RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 ZNF815PA8K554 130 aa3.47□□□□□ -1.85
VPS50-215ENST00000480943 C3orf79P0CE67 100 aa3.47□□□□□ -1.85
VPS50-215ENST00000480943 CTAG1AP78358 180 aa3.47□□□□□ -1.85
VPS50-215ENST00000480943 MOBPQ13875 183 aa3.47□□□□□ -1.85
VPS50-215ENST00000480943 JOSD1Q15040 202 aaPredicted RBP3.47□□□□□ -1.85
VPS50-215ENST00000480943 TPRXLQ17RH7 258 aa3.47□□□□□ -1.85
VPS50-215ENST00000480943 LINC00483Q53H64 154 aa3.47□□□□□ -1.85
VPS50-215ENST00000480943 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
VPS50-215ENST00000480943 LINC00308Q8TCZ7 52 aa3.47□□□□□ -1.85
VPS50-215ENST00000480943 TTTY13Q9BZ97 58 aa3.47□□□□□ -1.85
VPS50-215ENST00000480943 ZNF73O43830 326 aaPredicted RBP3.46□□□□□ -1.86
VPS50-215ENST00000480943 TIMM17BO60830 172 aa3.46□□□□□ -1.86
VPS50-215ENST00000480943 KRTDAPP60985 99 aa3.46□□□□□ -1.86
VPS50-215ENST00000480943 C9orf153Q5TBE3 101 aa3.46□□□□□ -1.86
VPS50-215ENST00000480943 OR13C6PQ8NH95 151 aa3.46□□□□□ -1.86
VPS50-215ENST00000480943 SPANXCQ9NY87 97 aa3.46□□□□□ -1.86
VPS50-215ENST00000480943 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
VPS50-215ENST00000480943 HINT1P49773 126 aaPredicted RBP3.45□□□□□ -1.86
VPS50-215ENST00000480943 ST20-AS1Q8NBB2 130 aa3.45□□□□□ -1.86
VPS50-215ENST00000480943 A0A0U1RQV1 116 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 C20orf202A1L168 122 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 SPINK1P00995 79 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 COA6Q5JTJ3 125 aaKnown RBP3.44□□□□□ -1.86
VPS50-215ENST00000480943 SCGB1D4Q6XE38 83 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 FP248Q71RG6 208 aaPredicted RBP3.44□□□□□ -1.86
VPS50-215ENST00000480943 SSBP3-AS1Q7Z2R9 100 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 ATOH7Q8N100 152 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 SPANXDQ9BXN6 97 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 CBY1Q9Y3M2 126 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 MUC2Q02817 5179 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 FAT4Q6V0I7 4981 aa3.44□□□□□ -1.86
VPS50-215ENST00000480943 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
VPS50-215ENST00000480943 COX7BP24311 80 aa3.42□□□□□ -1.86
VPS50-215ENST00000480943 ELOF1P60002 83 aaKnown RBP3.42□□□□□ -1.86
VPS50-215ENST00000480943 RPS29P62273 56 aaKnown RBP3.42□□□□□ -1.86
VPS50-215ENST00000480943 C6orf99Q4VX62 202 aa3.42□□□□□ -1.86
VPS50-215ENST00000480943 PCP2Q8IVA1 136 aa3.41□□□□□ -1.86
VPS50-215ENST00000480943 LINC00518Q8N0U6 118 aa3.41□□□□□ -1.86
VPS50-215ENST00000480943 DHRS4-AS1Q9P1J3 65 aa3.41□□□□□ -1.86
VPS50-215ENST00000480943 A6NDN8 102 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 A8MU10 97 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 SLC25A20O43772 301 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 IFITM1P13164 125 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 SPRR1BP22528 89 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 SLC25A34Q6PIV7 304 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 HRCT1Q6UXD1 115 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 MUSTN1Q8IVN3 82 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 COPS9Q8WXC6 57 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 LAMTOR3Q9UHA4 124 aa3.4□□□□□ -1.87
VPS50-215ENST00000480943 S100A2P29034 98 aa3.39□□□□□ -1.87
VPS50-215ENST00000480943 AKR1D1P51857 326 aa3.39□□□□□ -1.87
VPS50-215ENST00000480943 TAL2Q16559 108 aa3.39□□□□□ -1.87
VPS50-215ENST00000480943 Q1RN00 199 aa3.39□□□□□ -1.87
VPS50-215ENST00000480943 Q6ZVH6 145 aa3.39□□□□□ -1.87
VPS50-215ENST00000480943 HIST3H2BBQ8N257 126 aa3.39□□□□□ -1.87
VPS50-215ENST00000480943 DEFB105AQ8NG35 78 aa3.39□□□□□ -1.87
VPS50-215ENST00000480943 A0A1B0GWB2 263 aa3.38□□□□□ -1.87
VPS50-215ENST00000480943 HIST1H2BLQ99880 126 aa3.38□□□□□ -1.87
VPS50-215ENST00000480943 LIMD2Q9BT23 127 aa3.38□□□□□ -1.87
VPS50-215ENST00000480943 TRBV7-6A0A0J9YX20 115 aa3.37□□□□□ -1.87
VPS50-215ENST00000480943 TEX49A0A1B0GTD5 131 aa3.37□□□□□ -1.87
VPS50-215ENST00000480943 HSBP1L1C9JCN9 74 aa3.37□□□□□ -1.87
VPS50-215ENST00000480943 ASB16-AS1Q495Z4 193 aa3.37□□□□□ -1.87
VPS50-215ENST00000480943 TRAV13-2A0A0B4J235 113 aa3.36□□□□□ -1.87
VPS50-215ENST00000480943 H7C2G1 150 aa3.36□□□□□ -1.87
VPS50-215ENST00000480943 S100A6P06703 90 aa3.36□□□□□ -1.87
VPS50-215ENST00000480943 S100A1P23297 94 aa3.36□□□□□ -1.87
VPS50-215ENST00000480943 SMIM11BQ8TCY0 68 aa3.36□□□□□ -1.87
VPS50-215ENST00000480943 PRO1933Q9H354 126 aa3.36□□□□□ -1.87
VPS50-215ENST00000480943 IGLV5-48A0A075B6I7 105 aa3.35□□□□□ -1.87
VPS50-215ENST00000480943 A0A0G2JQZ4 141 aa3.35□□□□□ -1.87
VPS50-215ENST00000480943 C9orf92A6NGG3 77 aa3.35□□□□□ -1.87
VPS50-215ENST00000480943 FAM218AQ96MZ4 157 aa3.35□□□□□ -1.87
VPS50-215ENST00000480943 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
VPS50-215ENST00000480943 NHP2Q9NX24 153 aaKnown RBP3.35□□□□□ -1.87
VPS50-215ENST00000480943 CD164Q04900 197 aa3.34□□□□□ -1.87
VPS50-215ENST00000480943 C12orf57Q99622 126 aa3.34□□□□□ -1.87
VPS50-215ENST00000480943 VAMP3Q15836 100 aa3.33□□□□□ -1.88
VPS50-215ENST00000480943 HIST1H4GQ99525 98 aa3.33□□□□□ -1.88
VPS50-215ENST00000480943 hADV29S1A0JD25 119 aa3.32□□□□□ -1.88
VPS50-215ENST00000480943 F8WEM9 126 aa3.32□□□□□ -1.88
VPS50-215ENST00000480943 LINC00575Q6W349 94 aa3.32□□□□□ -1.88
VPS50-215ENST00000480943 Q6ZQY7 126 aa3.32□□□□□ -1.88
VPS50-215ENST00000480943 COX8AP10176 69 aa3.31□□□□□ -1.88
VPS50-215ENST00000480943 PCOTHQ58A44 107 aa3.31□□□□□ -1.88
VPS50-215ENST00000480943 C1orf195Q5TG92 126 aa3.31□□□□□ -1.88
VPS50-215ENST00000480943 Q5XG85 94 aa3.3□□□□□ -1.88
VPS50-215ENST00000480943 IGLV8-61A0A075B6I0 122 aa3.29□□□□□ -1.88
VPS50-215ENST00000480943 PCP4L1A6NKN8 68 aa3.29□□□□□ -1.88
VPS50-215ENST00000480943 TCL1BO95988 128 aa3.29□□□□□ -1.88
VPS50-215ENST00000480943 SPATA45Q537H7 98 aa3.29□□□□□ -1.88
VPS50-215ENST00000480943 BVES-AS1Q5T3Y7 98 aa3.29□□□□□ -1.88
VPS50-215ENST00000480943 IGFL1Q6UW32 110 aa3.29□□□□□ -1.88
VPS50-215ENST00000480943 C14orf144Q96I85 54 aa3.29□□□□□ -1.88
VPS50-215ENST00000480943 DLEU1O43261 78 aa3.28□□□□□ -1.88
VPS50-215ENST00000480943 Q6JHZ5 121 aa3.28□□□□□ -1.88
VPS50-215ENST00000480943 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.28□□□□□ -1.88
VPS50-215ENST00000480943 CLEC2BQ92478 149 aa3.28□□□□□ -1.88
VPS50-215ENST00000480943 RAB37Q96AX2 223 aa3.28□□□□□ -1.88
VPS50-215ENST00000480943 TRBV7-7A0A0K0K1E9 115 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms