RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 DSCR8Q96T75 97 aa8.95□□□□□ -0.98
SNRNP200-205ENST00000480835 C14orf132Q9NPU4 83 aa8.95□□□□□ -0.98
SNRNP200-205ENST00000480835 LOC110117498A0A087WWA1 95 aa8.94□□□□□ -0.98
SNRNP200-205ENST00000480835 SMR3BP02814 79 aaPredicted RBP8.94□□□□□ -0.98
SNRNP200-205ENST00000480835 C3orf22Q8N5N4 141 aa8.93□□□□□ -0.98
SNRNP200-205ENST00000480835 IGLV8-61A0A075B6I0 122 aa8.92□□□□□ -0.98
SNRNP200-205ENST00000480835 TRBV7-4A0A0J9YYF1 115 aa8.92□□□□□ -0.98
SNRNP200-205ENST00000480835 A0A1B0GV72 72 aa8.92□□□□□ -0.98
SNRNP200-205ENST00000480835 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
SNRNP200-205ENST00000480835 CCKP06307 115 aa8.9□□□□□ -0.98
SNRNP200-205ENST00000480835 Q6ZQT0 140 aa8.9□□□□□ -0.98
SNRNP200-205ENST00000480835 FAM240AA0A1B0GVK7 77 aa8.89□□□□□ -0.99
SNRNP200-205ENST00000480835 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
SNRNP200-205ENST00000480835 PLA2G1BP04054 148 aaKnown RBP8.89□□□□□ -0.99
SNRNP200-205ENST00000480835 ACYP1P07311 99 aa8.88□□□□□ -0.99
SNRNP200-205ENST00000480835 Q6JHZ5 121 aa8.88□□□□□ -0.99
SNRNP200-205ENST00000480835 APOBP04114 4563 aaKnown RBP8.88□□□□□ -0.99
SNRNP200-205ENST00000480835 KRTAP10-4P60372 401 aaPredicted RBP8.87□□□□□ -0.99
SNRNP200-205ENST00000480835 FAM229BQ4G0N7 80 aa8.86□□□□□ -0.99
SNRNP200-205ENST00000480835 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
SNRNP200-205ENST00000480835 A0A1B0GW54 56 aa8.83□□□□□ -1
SNRNP200-205ENST00000480835 IGFL1Q6UW32 110 aa8.83□□□□□ -1
SNRNP200-205ENST00000480835 Q8NBF4 154 aa8.83□□□□□ -1
SNRNP200-205ENST00000480835 C9orf153Q5TBE3 101 aa8.82□□□□□ -1
SNRNP200-205ENST00000480835 ANAPC11Q9NYG5 84 aa8.82□□□□□ -1
SNRNP200-205ENST00000480835 VPS25Q9BRG1 176 aa8.81□□□□□ -1
SNRNP200-205ENST00000480835 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
SNRNP200-205ENST00000480835 Q5VSD8 79 aa8.8□□□□□ -1
SNRNP200-205ENST00000480835 VPS13BQ7Z7G8 4022 aa8.79□□□□□ -1
SNRNP200-205ENST00000480835 A0A1W2PNM2 257 aa8.79□□□□□ -1
SNRNP200-205ENST00000480835 CRYGAP11844 174 aa8.79□□□□□ -1
SNRNP200-205ENST00000480835 MOBPQ13875 183 aa8.79□□□□□ -1
SNRNP200-205ENST00000480835 SSBP3-AS1Q7Z2R9 100 aa8.79□□□□□ -1
SNRNP200-205ENST00000480835 Q6Q795 121 aa8.78□□□□□ -1
SNRNP200-205ENST00000480835 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1.01
SNRNP200-205ENST00000480835 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
SNRNP200-205ENST00000480835 Q8N1X5 172 aa8.75□□□□□ -1.01
SNRNP200-205ENST00000480835 RYR1P21817 5038 aa8.74□□□□□ -1.01
SNRNP200-205ENST00000480835 A0A087X002 238 aa8.74□□□□□ -1.01
SNRNP200-205ENST00000480835 KRTAP13-2Q52LG2 175 aa8.74□□□□□ -1.01
SNRNP200-205ENST00000480835 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
SNRNP200-205ENST00000480835 A0A0G2JQZ4 141 aa8.73□□□□□ -1.01
SNRNP200-205ENST00000480835 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
SNRNP200-205ENST00000480835 CD164Q04900 197 aa8.72□□□□□ -1.01
SNRNP200-205ENST00000480835 TRBV7-7A0A0K0K1E9 115 aa8.7□□□□□ -1.02
SNRNP200-205ENST00000480835 LINC00643Q86TS7 51 aa8.7□□□□□ -1.02
SNRNP200-205ENST00000480835 TYMSOSQ8TAI1 123 aa8.69□□□□□ -1.02
SNRNP200-205ENST00000480835 HSPG2P98160 4391 aa8.69□□□□□ -1.02
SNRNP200-205ENST00000480835 EPPK1P58107 5090 aaKnown RBP8.68□□□□□ -1.02
SNRNP200-205ENST00000480835 NREPQ16612 68 aa8.68□□□□□ -1.02
SNRNP200-205ENST00000480835 Q6ZVQ6 151 aa8.68□□□□□ -1.02
SNRNP200-205ENST00000480835 FAT1Q14517 4588 aa8.67□□□□□ -1.02
SNRNP200-205ENST00000480835 A0A087WSZ3 146 aa8.67□□□□□ -1.02
SNRNP200-205ENST00000480835 PKHD1L1Q86WI1 4243 aa8.67□□□□□ -1.02
SNRNP200-205ENST00000480835 PRR26Q8N8Z3 221 aa8.67□□□□□ -1.02
SNRNP200-205ENST00000480835 SS18L2Q9UHA2 77 aa8.66□□□□□ -1.02
SNRNP200-205ENST00000480835 ATP5EP2Q5VTU8 51 aa8.65□□□□□ -1.02
SNRNP200-205ENST00000480835 HRCT1Q6UXD1 115 aa8.64□□□□□ -1.03
SNRNP200-205ENST00000480835 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
SNRNP200-205ENST00000480835 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
SNRNP200-205ENST00000480835 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
SNRNP200-205ENST00000480835 SPAG11AQ6PDA7 123 aa8.62□□□□□ -1.03
SNRNP200-205ENST00000480835 SIGMAR1Q99720 223 aa8.62□□□□□ -1.03
SNRNP200-205ENST00000480835 CXCL6P80162 114 aa8.6□□□□□ -1.03
SNRNP200-205ENST00000480835 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
SNRNP200-205ENST00000480835 Q5XG85 94 aa8.59□□□□□ -1.03
SNRNP200-205ENST00000480835 LINC00304Q8N9R0 145 aa8.59□□□□□ -1.03
SNRNP200-205ENST00000480835 BPY2O14599 106 aa8.58□□□□□ -1.04
SNRNP200-205ENST00000480835 SPINK1P00995 79 aa8.58□□□□□ -1.04
SNRNP200-205ENST00000480835 ASB16-AS1Q495Z4 193 aa8.58□□□□□ -1.04
SNRNP200-205ENST00000480835 LIMD2Q9BT23 127 aa8.58□□□□□ -1.04
SNRNP200-205ENST00000480835 RPS29P62273 56 aaKnown RBP8.57□□□□□ -1.04
SNRNP200-205ENST00000480835 IGKV3D-7A0A0C4DH55 119 aa8.56□□□□□ -1.04
SNRNP200-205ENST00000480835 J3KT08 172 aa8.56□□□□□ -1.04
SNRNP200-205ENST00000480835 IMUPQ9GZP8 106 aa8.56□□□□□ -1.04
SNRNP200-205ENST00000480835 LINC00472Q9H8W2 130 aa8.56□□□□□ -1.04
SNRNP200-205ENST00000480835 KRTAP10-8P60410 259 aa8.54□□□□□ -1.04
SNRNP200-205ENST00000480835 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
SNRNP200-205ENST00000480835 Q96NJ1 140 aa8.52□□□□□ -1.05
SNRNP200-205ENST00000480835 OXTP01178 125 aa8.51□□□□□ -1.05
SNRNP200-205ENST00000480835 IGKV4-1P06312 121 aa8.48□□□□□ -1.05
SNRNP200-205ENST00000480835 DSCR10P59022 87 aa8.48□□□□□ -1.05
SNRNP200-205ENST00000480835 DEFB116Q30KQ4 102 aa8.48□□□□□ -1.05
SNRNP200-205ENST00000480835 HIST1H4AP62805 103 aaKnown RBP8.47□□□□□ -1.05
SNRNP200-205ENST00000480835 KRTAP4-5Q9BYR2 181 aa8.47□□□□□ -1.05
SNRNP200-205ENST00000480835 A8MWP4 228 aa8.46□□□□□ -1.06
SNRNP200-205ENST00000480835 NDUFB1O75438 58 aa8.46□□□□□ -1.06
SNRNP200-205ENST00000480835 C1orf195Q5TG92 126 aa8.45□□□□□ -1.06
SNRNP200-205ENST00000480835 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
SNRNP200-205ENST00000480835 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
SNRNP200-205ENST00000480835 KRTAP29-1A8MX34 341 aaPredicted RBP8.42□□□□□ -1.06
SNRNP200-205ENST00000480835 K7EQZ3 153 aa8.42□□□□□ -1.06
SNRNP200-205ENST00000480835 SCGB1A1P11684 91 aa8.42□□□□□ -1.06
SNRNP200-205ENST00000480835 PRR15Q8IV56 129 aa8.42□□□□□ -1.06
SNRNP200-205ENST00000480835 Q8N9L7 120 aa8.42□□□□□ -1.06
SNRNP200-205ENST00000480835 A0A087WVE0 104 aa8.4□□□□□ -1.06
SNRNP200-205ENST00000480835 FAT3Q8TDW7 4589 aa8.39□□□□□ -1.07
SNRNP200-205ENST00000480835 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
SNRNP200-205ENST00000480835 HERC2O95714 4834 aa8.37□□□□□ -1.07
SNRNP200-205ENST00000480835 FAM236AA0A1B0GUQ0 79 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms