RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 Q8N1X5 172 aa10.48□□□□□ -0.73
EPHB4-204ENST00000477446 HERC2O95714 4834 aa10.47□□□□□ -0.73
EPHB4-204ENST00000477446 RPL37AP8A6NKH3 93 aa10.46□□□□□ -0.74
EPHB4-204ENST00000477446 FAM229AH3BQW9 127 aa10.45□□□□□ -0.74
EPHB4-204ENST00000477446 TRBV7-4A0A0J9YYF1 115 aa10.44□□□□□ -0.74
EPHB4-204ENST00000477446 ATP5EP2Q5VTU8 51 aa10.44□□□□□ -0.74
EPHB4-204ENST00000477446 KRTAP11-1Q8IUC1 163 aa10.44□□□□□ -0.74
EPHB4-204ENST00000477446 UBL5Q9BZL1 73 aa10.44□□□□□ -0.74
EPHB4-204ENST00000477446 FAT1Q14517 4588 aa10.44□□□□□ -0.74
EPHB4-204ENST00000477446 Q5VSD8 79 aa10.43□□□□□ -0.74
EPHB4-204ENST00000477446 REG3GQ6UW15 175 aa10.43□□□□□ -0.74
EPHB4-204ENST00000477446 ANAPC13Q9BS18 74 aa10.43□□□□□ -0.74
EPHB4-204ENST00000477446 UBE2BP63146 152 aa10.43□□□□□ -0.74
EPHB4-204ENST00000477446 RPL37AP61513 92 aaKnown RBP10.42□□□□□ -0.74
EPHB4-204ENST00000477446 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
EPHB4-204ENST00000477446 PLA2G1BP04054 148 aaKnown RBP10.39□□□□□ -0.75
EPHB4-204ENST00000477446 KRTAP10-4P60372 401 aaPredicted RBP10.39□□□□□ -0.75
EPHB4-204ENST00000477446 VPS13BQ7Z7G8 4022 aa10.39□□□□□ -0.75
EPHB4-204ENST00000477446 Q8N377 158 aa10.39□□□□□ -0.75
EPHB4-204ENST00000477446 Q9BRP9 147 aa10.39□□□□□ -0.75
EPHB4-204ENST00000477446 PCLOQ9Y6V0 5065 aa10.38□□□□□ -0.75
EPHB4-204ENST00000477446 IGLV5-48A0A075B6I7 105 aa10.38□□□□□ -0.75
EPHB4-204ENST00000477446 KRTAP4-5Q9BYR2 181 aa10.38□□□□□ -0.75
EPHB4-204ENST00000477446 LINC01547P58512 204 aaPredicted RBP10.36□□□□□ -0.75
EPHB4-204ENST00000477446 A0A1B0GW54 56 aa10.35□□□□□ -0.75
EPHB4-204ENST00000477446 IGKV3D-7A0A0C4DH55 119 aa10.35□□□□□ -0.75
EPHB4-204ENST00000477446 C1orf137Q5JT78 98 aa10.35□□□□□ -0.75
EPHB4-204ENST00000477446 DEFB105AQ8NG35 78 aa10.35□□□□□ -0.75
EPHB4-204ENST00000477446 SRRM2Q9UQ35 2752 aaKnown RBP10.34□□□□□ -0.75
EPHB4-204ENST00000477446 FAM236AA0A1B0GUQ0 79 aa10.34□□□□□ -0.75
EPHB4-204ENST00000477446 FAM236BA0A1B0GV22 79 aa10.34□□□□□ -0.75
EPHB4-204ENST00000477446 H0Y9J4 135 aa10.32□□□□□ -0.76
EPHB4-204ENST00000477446 HIST1H4AP62805 103 aaKnown RBP10.31□□□□□ -0.76
EPHB4-204ENST00000477446 Q6ZVQ6 151 aa10.31□□□□□ -0.76
EPHB4-204ENST00000477446 FAM19A1Q7Z5A9 133 aa10.31□□□□□ -0.76
EPHB4-204ENST00000477446 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
EPHB4-204ENST00000477446 CXCL6P80162 114 aa10.29□□□□□ -0.76
EPHB4-204ENST00000477446 ATOX1O00244 68 aa10.28□□□□□ -0.76
EPHB4-204ENST00000477446 BCE1O60756 84 aa10.28□□□□□ -0.76
EPHB4-204ENST00000477446 ERC2-IT1O76042 136 aa10.27□□□□□ -0.76
EPHB4-204ENST00000477446 ST20-AS1Q8NBB2 130 aa10.27□□□□□ -0.76
EPHB4-204ENST00000477446 ABCA13Q86UQ4 5058 aa10.26□□□□□ -0.77
EPHB4-204ENST00000477446 F8WEM9 126 aa10.23□□□□□ -0.77
EPHB4-204ENST00000477446 SPINK6Q6UWN8 80 aa10.22□□□□□ -0.77
EPHB4-204ENST00000477446 ZNF861PO60384 105 aa10.22□□□□□ -0.77
EPHB4-204ENST00000477446 UBE2AP49459 152 aa10.22□□□□□ -0.77
EPHB4-204ENST00000477446 PRLHP81277 87 aa10.22□□□□□ -0.77
EPHB4-204ENST00000477446 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
EPHB4-204ENST00000477446 NREPQ16612 68 aa10.21□□□□□ -0.78
EPHB4-204ENST00000477446 SMIM29Q86T20 159 aa10.21□□□□□ -0.78
EPHB4-204ENST00000477446 HIGD2AQ9BW72 106 aa10.21□□□□□ -0.78
EPHB4-204ENST00000477446 SPRR1BP22528 89 aa10.2□□□□□ -0.78
EPHB4-204ENST00000477446 C3orf22Q8N5N4 141 aa10.2□□□□□ -0.78
EPHB4-204ENST00000477446 Q8NBF4 154 aa10.2□□□□□ -0.78
EPHB4-204ENST00000477446 IGLV8-61A0A075B6I0 122 aa10.19□□□□□ -0.78
EPHB4-204ENST00000477446 SPRR4Q96PI1 79 aa10.19□□□□□ -0.78
EPHB4-204ENST00000477446 PKHD1L1Q86WI1 4243 aa10.18□□□□□ -0.78
EPHB4-204ENST00000477446 A0A087WVE0 104 aa10.18□□□□□ -0.78
EPHB4-204ENST00000477446 UQCRQO14949 82 aa10.18□□□□□ -0.78
EPHB4-204ENST00000477446 A0A1W2PNM2 257 aa10.17□□□□□ -0.78
EPHB4-204ENST00000477446 CCDC179H3BU77 68 aa10.17□□□□□ -0.78
EPHB4-204ENST00000477446 COX7CP15954 63 aa10.16□□□□□ -0.78
EPHB4-204ENST00000477446 FLG2Q5D862 2391 aaPredicted RBP10.15□□□□□ -0.78
EPHB4-204ENST00000477446 CRYGAP11844 174 aa10.14□□□□□ -0.79
EPHB4-204ENST00000477446 SERP2Q8N6R1 65 aa10.14□□□□□ -0.79
EPHB4-204ENST00000477446 BPY2O14599 106 aa10.12□□□□□ -0.79
EPHB4-204ENST00000477446 SMIM20Q8N5G0 67 aa10.12□□□□□ -0.79
EPHB4-204ENST00000477446 IGFL1Q6UW32 110 aa10.09□□□□□ -0.79
EPHB4-204ENST00000477446 MYCBP2O75592 4640 aa10.08□□□□□ -0.8
EPHB4-204ENST00000477446 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
EPHB4-204ENST00000477446 C9orf153Q5TBE3 101 aa10.06□□□□□ -0.8
EPHB4-204ENST00000477446 ZNF706Q9Y5V0 76 aaPredicted RBP10.06□□□□□ -0.8
EPHB4-204ENST00000477446 LRP1Q07954 4544 aaKnown RBP10.05□□□□□ -0.8
EPHB4-204ENST00000477446 OXTP01178 125 aa10.04□□□□□ -0.8
EPHB4-204ENST00000477446 TRAV7A0A075B6U4 112 aa10.03□□□□□ -0.8
EPHB4-204ENST00000477446 KRTAP29-1A8MX34 341 aaPredicted RBP10.02□□□□□ -0.81
EPHB4-204ENST00000477446 IGKV4-1P06312 121 aa10.02□□□□□ -0.81
EPHB4-204ENST00000477446 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.81
EPHB4-204ENST00000477446 LINC00483Q53H64 154 aa10.01□□□□□ -0.81
EPHB4-204ENST00000477446 FAT3Q8TDW7 4589 aa10.01□□□□□ -0.81
EPHB4-204ENST00000477446 PRR26Q8N8Z3 221 aa9.98□□□□□ -0.81
EPHB4-204ENST00000477446 A0A087X002 238 aa9.97□□□□□ -0.81
EPHB4-204ENST00000477446 MT1HL1P0DM35 61 aa9.97□□□□□ -0.81
EPHB4-204ENST00000477446 A0A087WSZ3 146 aa9.96□□□□□ -0.82
EPHB4-204ENST00000477446 FAM229BQ4G0N7 80 aa9.96□□□□□ -0.82
EPHB4-204ENST00000477446 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
EPHB4-204ENST00000477446 Q8N9L7 120 aa9.94□□□□□ -0.82
EPHB4-204ENST00000477446 J3QL48 77 aa9.93□□□□□ -0.82
EPHB4-204ENST00000477446 DSCR10P59022 87 aa9.93□□□□□ -0.82
EPHB4-204ENST00000477446 A0A0G2JQZ4 141 aa9.92□□□□□ -0.82
EPHB4-204ENST00000477446 KRTAP13-2Q52LG2 175 aa9.92□□□□□ -0.82
EPHB4-204ENST00000477446 SS18L2Q9UHA2 77 aa9.9□□□□□ -0.82
EPHB4-204ENST00000477446 TNXBP22105 4242 aa9.89□□□□□ -0.83
EPHB4-204ENST00000477446 J3KT08 172 aa9.88□□□□□ -0.83
EPHB4-204ENST00000477446 TYMSOSQ8TAI1 123 aa9.88□□□□□ -0.83
EPHB4-204ENST00000477446 IGLV9-49A0A0B4J1Y8 123 aa9.87□□□□□ -0.83
EPHB4-204ENST00000477446 K7EQZ3 153 aa9.86□□□□□ -0.83
EPHB4-204ENST00000477446 LINC00472Q9H8W2 130 aa9.86□□□□□ -0.83
EPHB4-204ENST00000477446 DMBT1Q9UGM3 2413 aaPredicted RBP9.85□□□□□ -0.83
EPHB4-204ENST00000477446 TMEM258P61165 79 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms