□□□ -2.31
USH2A-204ENST00000481786 MBD3L1Q8WWY6 194 aa0.65□□□□□ -2.31
USH2A-204ENST00000481786 MAP1LC3CQ9BXW4 147 aa0.65□□□□□ -2.31
USH2A-204ENST00000481786 MANBALQ9NQG1 85 aa0.65□□□□□ -2.31
USH2A-204ENST00000481786 NHP2Q9NX24 153 aaKnown RBP0.65□□□□□ -2.31
USH2A-204ENST00000481786 TRAV13-2A0A0B4J235 113 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 LINC01549A6NIU2 74 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 A8MUN3 132 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 UMAD1C9J7I0 102 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 F8W036 122 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 COX7BP24311 80 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 S100A5P33763 92 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 KRTAP25-1Q3LHN0 102 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms