RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
CHD3-210ENST00000479080 ZNF706Q9Y5V0 76 aaPredicted RBP7.76□□□□□ -1.17
CHD3-210ENST00000479080 TEX49A0A1B0GTD5 131 aa7.75□□□□□ -1.17
CHD3-210ENST00000479080 C9JAW5 83 aa7.75□□□□□ -1.17
CHD3-210ENST00000479080 DNAL4O96015 105 aa7.74□□□□□ -1.17
CHD3-210ENST00000479080 ORMDL1Q9P0S3 153 aa7.74□□□□□ -1.17
CHD3-210ENST00000479080 PRR26Q8N8Z3 221 aa7.73□□□□□ -1.17
CHD3-210ENST00000479080 FAM229BQ4G0N7 80 aa7.72□□□□□ -1.17
CHD3-210ENST00000479080 OCIAD2Q56VL3 154 aa7.72□□□□□ -1.17
CHD3-210ENST00000479080 FLG2Q5D862 2391 aaPredicted RBP7.72□□□□□ -1.17
CHD3-210ENST00000479080 BAALC-AS2P0C853 105 aa7.71□□□□□ -1.18
CHD3-210ENST00000479080 PPDPFLQ8WWR9 84 aa7.71□□□□□ -1.18
CHD3-210ENST00000479080 SNCGO76070 127 aa7.7□□□□□ -1.18
CHD3-210ENST00000479080 MT1HL1P0DM35 61 aa7.7□□□□□ -1.18
CHD3-210ENST00000479080 LINC01600Q96MT4 127 aa7.7□□□□□ -1.18
CHD3-210ENST00000479080 HERC1Q15751 4861 aa7.7□□□□□ -1.18
CHD3-210ENST00000479080 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
CHD3-210ENST00000479080 GTF2H5Q6ZYL4 71 aa7.69□□□□□ -1.18
CHD3-210ENST00000479080 IGLV9-49A0A0B4J1Y8 123 aa7.68□□□□□ -1.18
CHD3-210ENST00000479080 A0A0G2JQZ4 141 aa7.68□□□□□ -1.18
CHD3-210ENST00000479080 H3BT86 120 aa7.68□□□□□ -1.18
CHD3-210ENST00000479080 NDUFV3P56181 108 aaKnown RBP7.68□□□□□ -1.18
CHD3-210ENST00000479080 KRTAP10-8P60410 259 aa7.68□□□□□ -1.18
CHD3-210ENST00000479080 UBE2V1Q13404 147 aa7.68□□□□□ -1.18
CHD3-210ENST00000479080 IGLV8-61A0A075B6I0 122 aa7.67□□□□□ -1.18
CHD3-210ENST00000479080 TMEM256-PLSCR3K7ERE1 68 aa7.67□□□□□ -1.18
CHD3-210ENST00000479080 CRYGAP11844 174 aa7.67□□□□□ -1.18
CHD3-210ENST00000479080 MOBPQ13875 183 aa7.67□□□□□ -1.18
CHD3-210ENST00000479080 ANKRD29Q8N6D5 301 aa7.67□□□□□ -1.18
CHD3-210ENST00000479080 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
CHD3-210ENST00000479080 A0A1B0GV72 72 aa7.66□□□□□ -1.18
CHD3-210ENST00000479080 H3BQ85 93 aa7.64□□□□□ -1.19
CHD3-210ENST00000479080 Q8NBF4 154 aa7.64□□□□□ -1.19
CHD3-210ENST00000479080 OBSCN-AS1Q96MR7 158 aa7.64□□□□□ -1.19
CHD3-210ENST00000479080 C9orf153Q5TBE3 101 aa7.63□□□□□ -1.19
CHD3-210ENST00000479080 IGFL1Q6UW32 110 aa7.63□□□□□ -1.19
CHD3-210ENST00000479080 KRTAP29-1A8MX34 341 aaPredicted RBP7.62□□□□□ -1.19
CHD3-210ENST00000479080 OXTP01178 125 aa7.62□□□□□ -1.19
CHD3-210ENST00000479080 TYMSOSQ8TAI1 123 aa7.62□□□□□ -1.19
CHD3-210ENST00000479080 GHRHP01286 108 aa7.61□□□□□ -1.19
CHD3-210ENST00000479080 TRBV7-4A0A0J9YYF1 115 aa7.6□□□□□ -1.19
CHD3-210ENST00000479080 F8W1H4 67 aa7.6□□□□□ -1.19
CHD3-210ENST00000479080 SSBP3-AS1Q7Z2R9 100 aa7.6□□□□□ -1.19
CHD3-210ENST00000479080 F8WEM9 126 aa7.59□□□□□ -1.19
CHD3-210ENST00000479080 A0A1W2PNM2 257 aa7.58□□□□□ -1.2
CHD3-210ENST00000479080 ETDBQ3ZM63 59 aa7.57□□□□□ -1.2
CHD3-210ENST00000479080 C14orf132Q9NPU4 83 aa7.57□□□□□ -1.2
CHD3-210ENST00000479080 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
CHD3-210ENST00000479080 Q6JHZ5 121 aa7.56□□□□□ -1.2
CHD3-210ENST00000479080 JMJD7-PLA2G4BH0Y9G9 81 aa7.55□□□□□ -1.2
CHD3-210ENST00000479080 Q6ZQT0 140 aa7.55□□□□□ -1.2
CHD3-210ENST00000479080 TEN1Q86WV5 123 aa7.55□□□□□ -1.2
CHD3-210ENST00000479080 LOC110117498A0A087WWA1 95 aa7.54□□□□□ -1.2
CHD3-210ENST00000479080 HRCT1Q6UXD1 115 aa7.54□□□□□ -1.2
CHD3-210ENST00000479080 LINC00304Q8N9R0 145 aa7.54□□□□□ -1.2
CHD3-210ENST00000479080 Q6Q795 121 aa7.52□□□□□ -1.21
CHD3-210ENST00000479080 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
CHD3-210ENST00000479080 TRBV7-7A0A0K0K1E9 115 aa7.5□□□□□ -1.21
CHD3-210ENST00000479080 CCKP06307 115 aa7.5□□□□□ -1.21
CHD3-210ENST00000479080 CD164Q04900 197 aa7.5□□□□□ -1.21
CHD3-210ENST00000479080 DSCR8Q96T75 97 aa7.5□□□□□ -1.21
CHD3-210ENST00000479080 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
CHD3-210ENST00000479080 VPS25Q9BRG1 176 aa7.47□□□□□ -1.21
CHD3-210ENST00000479080 A0A087WSZ3 146 aa7.46□□□□□ -1.22
CHD3-210ENST00000479080 J3QL48 77 aa7.46□□□□□ -1.22
CHD3-210ENST00000479080 SPINK1P00995 79 aa7.46□□□□□ -1.22
CHD3-210ENST00000479080 SPAG11AQ6PDA7 123 aa7.46□□□□□ -1.22
CHD3-210ENST00000479080 RPS29P62273 56 aaKnown RBP7.45□□□□□ -1.22
CHD3-210ENST00000479080 PDE6GP18545 87 aa7.44□□□□□ -1.22
CHD3-210ENST00000479080 Q5XG85 94 aa7.44□□□□□ -1.22
CHD3-210ENST00000479080 C4orf48Q5BLP8 95 aa7.42□□□□□ -1.22
CHD3-210ENST00000479080 Q96NJ1 140 aa7.42□□□□□ -1.22
CHD3-210ENST00000479080 RETNLBQ9BQ08 111 aa7.4□□□□□ -1.22
CHD3-210ENST00000479080 ASB16-AS1Q495Z4 193 aa7.39□□□□□ -1.23
CHD3-210ENST00000479080 C1orf195Q5TG92 126 aa7.39□□□□□ -1.23
CHD3-210ENST00000479080 LIMD2Q9BT23 127 aa7.38□□□□□ -1.23
CHD3-210ENST00000479080 LINC00846Q9NV44 126 aa7.38□□□□□ -1.23
CHD3-210ENST00000479080 LINC00472Q9H8W2 130 aa7.37□□□□□ -1.23
CHD3-210ENST00000479080 A0A1B0GW54 56 aa7.36□□□□□ -1.23
CHD3-210ENST00000479080 C21orf62-AS1Q17RA5 79 aa7.36□□□□□ -1.23
CHD3-210ENST00000479080 SS18L2Q9UHA2 77 aa7.34□□□□□ -1.23
CHD3-210ENST00000479080 FAM240AA0A1B0GVK7 77 aa7.33□□□□□ -1.24
CHD3-210ENST00000479080 DEFB116Q30KQ4 102 aa7.33□□□□□ -1.24
CHD3-210ENST00000479080 Q6ZVQ6 151 aa7.33□□□□□ -1.24
CHD3-210ENST00000479080 LPAP08519 4548 aa7.32□□□□□ -1.24
CHD3-210ENST00000479080 NREPQ16612 68 aa7.28□□□□□ -1.24
CHD3-210ENST00000479080 ACYP1P07311 99 aa7.27□□□□□ -1.25
CHD3-210ENST00000479080 DSCR10P59022 87 aa7.27□□□□□ -1.25
CHD3-210ENST00000479080 CDIP1Q9H305 208 aa7.27□□□□□ -1.25
CHD3-210ENST00000479080 IGKV4-1P06312 121 aa7.26□□□□□ -1.25
CHD3-210ENST00000479080 FP248Q71RG6 208 aaPredicted RBP7.26□□□□□ -1.25
CHD3-210ENST00000479080 PRR4Q16378 134 aa7.25□□□□□ -1.25
CHD3-210ENST00000479080 UBL5Q9BZL1 73 aa7.25□□□□□ -1.25
CHD3-210ENST00000479080 LRP2P98164 4655 aa7.24□□□□□ -1.25
CHD3-210ENST00000479080 IGLV7-46A0A075B6I9 117 aa7.24□□□□□ -1.25
CHD3-210ENST00000479080 SIGMAR1Q99720 223 aa7.24□□□□□ -1.25
CHD3-210ENST00000479080 IGKV3D-7A0A0C4DH55 119 aa7.23□□□□□ -1.25
CHD3-210ENST00000479080 KRTAP13-3Q3SY46 172 aa7.23□□□□□ -1.25
CHD3-210ENST00000479080 NOTCH2NLQ7Z3S9 236 aa7.23□□□□□ -1.25
CHD3-210ENST00000479080 J3QR89 54 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms