RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 PKD1P98161 4303 aa12.53□□□□□ -0.4
ITGA4-207ENST00000476089 ZNF706Q9Y5V0 76 aaPredicted RBP12.52□□□□□ -0.41
ITGA4-207ENST00000476089 DNAH5Q8TE73 4624 aa12.51□□□□□ -0.41
ITGA4-207ENST00000476089 IGLV7-43P04211 117 aa12.5□□□□□ -0.41
ITGA4-207ENST00000476089 HAMPP81172 84 aa12.49□□□□□ -0.41
ITGA4-207ENST00000476089 DNAH8Q96JB1 4490 aa12.48□□□□□ -0.41
ITGA4-207ENST00000476089 SPRR4Q96PI1 79 aa12.48□□□□□ -0.41
ITGA4-207ENST00000476089 IGLV8-61A0A075B6I0 122 aa12.47□□□□□ -0.41
ITGA4-207ENST00000476089 SCGB1A1P11684 91 aa12.47□□□□□ -0.41
ITGA4-207ENST00000476089 Q6JHZ5 121 aa12.47□□□□□ -0.41
ITGA4-207ENST00000476089 A0A1B0GW54 56 aa12.46□□□□□ -0.42
ITGA4-207ENST00000476089 TRBV7-7A0A0K0K1E9 115 aa12.45□□□□□ -0.42
ITGA4-207ENST00000476089 Q8NBF4 154 aa12.45□□□□□ -0.42
ITGA4-207ENST00000476089 A0A1B0GVY2 172 aa12.44□□□□□ -0.42
ITGA4-207ENST00000476089 A0A1W2PNM2 257 aa12.44□□□□□ -0.42
ITGA4-207ENST00000476089 Q6Q795 121 aa12.44□□□□□ -0.42
ITGA4-207ENST00000476089 IGFL1Q6UW32 110 aa12.44□□□□□ -0.42
ITGA4-207ENST00000476089 Q6ZVQ6 151 aa12.44□□□□□ -0.42
ITGA4-207ENST00000476089 IMUPQ9GZP8 106 aa12.44□□□□□ -0.42
ITGA4-207ENST00000476089 SRRM2Q9UQ35 2752 aaKnown RBP12.43□□□□□ -0.42
ITGA4-207ENST00000476089 ATP5EP2Q5VTU8 51 aa12.43□□□□□ -0.42
ITGA4-207ENST00000476089 LINC00483Q53H64 154 aa12.42□□□□□ -0.42
ITGA4-207ENST00000476089 IGKV3D-7A0A0C4DH55 119 aa12.41□□□□□ -0.42
ITGA4-207ENST00000476089 NREPQ16612 68 aa12.39□□□□□ -0.43
ITGA4-207ENST00000476089 IGLV9-49A0A0B4J1Y8 123 aa12.37□□□□□ -0.43
ITGA4-207ENST00000476089 CRYGAP11844 174 aa12.37□□□□□ -0.43
ITGA4-207ENST00000476089 A0A0G2JQZ4 141 aa12.36□□□□□ -0.43
ITGA4-207ENST00000476089 C9orf153Q5TBE3 101 aa12.36□□□□□ -0.43
ITGA4-207ENST00000476089 PCP4P48539 62 aa12.35□□□□□ -0.43
ITGA4-207ENST00000476089 RYR2Q92736 4967 aa12.34□□□□□ -0.43
ITGA4-207ENST00000476089 RPL37AP61513 92 aaKnown RBP12.32□□□□□ -0.44
ITGA4-207ENST00000476089 CXCL6P80162 114 aa12.32□□□□□ -0.44
ITGA4-207ENST00000476089 HIST1H4AP62805 103 aaKnown RBP12.31□□□□□ -0.44
ITGA4-207ENST00000476089 ANAPC11Q9NYG5 84 aa12.31□□□□□ -0.44
ITGA4-207ENST00000476089 KMT2CQ8NEZ4 4911 aaKnown RBP12.29□□□□□ -0.44
ITGA4-207ENST00000476089 PKHD1P08F94 4074 aa12.27□□□□□ -0.45
ITGA4-207ENST00000476089 A0A087WSZ3 146 aa12.27□□□□□ -0.45
ITGA4-207ENST00000476089 MOBPQ13875 183 aa12.27□□□□□ -0.45
ITGA4-207ENST00000476089 BPY2O14599 106 aa12.26□□□□□ -0.45
ITGA4-207ENST00000476089 FAM236AA0A1B0GUQ0 79 aa12.24□□□□□ -0.45
ITGA4-207ENST00000476089 FAM236BA0A1B0GV22 79 aa12.24□□□□□ -0.45
ITGA4-207ENST00000476089 LRP1BQ9NZR2 4599 aa12.23□□□□□ -0.45
ITGA4-207ENST00000476089 A0A087WVE0 104 aa12.22□□□□□ -0.45
ITGA4-207ENST00000476089 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
ITGA4-207ENST00000476089 ANAPC13Q9BS18 74 aa12.17□□□□□ -0.46
ITGA4-207ENST00000476089 FAM229BQ4G0N7 80 aa12.16□□□□□ -0.46
ITGA4-207ENST00000476089 HRCT1Q6UXD1 115 aa12.16□□□□□ -0.46
ITGA4-207ENST00000476089 SSBP3-AS1Q7Z2R9 100 aa12.16□□□□□ -0.46
ITGA4-207ENST00000476089 DYNC1H1Q14204 4646 aaKnown RBP12.15□□□□□ -0.46
ITGA4-207ENST00000476089 SPINK6Q6UWN8 80 aa12.15□□□□□ -0.46
ITGA4-207ENST00000476089 Q8N9L7 120 aa12.11□□□□□ -0.47
ITGA4-207ENST00000476089 SS18L2Q9UHA2 77 aa12.11□□□□□ -0.47
ITGA4-207ENST00000476089 A0A087X002 238 aa12.1□□□□□ -0.47
ITGA4-207ENST00000476089 ATOX1O00244 68 aa12.1□□□□□ -0.47
ITGA4-207ENST00000476089 IGKV4-1P06312 121 aa12.09□□□□□ -0.47
ITGA4-207ENST00000476089 KRTAP1-4P0C5Y4 121 aa12.09□□□□□ -0.47
ITGA4-207ENST00000476089 VPS13BQ7Z7G8 4022 aa12.09□□□□□ -0.47
ITGA4-207ENST00000476089 DEFB116Q30KQ4 102 aa12.09□□□□□ -0.47
ITGA4-207ENST00000476089 PLA2G1BP04054 148 aaKnown RBP12.08□□□□□ -0.48
ITGA4-207ENST00000476089 DSCR10P59022 87 aa12.07□□□□□ -0.48
ITGA4-207ENST00000476089 CD164Q04900 197 aa12.07□□□□□ -0.48
ITGA4-207ENST00000476089 KRTAP13-2Q52LG2 175 aa12.06□□□□□ -0.48
ITGA4-207ENST00000476089 LINC00472Q9H8W2 130 aa12.06□□□□□ -0.48
ITGA4-207ENST00000476089 J3KT08 172 aa12.03□□□□□ -0.48
ITGA4-207ENST00000476089 K7EQZ3 153 aa12.02□□□□□ -0.48
ITGA4-207ENST00000476089 APOBP04114 4563 aaKnown RBP12.02□□□□□ -0.49
ITGA4-207ENST00000476089 KRTAP10-4P60372 401 aaPredicted RBP12□□□□□ -0.49
ITGA4-207ENST00000476089 RYR3Q15413 4870 aa11.99□□□□□ -0.49
ITGA4-207ENST00000476089 FAM229AH3BQW9 127 aa11.99□□□□□ -0.49
ITGA4-207ENST00000476089 CDK2AP2O75956 126 aa11.98□□□□□ -0.49
ITGA4-207ENST00000476089 TYMSOSQ8TAI1 123 aa11.98□□□□□ -0.49
ITGA4-207ENST00000476089 A8MWP4 228 aa11.97□□□□□ -0.49
ITGA4-207ENST00000476089 Q96NJ1 140 aa11.96□□□□□ -0.49
ITGA4-207ENST00000476089 NDUFB1O75438 58 aa11.95□□□□□ -0.5
ITGA4-207ENST00000476089 C4orf48Q5BLP8 95 aa11.93□□□□□ -0.5
ITGA4-207ENST00000476089 PRR15Q8IV56 129 aa11.93□□□□□ -0.5
ITGA4-207ENST00000476089 SMIM20Q8N5G0 67 aa11.93□□□□□ -0.5
ITGA4-207ENST00000476089 SERP2Q8N6R1 65 aa11.93□□□□□ -0.5
ITGA4-207ENST00000476089 HCG22E2RYF7 251 aa11.91□□□□□ -0.5
ITGA4-207ENST00000476089 PRR26Q8N8Z3 221 aa11.9□□□□□ -0.5
ITGA4-207ENST00000476089 COX7CP15954 63 aa11.9□□□□□ -0.5
ITGA4-207ENST00000476089 ASB16-AS1Q495Z4 193 aa11.89□□□□□ -0.51
ITGA4-207ENST00000476089 UQCRQO14949 82 aa11.88□□□□□ -0.51
ITGA4-207ENST00000476089 LIMD2Q9BT23 127 aa11.88□□□□□ -0.51
ITGA4-207ENST00000476089 CCDC179H3BU77 68 aa11.87□□□□□ -0.51
ITGA4-207ENST00000476089 Q5XG85 94 aa11.87□□□□□ -0.51
ITGA4-207ENST00000476089 FAT1Q14517 4588 aa11.86□□□□□ -0.51
ITGA4-207ENST00000476089 TRAV7A0A075B6U4 112 aa11.86□□□□□ -0.51
ITGA4-207ENST00000476089 Q5VSD8 79 aa11.86□□□□□ -0.51
ITGA4-207ENST00000476089 SPINK1P00995 79 aa11.84□□□□□ -0.51
ITGA4-207ENST00000476089 WFDC13Q8IUB5 93 aa11.83□□□□□ -0.51
ITGA4-207ENST00000476089 LINC00304Q8N9R0 145 aa11.82□□□□□ -0.52
ITGA4-207ENST00000476089 SPAG11AQ6PDA7 123 aa11.81□□□□□ -0.52
ITGA4-207ENST00000476089 CASC2Q6XLA1 102 aa11.81□□□□□ -0.52
ITGA4-207ENST00000476089 A0A1B0GVX0 72 aa11.81□□□□□ -0.52
ITGA4-207ENST00000476089 IGHV6-1A0A0B4J1U7 121 aa11.79□□□□□ -0.52
ITGA4-207ENST00000476089 OCR1Q9BZK8 76 aa11.77□□□□□ -0.52
ITGA4-207ENST00000476089 MMP24-AS1A0A0U1RRL7 71 aa11.76□□□□□ -0.53
ITGA4-207ENST00000476089 KRTAP29-1A8MX34 341 aaPredicted RBP11.76□□□□□ -0.53
ITGA4-207ENST00000476089 C1orf195Q5TG92 126 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms