RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 VPS13BQ7Z7G8 4022 aa-0.96□□□□□ -2.56
SPC25-204ENST00000479309 NDUFB1O75438 58 aa-0.96□□□□□ -2.56
SPC25-204ENST00000479309 C20orf78Q9BR46 151 aa-0.96□□□□□ -2.56
SPC25-204ENST00000479309 DOT1LQ8TEK3 1739 aa-0.96□□□□□ -2.56
SPC25-204ENST00000479309 TMEM131LA2VDJ0 1609 aa-0.97□□□□□ -2.56
SPC25-204ENST00000479309 MYMXA0A1B0GTQ4 84 aa-0.97□□□□□ -2.56
SPC25-204ENST00000479309 PLIN4Q96Q06 1357 aa-0.97□□□□□ -2.57
SPC25-204ENST00000479309 MAGI3Q5TCQ9 1506 aa-0.98□□□□□ -2.57
SPC25-204ENST00000479309 LRRK2Q5S007 2527 aa-0.98□□□□□ -2.57
SPC25-204ENST00000479309 ANK3Q12955 4377 aaKnown RBP-0.99□□□□□ -2.57
SPC25-204ENST00000479309 S100A8P05109 93 aa-0.99□□□□□ -2.57
SPC25-204ENST00000479309 PRLHP81277 87 aa-0.99□□□□□ -2.57
SPC25-204ENST00000479309 SNHG12Q9BXW3 62 aa-0.99□□□□□ -2.57
SPC25-204ENST00000479309 URB2Q14146 1524 aaKnown RBP-0.99□□□□□ -2.57
SPC25-204ENST00000479309 TEX15Q9BXT5 2789 aa-1.01□□□□□ -2.57
SPC25-204ENST00000479309 LCE6AA0A183 80 aa-1.01□□□□□ -2.57
SPC25-204ENST00000479309 PKIAP61925 76 aa-1.01□□□□□ -2.57
SPC25-204ENST00000479309 RABAC1Q9UI14 185 aa-1.01□□□□□ -2.57
SPC25-204ENST00000479309 S4R3F8 94 aa-1.01□□□□□ -2.57
SPC25-204ENST00000479309 CCDC88BA6NC98 1476 aa-1.01□□□□□ -2.57
SPC25-204ENST00000479309 ABCC3O15438 1527 aa-1.01□□□□□ -2.57
SPC25-204ENST00000479309 DIP2BQ9P265 1576 aa-1.01□□□□□ -2.57
SPC25-204ENST00000479309 CEBPZOSA8MTT3 80 aa-1.02□□□□□ -2.57
SPC25-204ENST00000479309 H0YAA0 97 aa-1.02□□□□□ -2.57
SPC25-204ENST00000479309 TRIOO75962 3097 aa-1.02□□□□□ -2.57
SPC25-204ENST00000479309 SNRPFP62306 86 aaKnown RBP-1.02□□□□□ -2.57
SPC25-204ENST00000479309 NCOA2Q15596 1464 aa-1.02□□□□□ -2.57
SPC25-204ENST00000479309 ZNF831Q5JPB2 1677 aa-1.02□□□□□ -2.57
SPC25-204ENST00000479309 MAP3K4Q9Y6R4 1608 aa-1.02□□□□□ -2.57
SPC25-204ENST00000479309 LAMA2P24043 3122 aaKnown RBP-1.02□□□□□ -2.57
SPC25-204ENST00000479309 ACACAQ13085 2346 aa-1.03□□□□□ -2.57
SPC25-204ENST00000479309 ARFGEF2Q9Y6D5 1785 aa-1.03□□□□□ -2.57
SPC25-204ENST00000479309 DDX60LQ5H9U9 1706 aaKnown RBP-1.03□□□□□ -2.57
SPC25-204ENST00000479309 RYR3Q15413 4870 aa-1.03□□□□□ -2.57
SPC25-204ENST00000479309 APOBP04114 4563 aaKnown RBP-1.03□□□□□ -2.57
SPC25-204ENST00000479309 NBEAL2Q6ZNJ1 2754 aa-1.03□□□□□ -2.57
SPC25-204ENST00000479309 CCNB3Q8WWL7 1395 aa-1.03□□□□□ -2.57
SPC25-204ENST00000479309 LYNX1G3V0Z9 82 aa-1.03□□□□□ -2.57
SPC25-204ENST00000479309 PYY3Q5JQD4 70 aa-1.03□□□□□ -2.57
SPC25-204ENST00000479309 LINC00643Q86TS7 51 aa-1.03□□□□□ -2.57
SPC25-204ENST00000479309 PKD1L2Q7Z442 2459 aa-1.04□□□□□ -2.58
SPC25-204ENST00000479309 PIK3C2BO00750 1634 aa-1.04□□□□□ -2.58
SPC25-204ENST00000479309 KIF14Q15058 1648 aa-1.04□□□□□ -2.58
SPC25-204ENST00000479309 A0A0C4DFX4 3053 aa-1.04□□□□□ -2.58
SPC25-204ENST00000479309 ACYP1P07311 99 aa-1.04□□□□□ -2.58
SPC25-204ENST00000479309 CEP290O15078 2479 aa-1.04□□□□□ -2.58
SPC25-204ENST00000479309 THOC2Q8NI27 1593 aaKnown RBP-1.04□□□□□ -2.58
SPC25-204ENST00000479309 IFI6P09912 130 aa-1.05□□□□□ -2.58
SPC25-204ENST00000479309 IFI27P40305 119 aaPredicted RBP-1.05□□□□□ -2.58
SPC25-204ENST00000479309 DEFB110Q30KQ9 67 aa-1.05□□□□□ -2.58
SPC25-204ENST00000479309 RANBP2P49792 3224 aaKnown RBP-1.05□□□□□ -2.58
SPC25-204ENST00000479309 NIPBLQ6KC79 2804 aaeCLIP-1.06□□□□□ -2.58
SPC25-204ENST00000479309 FAM186AA6NE01 2351 aa-1.06□□□□□ -2.58
SPC25-204ENST00000479309 BIRC6Q9NR09 4857 aa-1.06□□□□□ -2.58
SPC25-204ENST00000479309 DNAH11Q96DT5 4516 aa-1.06□□□□□ -2.58
SPC25-204ENST00000479309 K7EP34 96 aa-1.06□□□□□ -2.58
SPC25-204ENST00000479309 DEFB130BP0DP73 79 aa-1.06□□□□□ -2.58
SPC25-204ENST00000479309 DEFB130AP0DP74 79 aa-1.06□□□□□ -2.58
SPC25-204ENST00000479309 IAPPP10997 89 aa-1.06□□□□□ -2.58
SPC25-204ENST00000479309 DEFA5Q01523 94 aa-1.06□□□□□ -2.58
SPC25-204ENST00000479309 S100A16Q96FQ6 103 aaKnown RBP-1.06□□□□□ -2.58
SPC25-204ENST00000479309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.06□□□□□ -2.58
SPC25-204ENST00000479309 RYR1P21817 5038 aa-1.07□□□□□ -2.58
SPC25-204ENST00000479309 ACACBO00763 2458 aa-1.07□□□□□ -2.58
SPC25-204ENST00000479309 UMAD1C9J7I0 102 aa-1.07□□□□□ -2.58
SPC25-204ENST00000479309 MT1HP80294 61 aa-1.07□□□□□ -2.58
SPC25-204ENST00000479309 DEFB106AQ8N104 65 aa-1.07□□□□□ -2.58
SPC25-204ENST00000479309 Q9H521 79 aa-1.07□□□□□ -2.58
SPC25-204ENST00000479309 PPLO60437 1756 aa-1.07□□□□□ -2.58
SPC25-204ENST00000479309 PLCH1Q4KWH8 1693 aa-1.07□□□□□ -2.58
SPC25-204ENST00000479309 LAMA3Q16787 3333 aa-1.07□□□□□ -2.58
SPC25-204ENST00000479309 FRYQ5TBA9 3013 aa-1.08□□□□□ -2.58
SPC25-204ENST00000479309 HYDINQ4G0P3 5121 aa-1.08□□□□□ -2.58
SPC25-204ENST00000479309 TTC37Q6PGP7 1564 aa-1.08□□□□□ -2.58
SPC25-204ENST00000479309 RELNP78509 3460 aa-1.09□□□□□ -2.58
SPC25-204ENST00000479309 ITSN1Q15811 1721 aa-1.09□□□□□ -2.58
SPC25-204ENST00000479309 CFAP43Q8NDM7 1665 aa-1.09□□□□□ -2.58
SPC25-204ENST00000479309 PVALEFA0A1B0GWK0 134 aa-1.09□□□□□ -2.58
SPC25-204ENST00000479309 NDUFA4O00483 81 aa-1.09□□□□□ -2.58
SPC25-204ENST00000479309 V9GYS6 101 aa-1.09□□□□□ -2.58
SPC25-204ENST00000479309 CCDC168Q8NDH2 2452 aa-1.1□□□□□ -2.59
SPC25-204ENST00000479309 KIAA1109Q2LD37 5005 aa-1.11□□□□□ -2.59
SPC25-204ENST00000479309 ATP5EP2Q5VTU8 51 aa-1.11□□□□□ -2.59
SPC25-204ENST00000479309 ANKRD36CQ5JPF3 1778 aa-1.11□□□□□ -2.59
SPC25-204ENST00000479309 DNAH1Q9P2D7 4330 aa-1.11□□□□□ -2.59
SPC25-204ENST00000479309 DNAH2Q9P225 4427 aa-1.12□□□□□ -2.59
SPC25-204ENST00000479309 ZC3H13Q5T200 1668 aaKnown RBP-1.12□□□□□ -2.59
SPC25-204ENST00000479309 KANTRA0A1W2PQU2 76 aa-1.12□□□□□ -2.59
SPC25-204ENST00000479309 HMGA1P17096 107 aaKnown RBP-1.12□□□□□ -2.59
SPC25-204ENST00000479309 DEFB1P60022 68 aa-1.12□□□□□ -2.59
SPC25-204ENST00000479309 NREPQ16612 68 aa-1.12□□□□□ -2.59
SPC25-204ENST00000479309 KIAA0586Q9BVV6 1533 aa-1.13□□□□□ -2.59
SPC25-204ENST00000479309 RICTORQ6R327 1708 aa-1.13□□□□□ -2.59
SPC25-204ENST00000479309 DEFB131BA0A096LNP1 70 aa-1.14□□□□□ -2.59
SPC25-204ENST00000479309 MRPL33O75394 65 aaKnown RBP-1.14□□□□□ -2.59
SPC25-204ENST00000479309 KRTAP19-5Q3LI72 72 aa-1.14□□□□□ -2.59
SPC25-204ENST00000479309 ITPR1Q14643 2758 aa-1.14□□□□□ -2.59
SPC25-204ENST00000479309 C5orf42Q9H799 3197 aa-1.14□□□□□ -2.59
SPC25-204ENST00000479309 PARP4Q9UKK3 1724 aaKnown RBP-1.15□□□□□ -2.59
SPC25-204ENST00000479309 ITSN2Q9NZM3 1697 aa-1.15□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms