RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
CLSTN1-205ENST00000477264 A8MUN3 132 aa9.8□□□□□ -0.84
CLSTN1-205ENST00000477264 IGLV1-50A0A075B6I6 118 aa9.79□□□□□ -0.84
CLSTN1-205ENST00000477264 Q5VV11 94 aa9.79□□□□□ -0.84
CLSTN1-205ENST00000477264 MRPL55Q7Z7F7 128 aaKnown RBP9.78□□□□□ -0.84
CLSTN1-205ENST00000477264 C11orf45Q8TAV5 145 aa9.78□□□□□ -0.84
CLSTN1-205ENST00000477264 PRR4Q16378 134 aa9.75□□□□□ -0.85
CLSTN1-205ENST00000477264 LINC00208Q96KT6 92 aa9.75□□□□□ -0.85
CLSTN1-205ENST00000477264 TENM3Q9P273 2699 aa9.74□□□□□ -0.85
CLSTN1-205ENST00000477264 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
CLSTN1-205ENST00000477264 LINC00476Q8WZB0 136 aa9.74□□□□□ -0.85
CLSTN1-205ENST00000477264 IGKV2D-24A0A075B6R9 120 aa9.73□□□□□ -0.85
CLSTN1-205ENST00000477264 Q8N9P0 234 aaPredicted RBP9.73□□□□□ -0.85
CLSTN1-205ENST00000477264 DNHD1Q96M86 4753 aa9.71□□□□□ -0.85
CLSTN1-205ENST00000477264 DEFB131BA0A096LNP1 70 aa9.71□□□□□ -0.85
CLSTN1-205ENST00000477264 RPL37AP8A6NKH3 93 aa9.71□□□□□ -0.85
CLSTN1-205ENST00000477264 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.86
CLSTN1-205ENST00000477264 KRTAP29-1A8MX34 341 aaPredicted RBP9.71□□□□□ -0.86
CLSTN1-205ENST00000477264 KTN1-AS1Q86SY8 53 aa9.71□□□□□ -0.86
CLSTN1-205ENST00000477264 WFDC13Q8IUB5 93 aa9.71□□□□□ -0.86
CLSTN1-205ENST00000477264 H0Y9P7 68 aa9.7□□□□□ -0.86
CLSTN1-205ENST00000477264 CHKB-CPT1BH3BT56 60 aa9.7□□□□□ -0.86
CLSTN1-205ENST00000477264 Q75L30 129 aa9.69□□□□□ -0.86
CLSTN1-205ENST00000477264 LINC00588Q9Y4M8 146 aa9.69□□□□□ -0.86
CLSTN1-205ENST00000477264 IGFL1Q6UW32 110 aa9.68□□□□□ -0.86
CLSTN1-205ENST00000477264 ATP11AUNQ6ZP68 121 aa9.67□□□□□ -0.86
CLSTN1-205ENST00000477264 PRR15LQ9BU68 103 aa9.67□□□□□ -0.86
CLSTN1-205ENST00000477264 LOC101927531A0A1B0GV80 90 aa9.66□□□□□ -0.86
CLSTN1-205ENST00000477264 NDUFS5O43920 106 aa9.65□□□□□ -0.86
CLSTN1-205ENST00000477264 REG3GQ6UW15 175 aa9.65□□□□□ -0.86
CLSTN1-205ENST00000477264 CASC2Q6XLA1 102 aa9.65□□□□□ -0.86
CLSTN1-205ENST00000477264 C16orf90A8MZG2 172 aa9.65□□□□□ -0.86
CLSTN1-205ENST00000477264 C9orf163Q8N9P6 203 aa9.65□□□□□ -0.86
CLSTN1-205ENST00000477264 HUWE1Q7Z6Z7 4374 aaKnown RBP9.64□□□□□ -0.87
CLSTN1-205ENST00000477264 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
CLSTN1-205ENST00000477264 A0A087WSZ3 146 aa9.63□□□□□ -0.87
CLSTN1-205ENST00000477264 DNAH10OSP0CZ25 163 aa9.62□□□□□ -0.87
CLSTN1-205ENST00000477264 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
CLSTN1-205ENST00000477264 COL7A1Q02388 2944 aa9.6□□□□□ -0.87
CLSTN1-205ENST00000477264 A8MWP4 228 aa9.6□□□□□ -0.87
CLSTN1-205ENST00000477264 A8MU10 97 aa9.58□□□□□ -0.88
CLSTN1-205ENST00000477264 CNBPP62633 177 aaKnown RBP9.58□□□□□ -0.88
CLSTN1-205ENST00000477264 COA5Q86WW8 74 aa9.58□□□□□ -0.88
CLSTN1-205ENST00000477264 IGLV7-46A0A075B6I9 117 aa9.58□□□□□ -0.88
CLSTN1-205ENST00000477264 DEFB116Q30KQ4 102 aa9.58□□□□□ -0.88
CLSTN1-205ENST00000477264 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
CLSTN1-205ENST00000477264 A6NED7 52 aa9.57□□□□□ -0.88
CLSTN1-205ENST00000477264 CDC42SE1Q9NRR8 79 aa9.57□□□□□ -0.88
CLSTN1-205ENST00000477264 DNAH9Q9NYC9 4486 aa9.57□□□□□ -0.88
CLSTN1-205ENST00000477264 A6NN06 94 aa9.55□□□□□ -0.88
CLSTN1-205ENST00000477264 RPL37AP61513 92 aaKnown RBP9.55□□□□□ -0.88
CLSTN1-205ENST00000477264 LCA10Q71F78 164 aa9.54□□□□□ -0.88
CLSTN1-205ENST00000477264 SPTSSBQ8NFR3 76 aa9.54□□□□□ -0.88
CLSTN1-205ENST00000477264 STAB2Q8WWQ8 2551 aa9.54□□□□□ -0.88
CLSTN1-205ENST00000477264 RBM12B-AS1Q9P1G2 102 aa9.54□□□□□ -0.88
CLSTN1-205ENST00000477264 MEGF8Q7Z7M0 2845 aa9.54□□□□□ -0.88
CLSTN1-205ENST00000477264 LINC00472Q9H8W2 130 aa9.52□□□□□ -0.89
CLSTN1-205ENST00000477264 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.89
CLSTN1-205ENST00000477264 SPRR1BP22528 89 aa9.51□□□□□ -0.89
CLSTN1-205ENST00000477264 A0A0G2JQZ4 141 aa9.51□□□□□ -0.89
CLSTN1-205ENST00000477264 A0A1W2PNN7 141 aa9.51□□□□□ -0.89
CLSTN1-205ENST00000477264 PLAC8Q9NZF1 115 aa9.5□□□□□ -0.89
CLSTN1-205ENST00000477264 FBN3Q75N90 2809 aa9.5□□□□□ -0.89
CLSTN1-205ENST00000477264 TP53AIP1Q9HCN2 124 aa9.5□□□□□ -0.89
CLSTN1-205ENST00000477264 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
CLSTN1-205ENST00000477264 C7orf65Q6ZTY9 151 aa9.48□□□□□ -0.89
CLSTN1-205ENST00000477264 PRKDCP78527 4128 aaKnown RBP9.48□□□□□ -0.89
CLSTN1-205ENST00000477264 NUPR2A6NF83 97 aa9.47□□□□□ -0.89
CLSTN1-205ENST00000477264 PRLHP81277 87 aa9.47□□□□□ -0.89
CLSTN1-205ENST00000477264 H0Y9J4 135 aa9.46□□□□□ -0.9
CLSTN1-205ENST00000477264 MOBPQ13875 183 aa9.45□□□□□ -0.9
CLSTN1-205ENST00000477264 CASC10Q5T4H9 136 aa9.44□□□□□ -0.9
CLSTN1-205ENST00000477264 APLNQ9ULZ1 77 aa9.44□□□□□ -0.9
CLSTN1-205ENST00000477264 UBE2DNLQ8IWF7 75 aa9.43□□□□□ -0.9
CLSTN1-205ENST00000477264 ASB16-AS1Q495Z4 193 aa9.41□□□□□ -0.9
CLSTN1-205ENST00000477264 Q6ZR54 194 aa9.41□□□□□ -0.9
CLSTN1-205ENST00000477264 A0A096LNI7 61 aa9.37□□□□□ -0.91
CLSTN1-205ENST00000477264 CSMD3Q7Z407 3707 aa9.37□□□□□ -0.91
CLSTN1-205ENST00000477264 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
CLSTN1-205ENST00000477264 SPAG11AQ6PDA7 123 aa9.36□□□□□ -0.91
CLSTN1-205ENST00000477264 IGKV2-24A0A0C4DH68 120 aa9.34□□□□□ -0.91
CLSTN1-205ENST00000477264 DYNC2H1Q8NCM8 4307 aaKnown RBP9.33□□□□□ -0.92
CLSTN1-205ENST00000477264 DNAH7Q8WXX0 4024 aa9.33□□□□□ -0.92
CLSTN1-205ENST00000477264 C8orf17Q9NRJ1 99 aa9.33□□□□□ -0.92
CLSTN1-205ENST00000477264 LYSTQ99698 3801 aa9.32□□□□□ -0.92
CLSTN1-205ENST00000477264 HRES1P13985 223 aa9.31□□□□□ -0.92
CLSTN1-205ENST00000477264 TENM2Q9NT68 2774 aa9.29□□□□□ -0.92
CLSTN1-205ENST00000477264 SPINK7P58062 85 aa9.29□□□□□ -0.92
CLSTN1-205ENST00000477264 Q96NJ1 140 aa9.29□□□□□ -0.92
CLSTN1-205ENST00000477264 WWC2-AS2Q96NR7 200 aa9.29□□□□□ -0.92
CLSTN1-205ENST00000477264 KRTAP1-5Q9BYS1 174 aa9.27□□□□□ -0.93
CLSTN1-205ENST00000477264 C14orf177Q52M58 125 aa9.26□□□□□ -0.93
CLSTN1-205ENST00000477264 TGP01266 2768 aa9.26□□□□□ -0.93
CLSTN1-205ENST00000477264 A0A1B0GVX0 72 aa9.26□□□□□ -0.93
CLSTN1-205ENST00000477264 NBDYA0A0U1RRE5 68 aa9.25□□□□□ -0.93
CLSTN1-205ENST00000477264 PLECQ15149 4684 aaKnown RBP9.25□□□□□ -0.93
CLSTN1-205ENST00000477264 MRPL34Q9BQ48 92 aaKnown RBP9.24□□□□□ -0.93
CLSTN1-205ENST00000477264 STARD9Q9P2P6 4700 aa9.24□□□□□ -0.93
CLSTN1-205ENST00000477264 CDK2AP2O75956 126 aa9.22□□□□□ -0.93
CLSTN1-205ENST00000477264 KRTAP11-1Q8IUC1 163 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms