RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 PANO1I0J062 215 aa6.89□□□□□ -1.31
HLA-DMB-260ENST00000477537 CRYGAP11844 174 aa6.89□□□□□ -1.31
HLA-DMB-260ENST00000477537 DPH3Q96FX2 82 aa6.88□□□□□ -1.31
HLA-DMB-260ENST00000477537 A0A1B0GW54 56 aa6.88□□□□□ -1.31
HLA-DMB-260ENST00000477537 EPM2AB3EWF7 344 aa6.88□□□□□ -1.31
HLA-DMB-260ENST00000477537 LINC00476Q8WZB0 136 aa6.88□□□□□ -1.31
HLA-DMB-260ENST00000477537 A0A087WTM6 91 aa6.87□□□□□ -1.31
HLA-DMB-260ENST00000477537 BPY2O14599 106 aa6.87□□□□□ -1.31
HLA-DMB-260ENST00000477537 Q8N9L7 120 aa6.87□□□□□ -1.31
HLA-DMB-260ENST00000477537 BCE1O60756 84 aa6.86□□□□□ -1.31
HLA-DMB-260ENST00000477537 SPRR4Q96PI1 79 aa6.86□□□□□ -1.31
HLA-DMB-260ENST00000477537 H0Y9J4 135 aa6.86□□□□□ -1.31
HLA-DMB-260ENST00000477537 UBE2AP49459 152 aa6.86□□□□□ -1.31
HLA-DMB-260ENST00000477537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
HLA-DMB-260ENST00000477537 IGKV4-1P06312 121 aa6.85□□□□□ -1.31
HLA-DMB-260ENST00000477537 Q6ZR54 194 aa6.85□□□□□ -1.31
HLA-DMB-260ENST00000477537 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.31
HLA-DMB-260ENST00000477537 A0A0G2JQZ4 141 aa6.84□□□□□ -1.31
HLA-DMB-260ENST00000477537 IGFL1Q6UW32 110 aa6.84□□□□□ -1.31
HLA-DMB-260ENST00000477537 SPACA4Q8TDM5 124 aa6.84□□□□□ -1.31
HLA-DMB-260ENST00000477537 CYSTM1Q9H1C7 97 aa6.84□□□□□ -1.31
HLA-DMB-260ENST00000477537 TRAV7A0A075B6U4 112 aa6.84□□□□□ -1.32
HLA-DMB-260ENST00000477537 IGLV8-61A0A075B6I0 122 aa6.83□□□□□ -1.32
HLA-DMB-260ENST00000477537 RTL8CO15255 209 aa6.82□□□□□ -1.32
HLA-DMB-260ENST00000477537 FRAS1Q86XX4 4008 aa6.82□□□□□ -1.32
HLA-DMB-260ENST00000477537 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
HLA-DMB-260ENST00000477537 LY6G6CO95867 125 aa6.81□□□□□ -1.32
HLA-DMB-260ENST00000477537 SPRR1BP22528 89 aa6.81□□□□□ -1.32
HLA-DMB-260ENST00000477537 HECTD4Q9Y4D8 3996 aa6.8□□□□□ -1.32
HLA-DMB-260ENST00000477537 C1orf134Q5TEV5 83 aa6.8□□□□□ -1.32
HLA-DMB-260ENST00000477537 KRTAP13-1Q8IUC0 172 aa6.8□□□□□ -1.32
HLA-DMB-260ENST00000477537 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
HLA-DMB-260ENST00000477537 RYR2Q92736 4967 aa6.78□□□□□ -1.32
HLA-DMB-260ENST00000477537 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
HLA-DMB-260ENST00000477537 RYR3Q15413 4870 aa6.77□□□□□ -1.33
HLA-DMB-260ENST00000477537 IGLV5-52A0A0A0MRZ9 124 aa6.77□□□□□ -1.33
HLA-DMB-260ENST00000477537 SRRM2Q9UQ35 2752 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-260ENST00000477537 A0A087WSZ3 146 aa6.76□□□□□ -1.33
HLA-DMB-260ENST00000477537 DSCR10P59022 87 aa6.76□□□□□ -1.33
HLA-DMB-260ENST00000477537 TMEM258P61165 79 aa6.76□□□□□ -1.33
HLA-DMB-260ENST00000477537 FAT2Q9NYQ8 4349 aa6.75□□□□□ -1.33
HLA-DMB-260ENST00000477537 C5orf47Q569G3 176 aa6.75□□□□□ -1.33
HLA-DMB-260ENST00000477537 J3KT08 172 aa6.74□□□□□ -1.33
HLA-DMB-260ENST00000477537 RPS28P62857 69 aaKnown RBP6.74□□□□□ -1.33
HLA-DMB-260ENST00000477537 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
HLA-DMB-260ENST00000477537 K7EQZ3 153 aa6.74□□□□□ -1.33
HLA-DMB-260ENST00000477537 DEFB116Q30KQ4 102 aa6.74□□□□□ -1.33
HLA-DMB-260ENST00000477537 PSORS1C2Q9UIG4 136 aa6.73□□□□□ -1.33
HLA-DMB-260ENST00000477537 SNURFQ9Y675 71 aa6.73□□□□□ -1.33
HLA-DMB-260ENST00000477537 OCR1Q9BZK8 76 aa6.72□□□□□ -1.33
HLA-DMB-260ENST00000477537 KLKP1Q107X0 134 aa6.72□□□□□ -1.33
HLA-DMB-260ENST00000477537 DNAH11Q96DT5 4516 aa6.7□□□□□ -1.34
HLA-DMB-260ENST00000477537 IGLV9-49A0A0B4J1Y8 123 aa6.7□□□□□ -1.34
HLA-DMB-260ENST00000477537 J3QL48 77 aa6.7□□□□□ -1.34
HLA-DMB-260ENST00000477537 LCE6AA0A183 80 aa6.69□□□□□ -1.34
HLA-DMB-260ENST00000477537 LINC00483Q53H64 154 aa6.69□□□□□ -1.34
HLA-DMB-260ENST00000477537 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
HLA-DMB-260ENST00000477537 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-260ENST00000477537 H7BZZ5 65 aa6.68□□□□□ -1.34
HLA-DMB-260ENST00000477537 TMEM254Q8TBM7 123 aa6.68□□□□□ -1.34
HLA-DMB-260ENST00000477537 HCG22E2RYF7 251 aa6.68□□□□□ -1.34
HLA-DMB-260ENST00000477537 ZNF861PO60384 105 aa6.68□□□□□ -1.34
HLA-DMB-260ENST00000477537 RPL37AP61513 92 aaKnown RBP6.68□□□□□ -1.34
HLA-DMB-260ENST00000477537 PKD1P98161 4303 aa6.67□□□□□ -1.34
HLA-DMB-260ENST00000477537 DNAH8Q96JB1 4490 aa6.67□□□□□ -1.34
HLA-DMB-260ENST00000477537 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
HLA-DMB-260ENST00000477537 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
HLA-DMB-260ENST00000477537 FAM236DA0A1B0GTK5 79 aa6.66□□□□□ -1.34
HLA-DMB-260ENST00000477537 FAM236CP0DP71 79 aa6.66□□□□□ -1.34
HLA-DMB-260ENST00000477537 LINC00472Q9H8W2 130 aa6.66□□□□□ -1.34
HLA-DMB-260ENST00000477537 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
HLA-DMB-260ENST00000477537 A0A0U1RQV1 116 aa6.64□□□□□ -1.35
HLA-DMB-260ENST00000477537 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
HLA-DMB-260ENST00000477537 ANAPC11Q9NYG5 84 aa6.64□□□□□ -1.35
HLA-DMB-260ENST00000477537 NDUFC1O43677 76 aa6.64□□□□□ -1.35
HLA-DMB-260ENST00000477537 MOBPQ13875 183 aa6.63□□□□□ -1.35
HLA-DMB-260ENST00000477537 HRCT1Q6UXD1 115 aa6.63□□□□□ -1.35
HLA-DMB-260ENST00000477537 A8MWP4 228 aa6.62□□□□□ -1.35
HLA-DMB-260ENST00000477537 IGLV7-43P04211 117 aa6.62□□□□□ -1.35
HLA-DMB-260ENST00000477537 PRR15Q8IV56 129 aa6.62□□□□□ -1.35
HLA-DMB-260ENST00000477537 CIRBP-AS1Q8TBR5 109 aa6.61□□□□□ -1.35
HLA-DMB-260ENST00000477537 KRTAP29-1A8MX34 341 aaPredicted RBP6.59□□□□□ -1.35
HLA-DMB-260ENST00000477537 OXTP01178 125 aa6.59□□□□□ -1.35
HLA-DMB-260ENST00000477537 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
HLA-DMB-260ENST00000477537 CASC2Q6XLA1 102 aa6.59□□□□□ -1.35
HLA-DMB-260ENST00000477537 Q96NJ1 140 aa6.58□□□□□ -1.36
HLA-DMB-260ENST00000477537 KRTAP10-1P60331 282 aa6.58□□□□□ -1.36
HLA-DMB-260ENST00000477537 NDUFB1O75438 58 aa6.56□□□□□ -1.36
HLA-DMB-260ENST00000477537 SERP1Q9Y6X1 66 aa6.56□□□□□ -1.36
HLA-DMB-260ENST00000477537 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
HLA-DMB-260ENST00000477537 LRP1BQ9NZR2 4599 aa6.55□□□□□ -1.36
HLA-DMB-260ENST00000477537 MMP24-AS1A0A0U1RRL7 71 aa6.54□□□□□ -1.36
HLA-DMB-260ENST00000477537 Q6ZSA8 131 aa6.54□□□□□ -1.36
HLA-DMB-260ENST00000477537 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
HLA-DMB-260ENST00000477537 DYNC1H1Q14204 4646 aaKnown RBP6.53□□□□□ -1.36
HLA-DMB-260ENST00000477537 EPPK1P58107 5090 aaKnown RBP6.53□□□□□ -1.36
HLA-DMB-260ENST00000477537 Q5XG85 94 aa6.52□□□□□ -1.37
HLA-DMB-260ENST00000477537 hDV103S1A0JD37 113 aa6.51□□□□□ -1.37
HLA-DMB-260ENST00000477537 MP68P56378 58 aa6.51□□□□□ -1.37
HLA-DMB-260ENST00000477537 CDK2AP2O75956 126 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms