RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TNP2Q05952 138 aa13.59□□□□□ -0.23
SH3D21-202ENST00000474766 ETDCA0A1B0GVM5 59 aa13.59□□□□□ -0.23
SH3D21-202ENST00000474766 NKAPP1Q8N9T2 125 aa13.58□□□□□ -0.24
SH3D21-202ENST00000474766 Q8NBF4 154 aa13.58□□□□□ -0.24
SH3D21-202ENST00000474766 DEFB105AQ8NG35 78 aa13.58□□□□□ -0.24
SH3D21-202ENST00000474766 SPRR4Q96PI1 79 aa13.58□□□□□ -0.24
SH3D21-202ENST00000474766 RYR3Q15413 4870 aa13.57□□□□□ -0.24
SH3D21-202ENST00000474766 CYP4F30PQ9H0H9 118 aa13.56□□□□□ -0.24
SH3D21-202ENST00000474766 PLA2G2DQ9UNK4 145 aa13.56□□□□□ -0.24
SH3D21-202ENST00000474766 SERTAD4-AS1Q5TG53 156 aa13.56□□□□□ -0.24
SH3D21-202ENST00000474766 C1orf64Q8NEQ6 169 aa13.56□□□□□ -0.24
SH3D21-202ENST00000474766 LINC00476Q8WZB0 136 aa13.56□□□□□ -0.24
SH3D21-202ENST00000474766 HYDINQ4G0P3 5121 aa13.55□□□□□ -0.24
SH3D21-202ENST00000474766 RYR2Q92736 4967 aa13.55□□□□□ -0.24
SH3D21-202ENST00000474766 C1orf137Q5JT78 98 aa13.55□□□□□ -0.24
SH3D21-202ENST00000474766 C7orf33Q8WU49 177 aa13.55□□□□□ -0.24
SH3D21-202ENST00000474766 Q6ZRX8 168 aa13.54□□□□□ -0.24
SH3D21-202ENST00000474766 MRPL55Q7Z7F7 128 aaKnown RBP13.52□□□□□ -0.24
SH3D21-202ENST00000474766 VPS13DQ5THJ4 4388 aa13.52□□□□□ -0.24
SH3D21-202ENST00000474766 DSCR10P59022 87 aa13.52□□□□□ -0.25
SH3D21-202ENST00000474766 KRTAP4-16G5E9R7 235 aaPredicted RBP13.51□□□□□ -0.25
SH3D21-202ENST00000474766 LY6G6CO95867 125 aa13.51□□□□□ -0.25
SH3D21-202ENST00000474766 IGLV5-37A0A075B6J1 123 aa13.5□□□□□ -0.25
SH3D21-202ENST00000474766 SPRR1AP35321 89 aa13.49□□□□□ -0.25
SH3D21-202ENST00000474766 NDUFB1O75438 58 aa13.49□□□□□ -0.25
SH3D21-202ENST00000474766 KMT2AQ03164 3969 aa13.48□□□□□ -0.25
SH3D21-202ENST00000474766 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.48□□□□□ -0.25
SH3D21-202ENST00000474766 Q9BRP9 147 aa13.47□□□□□ -0.25
SH3D21-202ENST00000474766 HCG22E2RYF7 251 aa13.45□□□□□ -0.26
SH3D21-202ENST00000474766 K7EQZ3 153 aa13.45□□□□□ -0.26
SH3D21-202ENST00000474766 KRTAP7-1Q8IUC3 87 aa13.44□□□□□ -0.26
SH3D21-202ENST00000474766 IGLV1-50A0A075B6I6 118 aa13.44□□□□□ -0.26
SH3D21-202ENST00000474766 FAM168BA1KXE4 195 aa13.44□□□□□ -0.26
SH3D21-202ENST00000474766 TRAV22A0A0B4J277 110 aa13.4□□□□□ -0.26
SH3D21-202ENST00000474766 RPL37AP8A6NKH3 93 aa13.4□□□□□ -0.26
SH3D21-202ENST00000474766 DNAH6Q9C0G6 4158 aa13.39□□□□□ -0.27
SH3D21-202ENST00000474766 LRCOL1A6NCL2 159 aa13.39□□□□□ -0.27
SH3D21-202ENST00000474766 ST20-AS1Q8NBB2 130 aa13.39□□□□□ -0.27
SH3D21-202ENST00000474766 UBE2DNLQ8IWF7 75 aa13.38□□□□□ -0.27
SH3D21-202ENST00000474766 PSCAO43653 123 aa13.37□□□□□ -0.27
SH3D21-202ENST00000474766 MP68P56378 58 aa13.35□□□□□ -0.27
SH3D21-202ENST00000474766 KRTAP1-5Q9BYS1 174 aa13.34□□□□□ -0.27
SH3D21-202ENST00000474766 PSPHP1O15172 72 aa13.32□□□□□ -0.28
SH3D21-202ENST00000474766 H3BPC8 53 aa13.31□□□□□ -0.28
SH3D21-202ENST00000474766 SPANXA2-OT1Q8N9U9 137 aa13.31□□□□□ -0.28
SH3D21-202ENST00000474766 RBM12B-AS1Q9P1G2 102 aa13.3□□□□□ -0.28
SH3D21-202ENST00000474766 CNBPP62633 177 aaKnown RBP13.28□□□□□ -0.28
SH3D21-202ENST00000474766 UBE2BP63146 152 aa13.28□□□□□ -0.28
SH3D21-202ENST00000474766 KTN1-AS1Q86SY8 53 aa13.28□□□□□ -0.28
SH3D21-202ENST00000474766 DNAH10Q8IVF4 4471 aa13.27□□□□□ -0.29
SH3D21-202ENST00000474766 IGLV8-61A0A075B6I0 122 aa13.26□□□□□ -0.29
SH3D21-202ENST00000474766 PRR4Q16378 134 aa13.25□□□□□ -0.29
SH3D21-202ENST00000474766 REG3GQ6UW15 175 aa13.25□□□□□ -0.29
SH3D21-202ENST00000474766 C16orf90A8MZG2 172 aa13.24□□□□□ -0.29
SH3D21-202ENST00000474766 IGFL1Q6UW32 110 aa13.24□□□□□ -0.29
SH3D21-202ENST00000474766 KRTAP29-1A8MX34 341 aaPredicted RBP13.23□□□□□ -0.29
SH3D21-202ENST00000474766 Q6ZR54 194 aa13.23□□□□□ -0.29
SH3D21-202ENST00000474766 DNAH2Q9P225 4427 aa13.23□□□□□ -0.29
SH3D21-202ENST00000474766 A0A096LNI7 61 aa13.23□□□□□ -0.29
SH3D21-202ENST00000474766 A8MUN3 132 aa13.22□□□□□ -0.29
SH3D21-202ENST00000474766 LIMD2Q9BT23 127 aa13.22□□□□□ -0.29
SH3D21-202ENST00000474766 FRAS1Q86XX4 4008 aa13.21□□□□□ -0.29
SH3D21-202ENST00000474766 Q5VV11 94 aa13.21□□□□□ -0.29
SH3D21-202ENST00000474766 WFDC13Q8IUB5 93 aa13.21□□□□□ -0.29
SH3D21-202ENST00000474766 NBDYA0A0U1RRE5 68 aa13.2□□□□□ -0.3
SH3D21-202ENST00000474766 LINC00208Q96KT6 92 aa13.2□□□□□ -0.3
SH3D21-202ENST00000474766 A0A1W2PNN7 141 aa13.17□□□□□ -0.3
SH3D21-202ENST00000474766 IGKV2-24A0A0C4DH68 120 aa13.16□□□□□ -0.3
SH3D21-202ENST00000474766 UBE2AP49459 152 aa13.16□□□□□ -0.3
SH3D21-202ENST00000474766 C14orf177Q52M58 125 aa13.16□□□□□ -0.3
SH3D21-202ENST00000474766 A0A087WSZ3 146 aa13.15□□□□□ -0.3
SH3D21-202ENST00000474766 H0Y9P7 68 aa13.15□□□□□ -0.3
SH3D21-202ENST00000474766 Q8N9P0 234 aaPredicted RBP13.15□□□□□ -0.3
SH3D21-202ENST00000474766 NDUFS5O43920 106 aa13.15□□□□□ -0.3
SH3D21-202ENST00000474766 RTL8CO15255 209 aa13.13□□□□□ -0.31
SH3D21-202ENST00000474766 CASC2Q6XLA1 102 aa13.12□□□□□ -0.31
SH3D21-202ENST00000474766 FAT2Q9NYQ8 4349 aa13.12□□□□□ -0.31
SH3D21-202ENST00000474766 DEFB116Q30KQ4 102 aa13.12□□□□□ -0.31
SH3D21-202ENST00000474766 C1orf134Q5TEV5 83 aa13.1□□□□□ -0.31
SH3D21-202ENST00000474766 C9orf163Q8N9P6 203 aa13.1□□□□□ -0.31
SH3D21-202ENST00000474766 EPPK1P58107 5090 aaKnown RBP13.1□□□□□ -0.31
SH3D21-202ENST00000474766 DNAH17Q9UFH2 4485 aa13.1□□□□□ -0.31
SH3D21-202ENST00000474766 A0A0G2JQZ4 141 aa13.08□□□□□ -0.31
SH3D21-202ENST00000474766 A8MWP4 228 aa13.08□□□□□ -0.32
SH3D21-202ENST00000474766 PRLHP81277 87 aa13.07□□□□□ -0.32
SH3D21-202ENST00000474766 CHKB-CPT1BH3BT56 60 aa13.06□□□□□ -0.32
SH3D21-202ENST00000474766 RPL37AP61513 92 aaKnown RBP13.06□□□□□ -0.32
SH3D21-202ENST00000474766 Q6ZRN7 208 aaPredicted RBP13.05□□□□□ -0.32
SH3D21-202ENST00000474766 CHTF8P0CG12 524 aa13.05□□□□□ -0.32
SH3D21-202ENST00000474766 Q75L30 129 aa13.04□□□□□ -0.32
SH3D21-202ENST00000474766 LOC101927531A0A1B0GV80 90 aa13.03□□□□□ -0.32
SH3D21-202ENST00000474766 KRTAP11-1Q8IUC1 163 aa13.03□□□□□ -0.32
SH3D21-202ENST00000474766 LINC00472Q9H8W2 130 aa13.03□□□□□ -0.32
SH3D21-202ENST00000474766 SPRR1BP22528 89 aa13.02□□□□□ -0.33
SH3D21-202ENST00000474766 PHF5AQ7RTV0 110 aaKnown RBP13.02□□□□□ -0.33
SH3D21-202ENST00000474766 PRR15LQ9BU68 103 aa13.02□□□□□ -0.33
SH3D21-202ENST00000474766 HECTD4Q9Y4D8 3996 aa13.02□□□□□ -0.33
SH3D21-202ENST00000474766 H0Y9J4 135 aa13.01□□□□□ -0.33
SH3D21-202ENST00000474766 IGLV7-46A0A075B6I9 117 aa13.01□□□□□ -0.33
SH3D21-202ENST00000474766 H3BS24 57 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms