RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 RBM3P98179 157 aaKnown RBP12.41□□□□□ -0.42
EDEM3-206ENST00000474725 DEFB105AQ8NG35 78 aa12.41□□□□□ -0.42
EDEM3-206ENST00000474725 LAMTOR3Q9UHA4 124 aa12.41□□□□□ -0.42
EDEM3-206ENST00000474725 LINC01547P58512 204 aaPredicted RBP12.39□□□□□ -0.43
EDEM3-206ENST00000474725 IGLV7-43P04211 117 aa12.39□□□□□ -0.43
EDEM3-206ENST00000474725 LOC110117498A0A087WWA1 95 aa12.37□□□□□ -0.43
EDEM3-206ENST00000474725 ZNF861PO60384 105 aa12.37□□□□□ -0.43
EDEM3-206ENST00000474725 Q8N377 158 aa12.37□□□□□ -0.43
EDEM3-206ENST00000474725 Q6JHZ5 121 aa12.37□□□□□ -0.43
EDEM3-206ENST00000474725 IGLV5-48A0A075B6I7 105 aa12.35□□□□□ -0.43
EDEM3-206ENST00000474725 Q6ZQT0 140 aa12.35□□□□□ -0.43
EDEM3-206ENST00000474725 SMR3BP02814 79 aaPredicted RBP12.35□□□□□ -0.43
EDEM3-206ENST00000474725 DSCR8Q96T75 97 aa12.35□□□□□ -0.43
EDEM3-206ENST00000474725 PDE6GP18545 87 aa12.34□□□□□ -0.43
EDEM3-206ENST00000474725 APOBP04114 4563 aaKnown RBP12.33□□□□□ -0.44
EDEM3-206ENST00000474725 FAM236AA0A1B0GUQ0 79 aa12.33□□□□□ -0.44
EDEM3-206ENST00000474725 FAM236BA0A1B0GV22 79 aa12.33□□□□□ -0.44
EDEM3-206ENST00000474725 C3orf22Q8N5N4 141 aa12.29□□□□□ -0.44
EDEM3-206ENST00000474725 UBL5Q9BZL1 73 aa12.29□□□□□ -0.44
EDEM3-206ENST00000474725 IGKV3D-7A0A0C4DH55 119 aa12.28□□□□□ -0.44
EDEM3-206ENST00000474725 RPL37AP61513 92 aaKnown RBP12.28□□□□□ -0.44
EDEM3-206ENST00000474725 ATP5EP2Q5VTU8 51 aa12.28□□□□□ -0.44
EDEM3-206ENST00000474725 SRRM2Q9UQ35 2752 aaKnown RBP12.28□□□□□ -0.44
EDEM3-206ENST00000474725 SMIM29Q86T20 159 aa12.27□□□□□ -0.45
EDEM3-206ENST00000474725 SPRR4Q96PI1 79 aa12.27□□□□□ -0.45
EDEM3-206ENST00000474725 TRBV7-4A0A0J9YYF1 115 aa12.26□□□□□ -0.45
EDEM3-206ENST00000474725 SPRR1BP22528 89 aa12.25□□□□□ -0.45
EDEM3-206ENST00000474725 ZNF706Q9Y5V0 76 aaPredicted RBP12.23□□□□□ -0.45
EDEM3-206ENST00000474725 CDK2AP2O75956 126 aa12.23□□□□□ -0.45
EDEM3-206ENST00000474725 HIST1H4AP62805 103 aaKnown RBP12.22□□□□□ -0.45
EDEM3-206ENST00000474725 VPS13BQ7Z7G8 4022 aa12.21□□□□□ -0.46
EDEM3-206ENST00000474725 LINC00483Q53H64 154 aa12.19□□□□□ -0.46
EDEM3-206ENST00000474725 CCDC179H3BU77 68 aa12.19□□□□□ -0.46
EDEM3-206ENST00000474725 ANAPC11Q9NYG5 84 aa12.19□□□□□ -0.46
EDEM3-206ENST00000474725 ATOX1O00244 68 aa12.17□□□□□ -0.46
EDEM3-206ENST00000474725 KRTAP10-4P60372 401 aaPredicted RBP12.17□□□□□ -0.46
EDEM3-206ENST00000474725 F8WEM9 126 aa12.16□□□□□ -0.46
EDEM3-206ENST00000474725 EPPK1P58107 5090 aaKnown RBP12.16□□□□□ -0.46
EDEM3-206ENST00000474725 A0A087WVE0 104 aa12.15□□□□□ -0.46
EDEM3-206ENST00000474725 Q6ZVQ6 151 aa12.15□□□□□ -0.46
EDEM3-206ENST00000474725 SPINK6Q6UWN8 80 aa12.12□□□□□ -0.47
EDEM3-206ENST00000474725 FAT1Q14517 4588 aa12.12□□□□□ -0.47
EDEM3-206ENST00000474725 IGLV8-61A0A075B6I0 122 aa12.11□□□□□ -0.47
EDEM3-206ENST00000474725 FAM229AH3BQW9 127 aa12.11□□□□□ -0.47
EDEM3-206ENST00000474725 IGLV9-49A0A0B4J1Y8 123 aa12.1□□□□□ -0.47
EDEM3-206ENST00000474725 CXCL6P80162 114 aa12.09□□□□□ -0.47
EDEM3-206ENST00000474725 UQCRQO14949 82 aa12.09□□□□□ -0.47
EDEM3-206ENST00000474725 A0A0G2JQZ4 141 aa12.08□□□□□ -0.48
EDEM3-206ENST00000474725 PLA2G1BP04054 148 aaKnown RBP12.08□□□□□ -0.48
EDEM3-206ENST00000474725 HSPG2P98160 4391 aa12.08□□□□□ -0.48
EDEM3-206ENST00000474725 RYR1P21817 5038 aa12.07□□□□□ -0.48
EDEM3-206ENST00000474725 IGFL1Q6UW32 110 aa12.07□□□□□ -0.48
EDEM3-206ENST00000474725 KRTAP1-4P0C5Y4 121 aa12.06□□□□□ -0.48
EDEM3-206ENST00000474725 C9orf153Q5TBE3 101 aa12.06□□□□□ -0.48
EDEM3-206ENST00000474725 COX7CP15954 63 aa12.05□□□□□ -0.48
EDEM3-206ENST00000474725 Q5VSD8 79 aa12.05□□□□□ -0.48
EDEM3-206ENST00000474725 KRTAP17-1Q9BYP8 105 aa12.05□□□□□ -0.48
EDEM3-206ENST00000474725 MOBPQ13875 183 aa12.03□□□□□ -0.48
EDEM3-206ENST00000474725 A0A1B0GW54 56 aa12.03□□□□□ -0.48
EDEM3-206ENST00000474725 A0A1W2PNM2 257 aa12.02□□□□□ -0.49
EDEM3-206ENST00000474725 A0A087X002 238 aa12.01□□□□□ -0.49
EDEM3-206ENST00000474725 FAM229BQ4G0N7 80 aa12.01□□□□□ -0.49
EDEM3-206ENST00000474725 SERP2Q8N6R1 65 aa12.01□□□□□ -0.49
EDEM3-206ENST00000474725 Q8NBF4 154 aa12□□□□□ -0.49
EDEM3-206ENST00000474725 KIAA1109Q2LD37 5005 aa12□□□□□ -0.49
EDEM3-206ENST00000474725 NREPQ16612 68 aa11.98□□□□□ -0.49
EDEM3-206ENST00000474725 KRTAP13-2Q52LG2 175 aa11.98□□□□□ -0.49
EDEM3-206ENST00000474725 CRYGAP11844 174 aa11.97□□□□□ -0.49
EDEM3-206ENST00000474725 Q8N1X5 172 aa11.96□□□□□ -0.49
EDEM3-206ENST00000474725 SS18L2Q9UHA2 77 aa11.95□□□□□ -0.5
EDEM3-206ENST00000474725 SSBP3-AS1Q7Z2R9 100 aa11.93□□□□□ -0.5
EDEM3-206ENST00000474725 HRCT1Q6UXD1 115 aa11.9□□□□□ -0.5
EDEM3-206ENST00000474725 PKHD1L1Q86WI1 4243 aa11.9□□□□□ -0.5
EDEM3-206ENST00000474725 PRR26Q8N8Z3 221 aa11.9□□□□□ -0.51
EDEM3-206ENST00000474725 BPY2O14599 106 aa11.89□□□□□ -0.51
EDEM3-206ENST00000474725 SMIM20Q8N5G0 67 aa11.88□□□□□ -0.51
EDEM3-206ENST00000474725 TYMSOSQ8TAI1 123 aa11.86□□□□□ -0.51
EDEM3-206ENST00000474725 A0A087WSZ3 146 aa11.86□□□□□ -0.51
EDEM3-206ENST00000474725 TRAV7A0A075B6U4 112 aa11.84□□□□□ -0.51
EDEM3-206ENST00000474725 IGKV4-1P06312 121 aa11.84□□□□□ -0.51
EDEM3-206ENST00000474725 Q8N9L7 120 aa11.81□□□□□ -0.52
EDEM3-206ENST00000474725 CD164Q04900 197 aa11.8□□□□□ -0.52
EDEM3-206ENST00000474725 BIRC6Q9NR09 4857 aa11.78□□□□□ -0.52
EDEM3-206ENST00000474725 KRTAP4-5Q9BYR2 181 aa11.76□□□□□ -0.53
EDEM3-206ENST00000474725 CYSTM1Q9H1C7 97 aa11.76□□□□□ -0.53
EDEM3-206ENST00000474725 C20orf197Q8N268 126 aa11.73□□□□□ -0.53
EDEM3-206ENST00000474725 C4orf48Q5BLP8 95 aa11.72□□□□□ -0.53
EDEM3-206ENST00000474725 TMEM258P61165 79 aa11.72□□□□□ -0.53
EDEM3-206ENST00000474725 LINC00304Q8N9R0 145 aa11.72□□□□□ -0.53
EDEM3-206ENST00000474725 DSCR10P59022 87 aa11.7□□□□□ -0.54
EDEM3-206ENST00000474725 DEFB116Q30KQ4 102 aa11.7□□□□□ -0.54
EDEM3-206ENST00000474725 KRTAP10-8P60410 259 aa11.68□□□□□ -0.54
EDEM3-206ENST00000474725 LINC00472Q9H8W2 130 aa11.68□□□□□ -0.54
EDEM3-206ENST00000474725 SPINK1P00995 79 aa11.67□□□□□ -0.54
EDEM3-206ENST00000474725 LRP1Q07954 4544 aaKnown RBP11.66□□□□□ -0.54
EDEM3-206ENST00000474725 KLKP1Q107X0 134 aa11.66□□□□□ -0.54
EDEM3-206ENST00000474725 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
EDEM3-206ENST00000474725 Q96NJ1 140 aa11.66□□□□□ -0.54
EDEM3-206ENST00000474725 K7EQZ3 153 aa11.64□□□□□ -0.55
EDEM3-206ENST00000474725 OCR1Q9BZK8 76 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms