RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CYSTM1Q9H1C7 97 aa11.28□□□□□ -0.6
ATG4B-217ENST00000475693 PLAC8Q9NZF1 115 aa11.28□□□□□ -0.6
ATG4B-217ENST00000475693 KCNQ1DNQ9H478 68 aa11.27□□□□□ -0.61
ATG4B-217ENST00000475693 Q6ZSA8 131 aa11.27□□□□□ -0.61
ATG4B-217ENST00000475693 GHRHP01286 108 aa11.25□□□□□ -0.61
ATG4B-217ENST00000475693 EPM2AB3EWF7 344 aa11.25□□□□□ -0.61
ATG4B-217ENST00000475693 DIRC1Q969H9 104 aa11.24□□□□□ -0.61
ATG4B-217ENST00000475693 FAM19A1Q7Z5A9 133 aa11.23□□□□□ -0.61
ATG4B-217ENST00000475693 DSCR8Q96T75 97 aa11.22□□□□□ -0.61
ATG4B-217ENST00000475693 LAMTOR3Q9UHA4 124 aa11.22□□□□□ -0.61
ATG4B-217ENST00000475693 VPS13BQ7Z7G8 4022 aa11.21□□□□□ -0.61
ATG4B-217ENST00000475693 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
ATG4B-217ENST00000475693 REG3GQ6UW15 175 aa11.21□□□□□ -0.61
ATG4B-217ENST00000475693 KRTAP4-16G5E9R7 235 aaPredicted RBP11.21□□□□□ -0.62
ATG4B-217ENST00000475693 FAT1Q14517 4588 aa11.2□□□□□ -0.62
ATG4B-217ENST00000475693 CXCL6P80162 114 aa11.2□□□□□ -0.62
ATG4B-217ENST00000475693 PRLHP81277 87 aa11.2□□□□□ -0.62
ATG4B-217ENST00000475693 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-217ENST00000475693 PRYO14603 147 aa11.19□□□□□ -0.62
ATG4B-217ENST00000475693 COX7BP24311 80 aa11.19□□□□□ -0.62
ATG4B-217ENST00000475693 SPRR1AP35321 89 aa11.19□□□□□ -0.62
ATG4B-217ENST00000475693 Q6ZQY7 126 aa11.19□□□□□ -0.62
ATG4B-217ENST00000475693 LINC01547P58512 204 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-217ENST00000475693 TRAV7A0A075B6U4 112 aa11.17□□□□□ -0.62
ATG4B-217ENST00000475693 ELOF1P60002 83 aaKnown RBP11.17□□□□□ -0.62
ATG4B-217ENST00000475693 PSORS1C2Q9UIG4 136 aa11.17□□□□□ -0.62
ATG4B-217ENST00000475693 ETDCA0A1B0GVM5 59 aa11.17□□□□□ -0.62
ATG4B-217ENST00000475693 Q6ZVQ6 151 aa11.17□□□□□ -0.62
ATG4B-217ENST00000475693 Q9BRP9 147 aa11.16□□□□□ -0.62
ATG4B-217ENST00000475693 TRBV7-4A0A0J9YYF1 115 aa11.16□□□□□ -0.62
ATG4B-217ENST00000475693 LINC00528Q8N1L1 170 aa11.16□□□□□ -0.62
ATG4B-217ENST00000475693 SMR3BP02814 79 aaPredicted RBP11.15□□□□□ -0.62
ATG4B-217ENST00000475693 ERC2-IT1O76042 136 aa11.14□□□□□ -0.63
ATG4B-217ENST00000475693 Q6ZRX8 168 aa11.13□□□□□ -0.63
ATG4B-217ENST00000475693 C1orf137Q5JT78 98 aa11.13□□□□□ -0.63
ATG4B-217ENST00000475693 KLKP1Q107X0 134 aa11.11□□□□□ -0.63
ATG4B-217ENST00000475693 C20orf197Q8N268 126 aa11.11□□□□□ -0.63
ATG4B-217ENST00000475693 HIGD2AQ9BW72 106 aa11.1□□□□□ -0.63
ATG4B-217ENST00000475693 KIAA1109Q2LD37 5005 aa11.1□□□□□ -0.63
ATG4B-217ENST00000475693 ST20-AS1Q8NBB2 130 aa11.09□□□□□ -0.63
ATG4B-217ENST00000475693 HSPG2P98160 4391 aa11.09□□□□□ -0.63
ATG4B-217ENST00000475693 UBE2AP49459 152 aa11.08□□□□□ -0.64
ATG4B-217ENST00000475693 OXTP01178 125 aa11.08□□□□□ -0.64
ATG4B-217ENST00000475693 DEFB105AQ8NG35 78 aa11.07□□□□□ -0.64
ATG4B-217ENST00000475693 FAM236DA0A1B0GTK5 79 aa11.06□□□□□ -0.64
ATG4B-217ENST00000475693 H7BZZ5 65 aa11.06□□□□□ -0.64
ATG4B-217ENST00000475693 FAM236CP0DP71 79 aa11.06□□□□□ -0.64
ATG4B-217ENST00000475693 RYR1P21817 5038 aa11.06□□□□□ -0.64
ATG4B-217ENST00000475693 KRTAP13-1Q8IUC0 172 aa11.05□□□□□ -0.64
ATG4B-217ENST00000475693 NDUFC1O43677 76 aa11.03□□□□□ -0.64
ATG4B-217ENST00000475693 SERP1Q9Y6X1 66 aa11.02□□□□□ -0.65
ATG4B-217ENST00000475693 DHRS4-AS1Q9P1J3 65 aa11.01□□□□□ -0.65
ATG4B-217ENST00000475693 IGLV7-43P04211 117 aa11□□□□□ -0.65
ATG4B-217ENST00000475693 Q5XG85 94 aa11□□□□□ -0.65
ATG4B-217ENST00000475693 KRTAP17-1Q9BYP8 105 aa10.99□□□□□ -0.65
ATG4B-217ENST00000475693 C4orf26Q17RF5 130 aa10.98□□□□□ -0.65
ATG4B-217ENST00000475693 ZNF861PO60384 105 aa10.97□□□□□ -0.65
ATG4B-217ENST00000475693 H0Y9J4 135 aa10.97□□□□□ -0.65
ATG4B-217ENST00000475693 ANAPC11Q9NYG5 84 aa10.97□□□□□ -0.65
ATG4B-217ENST00000475693 Q8N377 158 aa10.96□□□□□ -0.65
ATG4B-217ENST00000475693 A0A1B0GW54 56 aa10.96□□□□□ -0.66
ATG4B-217ENST00000475693 ATP5EP56381 51 aaPredicted RBP10.96□□□□□ -0.66
ATG4B-217ENST00000475693 HRCT1Q6UXD1 115 aa10.95□□□□□ -0.66
ATG4B-217ENST00000475693 RPL37AP61513 92 aaKnown RBP10.93□□□□□ -0.66
ATG4B-217ENST00000475693 NREPQ16612 68 aa10.92□□□□□ -0.66
ATG4B-217ENST00000475693 BPY2O14599 106 aa10.91□□□□□ -0.66
ATG4B-217ENST00000475693 IGLV5-48A0A075B6I7 105 aa10.9□□□□□ -0.66
ATG4B-217ENST00000475693 SNURFQ9Y675 71 aa10.9□□□□□ -0.66
ATG4B-217ENST00000475693 F8WEM9 126 aa10.9□□□□□ -0.66
ATG4B-217ENST00000475693 PRO0628Q9UI54 55 aa10.9□□□□□ -0.66
ATG4B-217ENST00000475693 KRTAP10-4P60372 401 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-217ENST00000475693 IGKV4-1P06312 121 aa10.89□□□□□ -0.67
ATG4B-217ENST00000475693 CDK2AP2O75956 126 aa10.88□□□□□ -0.67
ATG4B-217ENST00000475693 SMIM29Q86T20 159 aa10.87□□□□□ -0.67
ATG4B-217ENST00000475693 TMEM254Q8TBM7 123 aa10.87□□□□□ -0.67
ATG4B-217ENST00000475693 A0A0G2JQZ4 141 aa10.86□□□□□ -0.67
ATG4B-217ENST00000475693 SPRR4Q96PI1 79 aa10.86□□□□□ -0.67
ATG4B-217ENST00000475693 SMIM26A0A096LP01 95 aa10.86□□□□□ -0.67
ATG4B-217ENST00000475693 OCR1Q9BZK8 76 aa10.85□□□□□ -0.67
ATG4B-217ENST00000475693 BIRC6Q9NR09 4857 aa10.81□□□□□ -0.68
ATG4B-217ENST00000475693 Q5VSD8 79 aa10.81□□□□□ -0.68
ATG4B-217ENST00000475693 A0A0U1RQV1 116 aa10.8□□□□□ -0.68
ATG4B-217ENST00000475693 IGLV9-49A0A0B4J1Y8 123 aa10.8□□□□□ -0.68
ATG4B-217ENST00000475693 FAM229AH3BQW9 127 aa10.78□□□□□ -0.68
ATG4B-217ENST00000475693 Q8N9L7 120 aa10.78□□□□□ -0.68
ATG4B-217ENST00000475693 LRP1Q07954 4544 aaKnown RBP10.78□□□□□ -0.68
ATG4B-217ENST00000475693 SPRR1BP22528 89 aa10.77□□□□□ -0.68
ATG4B-217ENST00000475693 LINC00483Q53H64 154 aa10.76□□□□□ -0.69
ATG4B-217ENST00000475693 A0A087X002 238 aa10.76□□□□□ -0.69
ATG4B-217ENST00000475693 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
ATG4B-217ENST00000475693 SEC61GP60059 68 aa10.76□□□□□ -0.69
ATG4B-217ENST00000475693 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
ATG4B-217ENST00000475693 Q8NBF4 154 aa10.75□□□□□ -0.69
ATG4B-217ENST00000475693 ZNF706Q9Y5V0 76 aaPredicted RBP10.74□□□□□ -0.69
ATG4B-217ENST00000475693 A0A1W2PNM2 257 aa10.74□□□□□ -0.69
ATG4B-217ENST00000475693 SPINK6Q6UWN8 80 aa10.74□□□□□ -0.69
ATG4B-217ENST00000475693 PKHD1L1Q86WI1 4243 aa10.73□□□□□ -0.69
ATG4B-217ENST00000475693 PLA2G1BP04054 148 aaKnown RBP10.73□□□□□ -0.69
ATG4B-217ENST00000475693 MYCBP2O75592 4640 aa10.72□□□□□ -0.69
ATG4B-217ENST00000475693 FLG2Q5D862 2391 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms