RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 UBE2AP49459 152 aa8.84□□□□□ -0.99
RPGR-206ENST00000474584 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.82□□□□□ -1
RPGR-206ENST00000474584 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
RPGR-206ENST00000474584 MPLKIPQ8TAP9 179 aa8.82□□□□□ -1
RPGR-206ENST00000474584 C14orf177Q52M58 125 aa8.82□□□□□ -1
RPGR-206ENST00000474584 UBE2DNLQ8IWF7 75 aa8.81□□□□□ -1
RPGR-206ENST00000474584 WFDC13Q8IUB5 93 aa8.8□□□□□ -1
RPGR-206ENST00000474584 hDV103S1A0JD37 113 aa8.79□□□□□ -1
RPGR-206ENST00000474584 HUWE1Q7Z6Z7 4374 aaKnown RBP8.78□□□□□ -1
RPGR-206ENST00000474584 H0Y9J4 135 aa8.78□□□□□ -1
RPGR-206ENST00000474584 NDUFB1O75438 58 aa8.78□□□□□ -1
RPGR-206ENST00000474584 MP68P56378 58 aa8.78□□□□□ -1
RPGR-206ENST00000474584 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
RPGR-206ENST00000474584 COL6A5A8TX70 2615 aa8.77□□□□□ -1
RPGR-206ENST00000474584 CHTF8P0CG12 524 aa8.77□□□□□ -1.01
RPGR-206ENST00000474584 SPRR1BP22528 89 aa8.77□□□□□ -1.01
RPGR-206ENST00000474584 C1orf64Q8NEQ6 169 aa8.76□□□□□ -1.01
RPGR-206ENST00000474584 RPL37AP61513 92 aaKnown RBP8.75□□□□□ -1.01
RPGR-206ENST00000474584 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
RPGR-206ENST00000474584 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
RPGR-206ENST00000474584 BRK1Q8WUW1 75 aa8.74□□□□□ -1.01
RPGR-206ENST00000474584 B9D2Q9BPU9 175 aa8.74□□□□□ -1.01
RPGR-206ENST00000474584 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
RPGR-206ENST00000474584 DNAH10Q8IVF4 4471 aa8.73□□□□□ -1.01
RPGR-206ENST00000474584 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
RPGR-206ENST00000474584 CASC2Q6XLA1 102 aa8.73□□□□□ -1.01
RPGR-206ENST00000474584 PRR15Q8IV56 129 aa8.72□□□□□ -1.01
RPGR-206ENST00000474584 LYSTQ99698 3801 aa8.72□□□□□ -1.01
RPGR-206ENST00000474584 APLNQ9ULZ1 77 aa8.72□□□□□ -1.01
RPGR-206ENST00000474584 A8MWP4 228 aa8.71□□□□□ -1.01
RPGR-206ENST00000474584 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.01
RPGR-206ENST00000474584 TRAV22A0A0B4J277 110 aa8.71□□□□□ -1.02
RPGR-206ENST00000474584 STAB2Q8WWQ8 2551 aa8.71□□□□□ -1.02
RPGR-206ENST00000474584 LINC00208Q96KT6 92 aa8.7□□□□□ -1.02
RPGR-206ENST00000474584 LINC00472Q9H8W2 130 aa8.7□□□□□ -1.02
RPGR-206ENST00000474584 LRCOL1A6NCL2 159 aa8.69□□□□□ -1.02
RPGR-206ENST00000474584 PRR4Q16378 134 aa8.69□□□□□ -1.02
RPGR-206ENST00000474584 COL7A1Q02388 2944 aa8.68□□□□□ -1.02
RPGR-206ENST00000474584 H0Y9P7 68 aa8.68□□□□□ -1.02
RPGR-206ENST00000474584 H3BPC8 53 aa8.68□□□□□ -1.02
RPGR-206ENST00000474584 Q1T7F1 81 aa8.68□□□□□ -1.02
RPGR-206ENST00000474584 SRRM2Q9UQ35 2752 aaKnown RBP8.68□□□□□ -1.02
RPGR-206ENST00000474584 DNAH9Q9NYC9 4486 aa8.66□□□□□ -1.02
RPGR-206ENST00000474584 MGAM2Q2M2H8 2515 aa8.65□□□□□ -1.02
RPGR-206ENST00000474584 NBDYA0A0U1RRE5 68 aa8.63□□□□□ -1.03
RPGR-206ENST00000474584 KRTAP13-1Q8IUC0 172 aa8.63□□□□□ -1.03
RPGR-206ENST00000474584 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
RPGR-206ENST00000474584 PANO1I0J062 215 aa8.61□□□□□ -1.03
RPGR-206ENST00000474584 MMP24-AS1A0A0U1RRL7 71 aa8.6□□□□□ -1.03
RPGR-206ENST00000474584 IGLV9-49A0A0B4J1Y8 123 aa8.59□□□□□ -1.03
RPGR-206ENST00000474584 Q6ZRN7 208 aaPredicted RBP8.59□□□□□ -1.03
RPGR-206ENST00000474584 V9GYY9 64 aa8.59□□□□□ -1.03
RPGR-206ENST00000474584 TENM2Q9NT68 2774 aa8.59□□□□□ -1.04
RPGR-206ENST00000474584 MDFIQ99750 246 aa8.58□□□□□ -1.04
RPGR-206ENST00000474584 NUPR2A6NF83 97 aa8.57□□□□□ -1.04
RPGR-206ENST00000474584 SPACA4Q8TDM5 124 aa8.57□□□□□ -1.04
RPGR-206ENST00000474584 PSPHP1O15172 72 aa8.57□□□□□ -1.04
RPGR-206ENST00000474584 DNAH7Q8WXX0 4024 aa8.56□□□□□ -1.04
RPGR-206ENST00000474584 MOBPQ13875 183 aa8.55□□□□□ -1.04
RPGR-206ENST00000474584 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.55□□□□□ -1.04
RPGR-206ENST00000474584 Q96NJ1 140 aa8.54□□□□□ -1.04
RPGR-206ENST00000474584 DYNC2H1Q8NCM8 4307 aaKnown RBP8.54□□□□□ -1.04
RPGR-206ENST00000474584 LINC00483Q53H64 154 aa8.54□□□□□ -1.04
RPGR-206ENST00000474584 ZNF706Q9Y5V0 76 aaPredicted RBP8.54□□□□□ -1.04
RPGR-206ENST00000474584 CSMD3Q7Z407 3707 aa8.53□□□□□ -1.04
RPGR-206ENST00000474584 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
RPGR-206ENST00000474584 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
RPGR-206ENST00000474584 C1orf195Q5TG92 126 aa8.5□□□□□ -1.05
RPGR-206ENST00000474584 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
RPGR-206ENST00000474584 A8MUN3 132 aa8.49□□□□□ -1.05
RPGR-206ENST00000474584 IGLV7-46A0A075B6I9 117 aa8.48□□□□□ -1.05
RPGR-206ENST00000474584 A0A087WTM6 91 aa8.48□□□□□ -1.05
RPGR-206ENST00000474584 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
RPGR-206ENST00000474584 DNHD1Q96M86 4753 aa8.48□□□□□ -1.05
RPGR-206ENST00000474584 WWC2-AS2Q96NR7 200 aa8.47□□□□□ -1.05
RPGR-206ENST00000474584 LIMD2Q9BT23 127 aa8.47□□□□□ -1.05
RPGR-206ENST00000474584 A0A1B0GVX0 72 aa8.47□□□□□ -1.05
RPGR-206ENST00000474584 IGLV5-52A0A0A0MRZ9 124 aa8.46□□□□□ -1.05
RPGR-206ENST00000474584 IGHV6-1A0A0B4J1U7 121 aa8.46□□□□□ -1.05
RPGR-206ENST00000474584 PSORS1C2Q9UIG4 136 aa8.46□□□□□ -1.05
RPGR-206ENST00000474584 Q8N9P0 234 aaPredicted RBP8.46□□□□□ -1.06
RPGR-206ENST00000474584 NDUFS5O43920 106 aa8.45□□□□□ -1.06
RPGR-206ENST00000474584 Q6ZR54 194 aa8.45□□□□□ -1.06
RPGR-206ENST00000474584 RTL8CO15255 209 aa8.45□□□□□ -1.06
RPGR-206ENST00000474584 PCOTHQ58A44 107 aa8.45□□□□□ -1.06
RPGR-206ENST00000474584 COA5Q86WW8 74 aa8.45□□□□□ -1.06
RPGR-206ENST00000474584 PLECQ15149 4684 aaKnown RBP8.44□□□□□ -1.06
RPGR-206ENST00000474584 Q5VV11 94 aa8.43□□□□□ -1.06
RPGR-206ENST00000474584 ZNF861PO60384 105 aa8.42□□□□□ -1.06
RPGR-206ENST00000474584 CD164Q04900 197 aa8.42□□□□□ -1.06
RPGR-206ENST00000474584 MRPL34Q9BQ48 92 aaKnown RBP8.42□□□□□ -1.06
RPGR-206ENST00000474584 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
RPGR-206ENST00000474584 PRR15LQ9BU68 103 aa8.41□□□□□ -1.06
RPGR-206ENST00000474584 KRTAP21-3Q3LHN1 58 aa8.4□□□□□ -1.07
RPGR-206ENST00000474584 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.07
RPGR-206ENST00000474584 CHKB-CPT1BH3BT56 60 aa8.38□□□□□ -1.07
RPGR-206ENST00000474584 HECTD4Q9Y4D8 3996 aa8.35□□□□□ -1.07
RPGR-206ENST00000474584 A0A087X002 238 aa8.34□□□□□ -1.07
RPGR-206ENST00000474584 NOTCH2NLQ7Z3S9 236 aa8.34□□□□□ -1.07
RPGR-206ENST00000474584 VPS13DQ5THJ4 4388 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms