RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PCNX1Q96RV3 2341 aa2.01□□□□□ -2.09
FNDC3B-209ENST00000478016 NBDYA0A0U1RRE5 68 aa2.01□□□□□ -2.09
FNDC3B-209ENST00000478016 KRTAP1-4P0C5Y4 121 aa2.01□□□□□ -2.09
FNDC3B-209ENST00000478016 KRTAP5-9P26371 169 aa2.01□□□□□ -2.09
FNDC3B-209ENST00000478016 Q6ZTI0 123 aa2.01□□□□□ -2.09
FNDC3B-209ENST00000478016 SMR3AQ99954 134 aa2.01□□□□□ -2.09
FNDC3B-209ENST00000478016 CNFNQ9BYD5 112 aa2.01□□□□□ -2.09
FNDC3B-209ENST00000478016 MED13LQ71F56 2210 aa2.01□□□□□ -2.09
FNDC3B-209ENST00000478016 ACANP16112 2415 aa2□□□□□ -2.09
FNDC3B-209ENST00000478016 AKAP6Q13023 2319 aa2□□□□□ -2.09
FNDC3B-209ENST00000478016 IGKV2-40A0A087WW87 121 aaPredicted RBP2□□□□□ -2.09
FNDC3B-209ENST00000478016 A0A1W2PNN7 141 aa2□□□□□ -2.09
FNDC3B-209ENST00000478016 NDUFA4O00483 81 aa2□□□□□ -2.09
FNDC3B-209ENST00000478016 NDUFA3O95167 84 aa2□□□□□ -2.09
FNDC3B-209ENST00000478016 IGKV2D-40P01614 121 aaPredicted RBP2□□□□□ -2.09
FNDC3B-209ENST00000478016 GAFA1Q96PS6 74 aa2□□□□□ -2.09
FNDC3B-209ENST00000478016 ABCA2Q9BZC7 2435 aa2□□□□□ -2.09
FNDC3B-209ENST00000478016 CUBNO60494 3623 aa2□□□□□ -2.09
FNDC3B-209ENST00000478016 FN1P02751 2386 aaKnown RBP1.99□□□□□ -2.09
FNDC3B-209ENST00000478016 MAP1AP78559 2803 aaPredicted RBP1.99□□□□□ -2.09
FNDC3B-209ENST00000478016 IGLV4-69A0A075B6H9 119 aa1.99□□□□□ -2.09
FNDC3B-209ENST00000478016 TRBV6-4A0A1B0GX49 114 aa1.99□□□□□ -2.09
FNDC3B-209ENST00000478016 COX17Q14061 63 aa1.99□□□□□ -2.09
FNDC3B-209ENST00000478016 COA5Q86WW8 74 aa1.99□□□□□ -2.09
FNDC3B-209ENST00000478016 R4GN34 69 aa1.99□□□□□ -2.09
FNDC3B-209ENST00000478016 ABCA4P78363 2273 aa1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 NIPBLQ6KC79 2804 aaeCLIP1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 ETDCA0A1B0GVM5 59 aa1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 CPSF4LA6NMK7 179 aaKnown RBP1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 IGKV4-1P06312 121 aa1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 RNASE3P12724 160 aaKnown RBP1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 KRTAP21-3Q3LHN1 58 aa1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 CCL19Q99731 98 aa1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 TIMM8BQ9Y5J9 83 aaPredicted RBP1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 TLN2Q9Y4G6 2542 aa1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 ZANQ9Y493 2812 aa1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 STAB1Q9NY15 2570 aa1.98□□□□□ -2.09
FNDC3B-209ENST00000478016 JMJD1CQ15652 2540 aa1.97□□□□□ -2.09
FNDC3B-209ENST00000478016 TRGV2A0A075B6R0 118 aa1.97□□□□□ -2.09
FNDC3B-209ENST00000478016 DEFB108AA8MXU0 73 aa1.97□□□□□ -2.09
FNDC3B-209ENST00000478016 DEFB112Q30KQ8 113 aa1.97□□□□□ -2.09
FNDC3B-209ENST00000478016 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
FNDC3B-209ENST00000478016 Q96NJ1 140 aa1.97□□□□□ -2.09
FNDC3B-209ENST00000478016 FREM1Q5H8C1 2179 aa1.97□□□□□ -2.09
FNDC3B-209ENST00000478016 NUP214P35658 2090 aaPredicted RBP1.97□□□□□ -2.09
FNDC3B-209ENST00000478016 SVEP1Q4LDE5 3571 aa1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 IGLV4-60A0A075B6I1 120 aa1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 A0A0G2JQZ4 141 aa1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 TPRXLQ17RH7 258 aa1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 LINC01590Q5TEZ4 76 aa1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 C5orf56Q8N8D9 126 aa1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 MXRA5Q9NR99 2828 aa1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 ATRQ13535 2644 aa1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 SONP18583 2426 aaKnown RBP1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 FBN1P35555 2871 aaKnown RBP1.96□□□□□ -2.1
FNDC3B-209ENST00000478016 HIVEP2P31629 2446 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 TRGV1A0A0A0MS02 117 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 NCR3O14931 201 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 MRPL33O75394 65 aaKnown RBP1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 COX7BP24311 80 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 HAMPP81172 84 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 LY6EQ16553 131 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 ARHGAP5-AS1Q96IT6 56 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 SMIM2Q9BVW6 85 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 CSPG4Q6UVK1 2322 aa1.95□□□□□ -2.1
FNDC3B-209ENST00000478016 COL6A5A8TX70 2615 aa1.94□□□□□ -2.1
FNDC3B-209ENST00000478016 TNCP24821 2201 aa1.94□□□□□ -2.1
FNDC3B-209ENST00000478016 IGKV2-29A2NJV5 120 aaPredicted RBP1.94□□□□□ -2.1
FNDC3B-209ENST00000478016 SPACA4Q8TDM5 124 aa1.94□□□□□ -2.1
FNDC3B-209ENST00000478016 NBEAL1Q6ZS30 2694 aa1.94□□□□□ -2.1
FNDC3B-209ENST00000478016 USF3Q68DE3 2245 aa1.93□□□□□ -2.1
FNDC3B-209ENST00000478016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.93□□□□□ -2.1
FNDC3B-209ENST00000478016 DEFB131BA0A096LNP1 70 aa1.93□□□□□ -2.1
FNDC3B-209ENST00000478016 KRTAP12-2P59991 146 aa1.93□□□□□ -2.1
FNDC3B-209ENST00000478016 RPL37AP61513 92 aaKnown RBP1.93□□□□□ -2.1
FNDC3B-209ENST00000478016 LINC00308Q8TCZ7 52 aa1.93□□□□□ -2.1
FNDC3B-209ENST00000478016 ANAPC11Q9NYG5 84 aa1.93□□□□□ -2.1
FNDC3B-209ENST00000478016 ROS1P08922 2347 aa1.92□□□□□ -2.1
FNDC3B-209ENST00000478016 PRKDCP78527 4128 aaKnown RBP1.92□□□□□ -2.1
FNDC3B-209ENST00000478016 IGLV6-57P01721 117 aa1.92□□□□□ -2.1
FNDC3B-209ENST00000478016 IAPPP10997 89 aa1.92□□□□□ -2.1
FNDC3B-209ENST00000478016 MEGF8Q7Z7M0 2845 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 PRR14LQ5THK1 2151 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 A0A096LNT2 108 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 A0A1B0GU69 56 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 M0R2N4 97 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 INE1O15225 51 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 NDUFA1O15239 70 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 HRES1P13985 223 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 LINC00315P59091 139 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 C10orf55Q5SWW7 151 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 CMYA5Q8N3K9 4069 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 ABCA1O95477 2261 aa1.91□□□□□ -2.1
FNDC3B-209ENST00000478016 PLCE1Q9P212 2302 aa1.9□□□□□ -2.1
FNDC3B-209ENST00000478016 KRTAP11-1Q8IUC1 163 aa1.9□□□□□ -2.11
FNDC3B-209ENST00000478016 LINC00304Q8N9R0 145 aa1.9□□□□□ -2.11
FNDC3B-209ENST00000478016 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms