RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GHRHP01286 108 aa9.58□□□□□ -0.88
VHL-203ENST00000477538 KRTAP13-2Q52LG2 175 aa9.58□□□□□ -0.88
VHL-203ENST00000477538 LAMTOR3Q9UHA4 124 aa9.58□□□□□ -0.88
VHL-203ENST00000477538 IGLV9-49A0A0B4J1Y8 123 aa9.57□□□□□ -0.88
VHL-203ENST00000477538 SMIM29Q86T20 159 aa9.57□□□□□ -0.88
VHL-203ENST00000477538 C3orf22Q8N5N4 141 aa9.57□□□□□ -0.88
VHL-203ENST00000477538 KRTAP29-1A8MX34 341 aaPredicted RBP9.56□□□□□ -0.88
VHL-203ENST00000477538 H3BQ85 93 aa9.55□□□□□ -0.88
VHL-203ENST00000477538 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
VHL-203ENST00000477538 LRP1Q07954 4544 aaKnown RBP9.54□□□□□ -0.88
VHL-203ENST00000477538 MOBPQ13875 183 aa9.54□□□□□ -0.88
VHL-203ENST00000477538 C9orf153Q5TBE3 101 aa9.54□□□□□ -0.88
VHL-203ENST00000477538 TYMSOSQ8TAI1 123 aa9.54□□□□□ -0.88
VHL-203ENST00000477538 FAT3Q8TDW7 4589 aa9.53□□□□□ -0.88
VHL-203ENST00000477538 C9JAW5 83 aa9.53□□□□□ -0.88
VHL-203ENST00000477538 H3BMG7 143 aa9.53□□□□□ -0.88
VHL-203ENST00000477538 K7EP34 96 aa9.53□□□□□ -0.88
VHL-203ENST00000477538 TMEM256-PLSCR3K7ERE1 68 aa9.53□□□□□ -0.88
VHL-203ENST00000477538 F8WEM9 126 aa9.52□□□□□ -0.89
VHL-203ENST00000477538 BAALC-AS2P0C853 105 aa9.52□□□□□ -0.89
VHL-203ENST00000477538 KRTAP10-8P60410 259 aa9.52□□□□□ -0.89
VHL-203ENST00000477538 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
VHL-203ENST00000477538 MT1HL1P0DM35 61 aa9.51□□□□□ -0.89
VHL-203ENST00000477538 Q8NBF4 154 aa9.51□□□□□ -0.89
VHL-203ENST00000477538 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
VHL-203ENST00000477538 GTF2H5Q6ZYL4 71 aa9.49□□□□□ -0.89
VHL-203ENST00000477538 UBE2V1Q13404 147 aa9.48□□□□□ -0.89
VHL-203ENST00000477538 SSBP3-AS1Q7Z2R9 100 aa9.48□□□□□ -0.89
VHL-203ENST00000477538 MTURNQ8N3F0 131 aa9.48□□□□□ -0.89
VHL-203ENST00000477538 J3QL48 77 aa9.47□□□□□ -0.89
VHL-203ENST00000477538 H3BT86 120 aa9.46□□□□□ -0.9
VHL-203ENST00000477538 ANKRD29Q8N6D5 301 aa9.46□□□□□ -0.9
VHL-203ENST00000477538 PCLOQ9Y6V0 5065 aa9.46□□□□□ -0.9
VHL-203ENST00000477538 IGLV8-61A0A075B6I0 122 aa9.45□□□□□ -0.9
VHL-203ENST00000477538 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
VHL-203ENST00000477538 A0A1B0GV72 72 aa9.43□□□□□ -0.9
VHL-203ENST00000477538 Q6JHZ5 121 aa9.43□□□□□ -0.9
VHL-203ENST00000477538 LINC00304Q8N9R0 145 aa9.43□□□□□ -0.9
VHL-203ENST00000477538 A0A1B0GV90 55 aa9.42□□□□□ -0.9
VHL-203ENST00000477538 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
VHL-203ENST00000477538 TNXBP22105 4242 aa9.41□□□□□ -0.9
VHL-203ENST00000477538 IGFL1Q6UW32 110 aa9.4□□□□□ -0.9
VHL-203ENST00000477538 PRO0461Q9UI25 63 aa9.4□□□□□ -0.9
VHL-203ENST00000477538 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
VHL-203ENST00000477538 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
VHL-203ENST00000477538 RBM3P98179 157 aaKnown RBP9.38□□□□□ -0.91
VHL-203ENST00000477538 SPAG11AQ6PDA7 123 aa9.38□□□□□ -0.91
VHL-203ENST00000477538 JMJD7-PLA2G4BH0Y9G9 81 aa9.37□□□□□ -0.91
VHL-203ENST00000477538 HRCT1Q6UXD1 115 aa9.37□□□□□ -0.91
VHL-203ENST00000477538 F8W1H4 67 aa9.35□□□□□ -0.91
VHL-203ENST00000477538 CD164Q04900 197 aa9.35□□□□□ -0.91
VHL-203ENST00000477538 DSCR8Q96T75 97 aa9.35□□□□□ -0.91
VHL-203ENST00000477538 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
VHL-203ENST00000477538 SPINK1P00995 79 aa9.34□□□□□ -0.91
VHL-203ENST00000477538 OBSCN-AS1Q96MR7 158 aa9.34□□□□□ -0.91
VHL-203ENST00000477538 C14orf132Q9NPU4 83 aa9.31□□□□□ -0.92
VHL-203ENST00000477538 A0A1W2PNM2 257 aa9.3□□□□□ -0.92
VHL-203ENST00000477538 RPS29P62273 56 aaKnown RBP9.3□□□□□ -0.92
VHL-203ENST00000477538 Q6Q795 121 aa9.3□□□□□ -0.92
VHL-203ENST00000477538 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
VHL-203ENST00000477538 CCKP06307 115 aa9.29□□□□□ -0.92
VHL-203ENST00000477538 LOC110117498A0A087WWA1 95 aa9.28□□□□□ -0.92
VHL-203ENST00000477538 TRBV7-7A0A0K0K1E9 115 aa9.28□□□□□ -0.92
VHL-203ENST00000477538 PDE6GP18545 87 aa9.27□□□□□ -0.93
VHL-203ENST00000477538 Q6ZQT0 140 aa9.27□□□□□ -0.93
VHL-203ENST00000477538 VPS25Q9BRG1 176 aa9.27□□□□□ -0.93
VHL-203ENST00000477538 LIMD2Q9BT23 127 aa9.27□□□□□ -0.93
VHL-203ENST00000477538 ETDBQ3ZM63 59 aa9.25□□□□□ -0.93
VHL-203ENST00000477538 Q5XG85 94 aa9.23□□□□□ -0.93
VHL-203ENST00000477538 A0A087WSZ3 146 aa9.22□□□□□ -0.93
VHL-203ENST00000477538 C21orf62-AS1Q17RA5 79 aa9.22□□□□□ -0.93
VHL-203ENST00000477538 RETNLBQ9BQ08 111 aa9.2□□□□□ -0.94
VHL-203ENST00000477538 SS18L2Q9UHA2 77 aa9.2□□□□□ -0.94
VHL-203ENST00000477538 ASB16-AS1Q495Z4 193 aa9.17□□□□□ -0.94
VHL-203ENST00000477538 A0A1B0GW54 56 aa9.16□□□□□ -0.94
VHL-203ENST00000477538 C1orf195Q5TG92 126 aa9.14□□□□□ -0.95
VHL-203ENST00000477538 PRR4Q16378 134 aa9.12□□□□□ -0.95
VHL-203ENST00000477538 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
VHL-203ENST00000477538 Q96NJ1 140 aa9.09□□□□□ -0.95
VHL-203ENST00000477538 HERC1Q15751 4861 aa9.06□□□□□ -0.96
VHL-203ENST00000477538 IGLV7-46A0A075B6I9 117 aa9.06□□□□□ -0.96
VHL-203ENST00000477538 LINC00472Q9H8W2 130 aa9.06□□□□□ -0.96
VHL-203ENST00000477538 NREPQ16612 68 aa9.05□□□□□ -0.96
VHL-203ENST00000477538 IGKV4-1P06312 121 aa9.03□□□□□ -0.96
VHL-203ENST00000477538 DEFB116Q30KQ4 102 aa9.03□□□□□ -0.96
VHL-203ENST00000477538 LINC00846Q9NV44 126 aa9.03□□□□□ -0.96
VHL-203ENST00000477538 SIGMAR1Q99720 223 aa9.02□□□□□ -0.97
VHL-203ENST00000477538 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
VHL-203ENST00000477538 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
VHL-203ENST00000477538 Q6ZVQ6 151 aa9.01□□□□□ -0.97
VHL-203ENST00000477538 FAM240AA0A1B0GVK7 77 aa9□□□□□ -0.97
VHL-203ENST00000477538 UBL5Q9BZL1 73 aa9□□□□□ -0.97
VHL-203ENST00000477538 J3KT08 172 aa8.99□□□□□ -0.97
VHL-203ENST00000477538 ACYP1P07311 99 aa8.99□□□□□ -0.97
VHL-203ENST00000477538 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
VHL-203ENST00000477538 J3QR89 54 aa8.96□□□□□ -0.98
VHL-203ENST00000477538 KRTAP13-3Q3SY46 172 aa8.96□□□□□ -0.98
VHL-203ENST00000477538 BPY2O14599 106 aa8.94□□□□□ -0.98
VHL-203ENST00000477538 C9orf92A6NGG3 77 aa8.93□□□□□ -0.98
VHL-203ENST00000477538 A8MWP4 228 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms