RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
SMARCE1-209ENST00000478349 KRTAP9-9Q9BYP9 154 aa7.85□□□□□ -1.15
SMARCE1-209ENST00000478349 KRTAP9-4Q9BYQ2 154 aa7.85□□□□□ -1.15
SMARCE1-209ENST00000478349 SMIM29Q86T20 159 aa7.84□□□□□ -1.15
SMARCE1-209ENST00000478349 ATOH7Q8N100 152 aa7.84□□□□□ -1.15
SMARCE1-209ENST00000478349 HSBP1L1C9JCN9 74 aa7.83□□□□□ -1.16
SMARCE1-209ENST00000478349 C1orf195Q5TG92 126 aa7.83□□□□□ -1.16
SMARCE1-209ENST00000478349 PCP2Q8IVA1 136 aa7.83□□□□□ -1.16
SMARCE1-209ENST00000478349 SMIM11BQ8TCY0 68 aa7.82□□□□□ -1.16
SMARCE1-209ENST00000478349 Q6JHZ5 121 aa7.8□□□□□ -1.16
SMARCE1-209ENST00000478349 RPL37P61927 97 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-209ENST00000478349 S100A2P29034 98 aa7.78□□□□□ -1.16
SMARCE1-209ENST00000478349 hADV29S1A0JD25 119 aa7.77□□□□□ -1.17
SMARCE1-209ENST00000478349 LINC00575Q6W349 94 aa7.76□□□□□ -1.17
SMARCE1-209ENST00000478349 Q6ZQY7 126 aa7.76□□□□□ -1.17
SMARCE1-209ENST00000478349 CLEC2BQ92478 149 aa7.76□□□□□ -1.17
SMARCE1-209ENST00000478349 COX6B2Q6YFQ2 88 aa7.75□□□□□ -1.17
SMARCE1-209ENST00000478349 PPDPFLQ8WWR9 84 aa7.75□□□□□ -1.17
SMARCE1-209ENST00000478349 KRTAP4-8A0A0G2JLE6 195 aa7.74□□□□□ -1.17
SMARCE1-209ENST00000478349 A0A0G2JQZ4 141 aa7.74□□□□□ -1.17
SMARCE1-209ENST00000478349 SCGB1D1O95968 90 aa7.74□□□□□ -1.17
SMARCE1-209ENST00000478349 MT1HP80294 61 aa7.74□□□□□ -1.17
SMARCE1-209ENST00000478349 BVES-AS1Q5T3Y7 98 aa7.74□□□□□ -1.17
SMARCE1-209ENST00000478349 KRTAP19-2Q3LHN2 52 aa7.73□□□□□ -1.17
SMARCE1-209ENST00000478349 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1-209ENST00000478349 M0R2T5 61 aa7.72□□□□□ -1.17
SMARCE1-209ENST00000478349 SNCGO76070 127 aa7.72□□□□□ -1.17
SMARCE1-209ENST00000478349 TRBV7-7A0A0K0K1E9 115 aa7.71□□□□□ -1.18
SMARCE1-209ENST00000478349 S100A6P06703 90 aa7.7□□□□□ -1.18
SMARCE1-209ENST00000478349 OCIAD2Q56VL3 154 aa7.7□□□□□ -1.18
SMARCE1-209ENST00000478349 HIST3H2BBQ8N257 126 aa7.7□□□□□ -1.18
SMARCE1-209ENST00000478349 HIST1H2BLQ99880 126 aa7.7□□□□□ -1.18
SMARCE1-209ENST00000478349 SNHG12Q9BXW3 62 aa7.7□□□□□ -1.18
SMARCE1-209ENST00000478349 HIST1H4GQ99525 98 aa7.69□□□□□ -1.18
SMARCE1-209ENST00000478349 IGFL1Q6UW32 110 aa7.68□□□□□ -1.18
SMARCE1-209ENST00000478349 ATP11AUNQ6ZP68 121 aa7.68□□□□□ -1.18
SMARCE1-209ENST00000478349 CRCT1Q9UGL9 99 aa7.68□□□□□ -1.18
SMARCE1-209ENST00000478349 SS18L2Q9UHA2 77 aa7.68□□□□□ -1.18
SMARCE1-209ENST00000478349 C12orf57Q99622 126 aa7.67□□□□□ -1.18
SMARCE1-209ENST00000478349 LST1O00453 97 aa7.66□□□□□ -1.18
SMARCE1-209ENST00000478349 Q75L30 129 aa7.64□□□□□ -1.19
SMARCE1-209ENST00000478349 OBSCN-AS1Q96MR7 158 aa7.64□□□□□ -1.19
SMARCE1-209ENST00000478349 KRTAP10-6P60371 365 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-209ENST00000478349 RAB37Q96AX2 223 aa7.62□□□□□ -1.19
SMARCE1-209ENST00000478349 H0YGX0 51 aa7.61□□□□□ -1.19
SMARCE1-209ENST00000478349 COX8AP10176 69 aa7.61□□□□□ -1.19
SMARCE1-209ENST00000478349 FSIP2Q5CZC0 6907 aa7.6□□□□□ -1.19
SMARCE1-209ENST00000478349 DLEU1O43261 78 aa7.6□□□□□ -1.19
SMARCE1-209ENST00000478349 Q6Q795 121 aa7.6□□□□□ -1.19
SMARCE1-209ENST00000478349 H3BUT2 72 aa7.59□□□□□ -1.19
SMARCE1-209ENST00000478349 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
SMARCE1-209ENST00000478349 S100A1P23297 94 aa7.58□□□□□ -1.2
SMARCE1-209ENST00000478349 TEN1Q86WV5 123 aa7.58□□□□□ -1.2
SMARCE1-209ENST00000478349 Q96NJ1 140 aa7.57□□□□□ -1.2
SMARCE1-209ENST00000478349 A0A0B4J2C4 111 aa7.56□□□□□ -1.2
SMARCE1-209ENST00000478349 A0A1B0GX51 115 aa7.55□□□□□ -1.2
SMARCE1-209ENST00000478349 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
SMARCE1-209ENST00000478349 CFC1P0CG37 223 aa7.54□□□□□ -1.2
SMARCE1-209ENST00000478349 HIGD1BQ9P298 99 aa7.54□□□□□ -1.2
SMARCE1-209ENST00000478349 TRBV20-1A0A075B6N2 111 aa7.53□□□□□ -1.2
SMARCE1-209ENST00000478349 LCE1DQ5T752 114 aa7.53□□□□□ -1.2
SMARCE1-209ENST00000478349 A0A087WSZ3 146 aa7.52□□□□□ -1.21
SMARCE1-209ENST00000478349 H3BMG7 143 aa7.51□□□□□ -1.21
SMARCE1-209ENST00000478349 FABP2P12104 132 aa7.51□□□□□ -1.21
SMARCE1-209ENST00000478349 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
SMARCE1-209ENST00000478349 C14orf144Q96I85 54 aa7.5□□□□□ -1.21
SMARCE1-209ENST00000478349 VAMP8Q9BV40 100 aa7.5□□□□□ -1.21
SMARCE1-209ENST00000478349 H3BQ85 93 aa7.49□□□□□ -1.21
SMARCE1-209ENST00000478349 SPATA45Q537H7 98 aa7.49□□□□□ -1.21
SMARCE1-209ENST00000478349 PRO1854Q9UHT4 67 aa7.49□□□□□ -1.21
SMARCE1-209ENST00000478349 PAM16Q9Y3D7 125 aa7.49□□□□□ -1.21
SMARCE1-209ENST00000478349 A8MUU9 505 aa7.48□□□□□ -1.21
SMARCE1-209ENST00000478349 DNAL4O96015 105 aa7.48□□□□□ -1.21
SMARCE1-209ENST00000478349 SIGMAR1Q99720 223 aa7.48□□□□□ -1.21
SMARCE1-209ENST00000478349 FAM218AQ96MZ4 157 aa7.47□□□□□ -1.21
SMARCE1-209ENST00000478349 CEND1Q8N111 149 aa7.46□□□□□ -1.22
SMARCE1-209ENST00000478349 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.22
SMARCE1-209ENST00000478349 C2orf91Q6ZV80 131 aa7.43□□□□□ -1.22
SMARCE1-209ENST00000478349 ORMDL1Q9P0S3 153 aa7.43□□□□□ -1.22
SMARCE1-209ENST00000478349 TRBV7-4A0A0J9YYF1 115 aa7.42□□□□□ -1.22
SMARCE1-209ENST00000478349 ANKRD29Q8N6D5 301 aa7.42□□□□□ -1.22
SMARCE1-209ENST00000478349 TRIAP1O43715 76 aa7.41□□□□□ -1.22
SMARCE1-209ENST00000478349 COX6CP09669 75 aa7.41□□□□□ -1.22
SMARCE1-209ENST00000478349 DSCR10P59022 87 aa7.41□□□□□ -1.22
SMARCE1-209ENST00000478349 LINC00313P59037 77 aa7.41□□□□□ -1.22
SMARCE1-209ENST00000478349 TMEM256-PLSCR3K7ERE1 68 aa7.4□□□□□ -1.22
SMARCE1-209ENST00000478349 IGKV4-1P06312 121 aa7.4□□□□□ -1.22
SMARCE1-209ENST00000478349 PSMB2P49721 201 aa7.4□□□□□ -1.22
SMARCE1-209ENST00000478349 FLGP20930 4061 aaPredicted RBP7.4□□□□□ -1.23
SMARCE1-209ENST00000478349 FAM236DA0A1B0GTK5 79 aa7.39□□□□□ -1.23
SMARCE1-209ENST00000478349 A0A1W2PNM2 257 aa7.39□□□□□ -1.23
SMARCE1-209ENST00000478349 FAM236CP0DP71 79 aa7.39□□□□□ -1.23
SMARCE1-209ENST00000478349 FXYD2P54710 66 aa7.38□□□□□ -1.23
SMARCE1-209ENST00000478349 TRACP01848 142 aa7.37□□□□□ -1.23
SMARCE1-209ENST00000478349 RBM12B-AS1Q9P1G2 102 aa7.37□□□□□ -1.23
SMARCE1-209ENST00000478349 HSD52Q0P140 79 aa7.36□□□□□ -1.23
SMARCE1-209ENST00000478349 CCKP06307 115 aa7.35□□□□□ -1.23
SMARCE1-209ENST00000478349 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
SMARCE1-209ENST00000478349 A0A1B0GV72 72 aa7.33□□□□□ -1.24
SMARCE1-209ENST00000478349 UBE2V1Q13404 147 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms