RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.78
VARS2-207ENST00000476162 DNAH7Q8WXX0 4024 aa10.14□□□□□ -0.79
VARS2-207ENST00000476162 REG3GQ6UW15 175 aa10.14□□□□□ -0.79
VARS2-207ENST00000476162 DYNC2H1Q8NCM8 4307 aaKnown RBP10.14□□□□□ -0.79
VARS2-207ENST00000476162 A0A1W2PNN7 141 aa10.14□□□□□ -0.79
VARS2-207ENST00000476162 CD164Q04900 197 aa10.13□□□□□ -0.79
VARS2-207ENST00000476162 IGLV5-48A0A075B6I7 105 aa10.13□□□□□ -0.79
VARS2-207ENST00000476162 LRCOL1A6NCL2 159 aa10.13□□□□□ -0.79
VARS2-207ENST00000476162 UBE2BP63146 152 aa10.13□□□□□ -0.79
VARS2-207ENST00000476162 PLECQ15149 4684 aaKnown RBP10.12□□□□□ -0.79
VARS2-207ENST00000476162 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
VARS2-207ENST00000476162 C14orf177Q52M58 125 aa10.11□□□□□ -0.79
VARS2-207ENST00000476162 C1orf64Q8NEQ6 169 aa10.11□□□□□ -0.79
VARS2-207ENST00000476162 NBDYA0A0U1RRE5 68 aa10.1□□□□□ -0.79
VARS2-207ENST00000476162 CHTF8P0CG12 524 aa10.09□□□□□ -0.79
VARS2-207ENST00000476162 LCE6AA0A183 80 aa10.07□□□□□ -0.8
VARS2-207ENST00000476162 C3orf84H3BNL1 204 aa10.07□□□□□ -0.8
VARS2-207ENST00000476162 TNP2Q05952 138 aa10.07□□□□□ -0.8
VARS2-207ENST00000476162 PSPHP1O15172 72 aa10.07□□□□□ -0.8
VARS2-207ENST00000476162 TRAV22A0A0B4J277 110 aa10.06□□□□□ -0.8
VARS2-207ENST00000476162 PRLHP81277 87 aa10.05□□□□□ -0.8
VARS2-207ENST00000476162 C1orf137Q5JT78 98 aa10.05□□□□□ -0.8
VARS2-207ENST00000476162 C9orf163Q8N9P6 203 aa10.05□□□□□ -0.8
VARS2-207ENST00000476162 Q6ZRN7 208 aaPredicted RBP10.04□□□□□ -0.8
VARS2-207ENST00000476162 A0A1W2PNM2 257 aa10.03□□□□□ -0.8
VARS2-207ENST00000476162 PHF5AQ7RTV0 110 aaKnown RBP10.03□□□□□ -0.8
VARS2-207ENST00000476162 ZCCHC13Q8WW36 166 aaKnown RBP10.03□□□□□ -0.8
VARS2-207ENST00000476162 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
VARS2-207ENST00000476162 KRTAP11-1Q8IUC1 163 aa10.02□□□□□ -0.81
VARS2-207ENST00000476162 SMIM29Q86T20 159 aa10.02□□□□□ -0.81
VARS2-207ENST00000476162 STARD9Q9P2P6 4700 aa10.02□□□□□ -0.81
VARS2-207ENST00000476162 PRKDCP78527 4128 aaKnown RBP10.01□□□□□ -0.81
VARS2-207ENST00000476162 CYP4F30PQ9H0H9 118 aa9.99□□□□□ -0.81
VARS2-207ENST00000476162 Q8NBF4 154 aa9.99□□□□□ -0.81
VARS2-207ENST00000476162 A0A1B0GW54 56 aa9.97□□□□□ -0.81
VARS2-207ENST00000476162 A8MU10 97 aa9.97□□□□□ -0.81
VARS2-207ENST00000476162 PANO1I0J062 215 aa9.97□□□□□ -0.81
VARS2-207ENST00000476162 A8MUN3 132 aa9.97□□□□□ -0.81
VARS2-207ENST00000476162 LINC00476Q8WZB0 136 aa9.96□□□□□ -0.82
VARS2-207ENST00000476162 SPRR4Q96PI1 79 aa9.96□□□□□ -0.82
VARS2-207ENST00000476162 MEGF8Q7Z7M0 2845 aa9.95□□□□□ -0.82
VARS2-207ENST00000476162 A0A0G2JQZ4 141 aa9.94□□□□□ -0.82
VARS2-207ENST00000476162 Q5VV11 94 aa9.93□□□□□ -0.82
VARS2-207ENST00000476162 VPS13DQ5THJ4 4388 aa9.93□□□□□ -0.82
VARS2-207ENST00000476162 DNHD1Q96M86 4753 aa9.92□□□□□ -0.82
VARS2-207ENST00000476162 H0Y9J4 135 aa9.91□□□□□ -0.82
VARS2-207ENST00000476162 IGFL1Q6UW32 110 aa9.91□□□□□ -0.82
VARS2-207ENST00000476162 KTN1-AS1Q86SY8 53 aa9.91□□□□□ -0.82
VARS2-207ENST00000476162 SRRM2Q9UQ35 2752 aaKnown RBP9.9□□□□□ -0.82
VARS2-207ENST00000476162 A0A087WTM6 91 aa9.9□□□□□ -0.82
VARS2-207ENST00000476162 RBM12B-AS1Q9P1G2 102 aa9.9□□□□□ -0.82
VARS2-207ENST00000476162 UBE2AP49459 152 aa9.9□□□□□ -0.83
VARS2-207ENST00000476162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.9□□□□□ -0.83
VARS2-207ENST00000476162 PRR4Q16378 134 aa9.88□□□□□ -0.83
VARS2-207ENST00000476162 IGLV8-61A0A075B6I0 122 aa9.88□□□□□ -0.83
VARS2-207ENST00000476162 SPACA4Q8TDM5 124 aa9.87□□□□□ -0.83
VARS2-207ENST00000476162 Q6ZR54 194 aa9.86□□□□□ -0.83
VARS2-207ENST00000476162 SPRR1BP22528 89 aa9.85□□□□□ -0.83
VARS2-207ENST00000476162 KMT2AQ03164 3969 aa9.85□□□□□ -0.83
VARS2-207ENST00000476162 DSCR10P59022 87 aa9.83□□□□□ -0.84
VARS2-207ENST00000476162 NDUFB1O75438 58 aa9.83□□□□□ -0.84
VARS2-207ENST00000476162 KRTAP13-1Q8IUC0 172 aa9.83□□□□□ -0.84
VARS2-207ENST00000476162 CHKB-CPT1BH3BT56 60 aa9.82□□□□□ -0.84
VARS2-207ENST00000476162 RTL8CO15255 209 aa9.82□□□□□ -0.84
VARS2-207ENST00000476162 A0A087WSZ3 146 aa9.82□□□□□ -0.84
VARS2-207ENST00000476162 Q8N9P0 234 aaPredicted RBP9.82□□□□□ -0.84
VARS2-207ENST00000476162 LIMD2Q9BT23 127 aa9.8□□□□□ -0.84
VARS2-207ENST00000476162 K7EQZ3 153 aa9.8□□□□□ -0.84
VARS2-207ENST00000476162 DNAH2Q9P225 4427 aa9.79□□□□□ -0.84
VARS2-207ENST00000476162 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
VARS2-207ENST00000476162 ATP11AUNQ6ZP68 121 aa9.79□□□□□ -0.84
VARS2-207ENST00000476162 HCG22E2RYF7 251 aa9.78□□□□□ -0.84
VARS2-207ENST00000476162 NDUFS5O43920 106 aa9.78□□□□□ -0.84
VARS2-207ENST00000476162 HECTD4Q9Y4D8 3996 aa9.78□□□□□ -0.84
VARS2-207ENST00000476162 LCA10Q71F78 164 aa9.77□□□□□ -0.85
VARS2-207ENST00000476162 SPTSSBQ8NFR3 76 aa9.76□□□□□ -0.85
VARS2-207ENST00000476162 A6NN06 94 aa9.76□□□□□ -0.85
VARS2-207ENST00000476162 C1orf134Q5TEV5 83 aa9.76□□□□□ -0.85
VARS2-207ENST00000476162 TGP01266 2768 aa9.76□□□□□ -0.85
VARS2-207ENST00000476162 PRR15LQ9BU68 103 aa9.75□□□□□ -0.85
VARS2-207ENST00000476162 LY6G6CO95867 125 aa9.74□□□□□ -0.85
VARS2-207ENST00000476162 IGLV5-52A0A0A0MRZ9 124 aa9.73□□□□□ -0.85
VARS2-207ENST00000476162 FBN3Q75N90 2809 aa9.73□□□□□ -0.85
VARS2-207ENST00000476162 SPANXA2-OT1Q8N9U9 137 aa9.72□□□□□ -0.85
VARS2-207ENST00000476162 LINC00208Q96KT6 92 aa9.72□□□□□ -0.85
VARS2-207ENST00000476162 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
VARS2-207ENST00000476162 Q75L30 129 aa9.72□□□□□ -0.85
VARS2-207ENST00000476162 PLAC8Q9NZF1 115 aa9.72□□□□□ -0.85
VARS2-207ENST00000476162 DNAH17Q9UFH2 4485 aa9.71□□□□□ -0.85
VARS2-207ENST00000476162 MP68P56378 58 aa9.7□□□□□ -0.86
VARS2-207ENST00000476162 IGLV9-49A0A0B4J1Y8 123 aa9.69□□□□□ -0.86
VARS2-207ENST00000476162 LOC101927531A0A1B0GV80 90 aa9.69□□□□□ -0.86
VARS2-207ENST00000476162 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
VARS2-207ENST00000476162 A6NED7 52 aa9.67□□□□□ -0.86
VARS2-207ENST00000476162 LINC00483Q53H64 154 aa9.66□□□□□ -0.86
VARS2-207ENST00000476162 LINC00472Q9H8W2 130 aa9.66□□□□□ -0.86
VARS2-207ENST00000476162 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.86
VARS2-207ENST00000476162 DNAH8Q96JB1 4490 aa9.64□□□□□ -0.87
VARS2-207ENST00000476162 ZNF861PO60384 105 aa9.64□□□□□ -0.87
VARS2-207ENST00000476162 C7orf65Q6ZTY9 151 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms