RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 Q8N1X5 172 aa10.56□□□□□ -0.72
UPF3A-206ENST00000480362 SMIM29Q86T20 159 aa10.55□□□□□ -0.72
UPF3A-206ENST00000480362 C3orf22Q8N5N4 141 aa10.55□□□□□ -0.72
UPF3A-206ENST00000480362 LAMTOR3Q9UHA4 124 aa10.55□□□□□ -0.72
UPF3A-206ENST00000480362 LINC00483Q53H64 154 aa10.54□□□□□ -0.72
UPF3A-206ENST00000480362 ANAPC11Q9NYG5 84 aa10.54□□□□□ -0.72
UPF3A-206ENST00000480362 HSPG2P98160 4391 aa10.54□□□□□ -0.72
UPF3A-206ENST00000480362 A0A1B0GV72 72 aa10.51□□□□□ -0.73
UPF3A-206ENST00000480362 ETDBQ3ZM63 59 aa10.51□□□□□ -0.73
UPF3A-206ENST00000480362 TEN1Q86WV5 123 aa10.49□□□□□ -0.73
UPF3A-206ENST00000480362 FAT1Q14517 4588 aa10.49□□□□□ -0.73
UPF3A-206ENST00000480362 KIAA1109Q2LD37 5005 aa10.49□□□□□ -0.73
UPF3A-206ENST00000480362 KRTAP1-4P0C5Y4 121 aa10.48□□□□□ -0.73
UPF3A-206ENST00000480362 F8WEM9 126 aa10.47□□□□□ -0.73
UPF3A-206ENST00000480362 JMJD7-PLA2G4BH0Y9G9 81 aa10.47□□□□□ -0.73
UPF3A-206ENST00000480362 OBSCN-AS1Q96MR7 158 aa10.47□□□□□ -0.73
UPF3A-206ENST00000480362 SRRM2Q9UQ35 2752 aaKnown RBP10.46□□□□□ -0.73
UPF3A-206ENST00000480362 RBM3P98179 157 aaKnown RBP10.46□□□□□ -0.73
UPF3A-206ENST00000480362 IGLV9-49A0A0B4J1Y8 123 aa10.45□□□□□ -0.74
UPF3A-206ENST00000480362 FAM229BQ4G0N7 80 aa10.45□□□□□ -0.74
UPF3A-206ENST00000480362 C14orf132Q9NPU4 83 aa10.43□□□□□ -0.74
UPF3A-206ENST00000480362 IGLV8-61A0A075B6I0 122 aa10.42□□□□□ -0.74
UPF3A-206ENST00000480362 A0A087X002 238 aa10.42□□□□□ -0.74
UPF3A-206ENST00000480362 C9orf153Q5TBE3 101 aa10.42□□□□□ -0.74
UPF3A-206ENST00000480362 HERC2O95714 4834 aa10.42□□□□□ -0.74
UPF3A-206ENST00000480362 CRYGAP11844 174 aa10.41□□□□□ -0.74
UPF3A-206ENST00000480362 DSCR8Q96T75 97 aa10.41□□□□□ -0.74
UPF3A-206ENST00000480362 MOBPQ13875 183 aa10.4□□□□□ -0.74
UPF3A-206ENST00000480362 PKHD1L1Q86WI1 4243 aa10.39□□□□□ -0.75
UPF3A-206ENST00000480362 TRBV7-4A0A0J9YYF1 115 aa10.39□□□□□ -0.75
UPF3A-206ENST00000480362 KRTAP13-2Q52LG2 175 aa10.39□□□□□ -0.75
UPF3A-206ENST00000480362 A0A0G2JQZ4 141 aa10.38□□□□□ -0.75
UPF3A-206ENST00000480362 Q8NBF4 154 aa10.38□□□□□ -0.75
UPF3A-206ENST00000480362 LOC110117498A0A087WWA1 95 aa10.37□□□□□ -0.75
UPF3A-206ENST00000480362 Q6JHZ5 121 aa10.37□□□□□ -0.75
UPF3A-206ENST00000480362 IGFL1Q6UW32 110 aa10.37□□□□□ -0.75
UPF3A-206ENST00000480362 KRTAP4-5Q9BYR2 181 aa10.37□□□□□ -0.75
UPF3A-206ENST00000480362 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
UPF3A-206ENST00000480362 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
UPF3A-206ENST00000480362 PRR26Q8N8Z3 221 aa10.36□□□□□ -0.75
UPF3A-206ENST00000480362 PDE6GP18545 87 aa10.35□□□□□ -0.75
UPF3A-206ENST00000480362 Q6ZQT0 140 aa10.35□□□□□ -0.75
UPF3A-206ENST00000480362 SSBP3-AS1Q7Z2R9 100 aa10.35□□□□□ -0.75
UPF3A-206ENST00000480362 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
UPF3A-206ENST00000480362 CCKP06307 115 aa10.32□□□□□ -0.76
UPF3A-206ENST00000480362 VPS25Q9BRG1 176 aa10.31□□□□□ -0.76
UPF3A-206ENST00000480362 A0A1W2PNM2 257 aa10.3□□□□□ -0.76
UPF3A-206ENST00000480362 C21orf62-AS1Q17RA5 79 aa10.27□□□□□ -0.77
UPF3A-206ENST00000480362 HRCT1Q6UXD1 115 aa10.27□□□□□ -0.77
UPF3A-206ENST00000480362 Q6Q795 121 aa10.25□□□□□ -0.77
UPF3A-206ENST00000480362 J3QR89 54 aa10.24□□□□□ -0.77
UPF3A-206ENST00000480362 KRTAP10-8P60410 259 aa10.23□□□□□ -0.77
UPF3A-206ENST00000480362 CD164Q04900 197 aa10.22□□□□□ -0.77
UPF3A-206ENST00000480362 TRBV7-7A0A0K0K1E9 115 aa10.21□□□□□ -0.77
UPF3A-206ENST00000480362 C4orf48Q5BLP8 95 aa10.2□□□□□ -0.78
UPF3A-206ENST00000480362 LINC00304Q8N9R0 145 aa10.2□□□□□ -0.78
UPF3A-206ENST00000480362 A0A1B0GW54 56 aa10.19□□□□□ -0.78
UPF3A-206ENST00000480362 K7ERU9 68 aa10.19□□□□□ -0.78
UPF3A-206ENST00000480362 A0A087WSZ3 146 aa10.18□□□□□ -0.78
UPF3A-206ENST00000480362 OXTP01178 125 aa10.18□□□□□ -0.78
UPF3A-206ENST00000480362 ACYP1P07311 99 aa10.18□□□□□ -0.78
UPF3A-206ENST00000480362 FAM240AA0A1B0GVK7 77 aa10.17□□□□□ -0.78
UPF3A-206ENST00000480362 LINC00846Q9NV44 126 aa10.17□□□□□ -0.78
UPF3A-206ENST00000480362 SPAG11AQ6PDA7 123 aa10.16□□□□□ -0.78
UPF3A-206ENST00000480362 FLG2Q5D862 2391 aaPredicted RBP10.14□□□□□ -0.79
UPF3A-206ENST00000480362 SPINK1P00995 79 aa10.14□□□□□ -0.79
UPF3A-206ENST00000480362 MT1HL1P0DM35 61 aa10.14□□□□□ -0.79
UPF3A-206ENST00000480362 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
UPF3A-206ENST00000480362 FAT3Q8TDW7 4589 aa10.11□□□□□ -0.79
UPF3A-206ENST00000480362 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
UPF3A-206ENST00000480362 NREPQ16612 68 aa10.1□□□□□ -0.79
UPF3A-206ENST00000480362 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
UPF3A-206ENST00000480362 Q6ZVQ6 151 aa10.09□□□□□ -0.79
UPF3A-206ENST00000480362 UBL5Q9BZL1 73 aa10.09□□□□□ -0.79
UPF3A-206ENST00000480362 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
UPF3A-206ENST00000480362 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
UPF3A-206ENST00000480362 Q5XG85 94 aa10.07□□□□□ -0.8
UPF3A-206ENST00000480362 ABCA13Q86UQ4 5058 aa10.05□□□□□ -0.8
UPF3A-206ENST00000480362 CDIP1Q9H305 208 aa10.05□□□□□ -0.8
UPF3A-206ENST00000480362 TNXBP22105 4242 aa10.05□□□□□ -0.8
UPF3A-206ENST00000480362 ASB16-AS1Q495Z4 193 aa10.04□□□□□ -0.8
UPF3A-206ENST00000480362 LINC00472Q9H8W2 130 aa10.03□□□□□ -0.8
UPF3A-206ENST00000480362 PCLOQ9Y6V0 5065 aa10.02□□□□□ -0.8
UPF3A-206ENST00000480362 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.81
UPF3A-206ENST00000480362 Q96NJ1 140 aa10.01□□□□□ -0.81
UPF3A-206ENST00000480362 J3QL48 77 aa10□□□□□ -0.81
UPF3A-206ENST00000480362 C1orf195Q5TG92 126 aa9.99□□□□□ -0.81
UPF3A-206ENST00000480362 LINC00643Q86TS7 51 aa9.99□□□□□ -0.81
UPF3A-206ENST00000480362 MYCBP2O75592 4640 aa9.99□□□□□ -0.81
UPF3A-206ENST00000480362 BPY2O14599 106 aa9.97□□□□□ -0.81
UPF3A-206ENST00000480362 SIGMAR1Q99720 223 aa9.97□□□□□ -0.81
UPF3A-206ENST00000480362 IGKV4-1P06312 121 aa9.96□□□□□ -0.82
UPF3A-206ENST00000480362 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
UPF3A-206ENST00000480362 J3KT08 172 aa9.94□□□□□ -0.82
UPF3A-206ENST00000480362 RETNLBQ9BQ08 111 aa9.93□□□□□ -0.82
UPF3A-206ENST00000480362 DSCR10P59022 87 aa9.92□□□□□ -0.82
UPF3A-206ENST00000480362 CXCL6P80162 114 aa9.91□□□□□ -0.82
UPF3A-206ENST00000480362 ATP5EP2Q5VTU8 51 aa9.91□□□□□ -0.82
UPF3A-206ENST00000480362 DMBT1Q9UGM3 2413 aaPredicted RBP9.89□□□□□ -0.83
UPF3A-206ENST00000480362 MT-ATP8P03928 68 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms