RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 Q6JHZ5 121 aa10.96□□□□□ -0.65
PDLIM4-206ENST00000474421 Q6ZQY7 126 aa10.96□□□□□ -0.65
PDLIM4-206ENST00000474421 KRTAP19-2Q3LHN2 52 aa10.94□□□□□ -0.66
PDLIM4-206ENST00000474421 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
PDLIM4-206ENST00000474421 LCE2DQ5TA82 110 aaPredicted RBP10.92□□□□□ -0.66
PDLIM4-206ENST00000474421 BVES-AS1Q5T3Y7 98 aa10.91□□□□□ -0.66
PDLIM4-206ENST00000474421 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.91□□□□□ -0.66
PDLIM4-206ENST00000474421 CLEC2BQ92478 149 aa10.91□□□□□ -0.66
PDLIM4-206ENST00000474421 PPDPFLQ8WWR9 84 aa10.9□□□□□ -0.66
PDLIM4-206ENST00000474421 OCIAD2Q56VL3 154 aa10.89□□□□□ -0.67
PDLIM4-206ENST00000474421 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
PDLIM4-206ENST00000474421 TRBV7-7A0A0K0K1E9 115 aa10.88□□□□□ -0.67
PDLIM4-206ENST00000474421 SCGB1D1O95968 90 aa10.87□□□□□ -0.67
PDLIM4-206ENST00000474421 CFC1BP0CG36 223 aa10.87□□□□□ -0.67
PDLIM4-206ENST00000474421 MT1HP80294 61 aa10.87□□□□□ -0.67
PDLIM4-206ENST00000474421 IGFL1Q6UW32 110 aa10.87□□□□□ -0.67
PDLIM4-206ENST00000474421 C12orf57Q99622 126 aa10.86□□□□□ -0.67
PDLIM4-206ENST00000474421 COX8AP10176 69 aa10.85□□□□□ -0.67
PDLIM4-206ENST00000474421 SNHG12Q9BXW3 62 aa10.85□□□□□ -0.67
PDLIM4-206ENST00000474421 DLEU1O43261 78 aa10.82□□□□□ -0.68
PDLIM4-206ENST00000474421 SNCGO76070 127 aa10.82□□□□□ -0.68
PDLIM4-206ENST00000474421 COX6B2Q6YFQ2 88 aa10.77□□□□□ -0.69
PDLIM4-206ENST00000474421 RAB37Q96AX2 223 aa10.77□□□□□ -0.69
PDLIM4-206ENST00000474421 LST1O00453 97 aa10.76□□□□□ -0.69
PDLIM4-206ENST00000474421 CFC1P0CG37 223 aa10.76□□□□□ -0.69
PDLIM4-206ENST00000474421 H0YGX0 51 aa10.75□□□□□ -0.69
PDLIM4-206ENST00000474421 H3BUT2 72 aa10.75□□□□□ -0.69
PDLIM4-206ENST00000474421 OBSCN-AS1Q96MR7 158 aa10.74□□□□□ -0.69
PDLIM4-206ENST00000474421 HIGD1BQ9P298 99 aa10.74□□□□□ -0.69
PDLIM4-206ENST00000474421 SS18L2Q9UHA2 77 aa10.74□□□□□ -0.69
PDLIM4-206ENST00000474421 A0A0B4J2C4 111 aa10.73□□□□□ -0.69
PDLIM4-206ENST00000474421 ATP11AUNQ6ZP68 121 aa10.73□□□□□ -0.69
PDLIM4-206ENST00000474421 Q75L30 129 aa10.73□□□□□ -0.69
PDLIM4-206ENST00000474421 FSIP2Q5CZC0 6907 aa10.72□□□□□ -0.69
PDLIM4-206ENST00000474421 M0R2T5 61 aa10.72□□□□□ -0.69
PDLIM4-206ENST00000474421 Q6Q795 121 aa10.72□□□□□ -0.69
PDLIM4-206ENST00000474421 C14orf144Q96I85 54 aa10.72□□□□□ -0.69
PDLIM4-206ENST00000474421 GHRHP01286 108 aa10.7□□□□□ -0.7
PDLIM4-206ENST00000474421 KRTAP10-6P60371 365 aaPredicted RBP10.7□□□□□ -0.7
PDLIM4-206ENST00000474421 LORP23490 312 aaPredicted RBP10.69□□□□□ -0.7
PDLIM4-206ENST00000474421 TEN1Q86WV5 123 aa10.69□□□□□ -0.7
PDLIM4-206ENST00000474421 CRCT1Q9UGL9 99 aa10.69□□□□□ -0.7
PDLIM4-206ENST00000474421 PAM16Q9Y3D7 125 aa10.69□□□□□ -0.7
PDLIM4-206ENST00000474421 NDUFV3P56181 108 aaKnown RBP10.68□□□□□ -0.7
PDLIM4-206ENST00000474421 SPATA45Q537H7 98 aa10.68□□□□□ -0.7
PDLIM4-206ENST00000474421 FLGP20930 4061 aaPredicted RBP10.67□□□□□ -0.7
PDLIM4-206ENST00000474421 A0A1B0GX51 115 aa10.66□□□□□ -0.7
PDLIM4-206ENST00000474421 VAMP8Q9BV40 100 aa10.66□□□□□ -0.7
PDLIM4-206ENST00000474421 FAM218AQ96MZ4 157 aa10.65□□□□□ -0.7
PDLIM4-206ENST00000474421 Q96NJ1 140 aa10.65□□□□□ -0.7
PDLIM4-206ENST00000474421 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
PDLIM4-206ENST00000474421 A6NJY4 79 aa10.64□□□□□ -0.71
PDLIM4-206ENST00000474421 C2orf91Q6ZV80 131 aa10.63□□□□□ -0.71
PDLIM4-206ENST00000474421 CEND1Q8N111 149 aa10.63□□□□□ -0.71
PDLIM4-206ENST00000474421 PRO1854Q9UHT4 67 aa10.63□□□□□ -0.71
PDLIM4-206ENST00000474421 H3BMG7 143 aa10.62□□□□□ -0.71
PDLIM4-206ENST00000474421 LOC105371267A0A1B0GV96 52 aa10.61□□□□□ -0.71
PDLIM4-206ENST00000474421 A0A087WSZ3 146 aa10.6□□□□□ -0.71
PDLIM4-206ENST00000474421 FABP2P12104 132 aa10.6□□□□□ -0.71
PDLIM4-206ENST00000474421 C20orf166-AS1Q96NR2 134 aa10.58□□□□□ -0.72
PDLIM4-206ENST00000474421 A8MUU9 505 aa10.55□□□□□ -0.72
PDLIM4-206ENST00000474421 PYY3Q5JQD4 70 aa10.55□□□□□ -0.72
PDLIM4-206ENST00000474421 H3BQ85 93 aa10.53□□□□□ -0.72
PDLIM4-206ENST00000474421 TRIAP1O43715 76 aa10.53□□□□□ -0.72
PDLIM4-206ENST00000474421 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
PDLIM4-206ENST00000474421 FXYD2P54710 66 aa10.53□□□□□ -0.72
PDLIM4-206ENST00000474421 DNAL4O96015 105 aa10.52□□□□□ -0.73
PDLIM4-206ENST00000474421 A0A1W2PNM2 257 aa10.5□□□□□ -0.73
PDLIM4-206ENST00000474421 ANKRD29Q8N6D5 301 aa10.49□□□□□ -0.73
PDLIM4-206ENST00000474421 SIGMAR1Q99720 223 aa10.49□□□□□ -0.73
PDLIM4-206ENST00000474421 ORMDL1Q9P0S3 153 aa10.49□□□□□ -0.73
PDLIM4-206ENST00000474421 TRBV20-1A0A075B6N2 111 aa10.48□□□□□ -0.73
PDLIM4-206ENST00000474421 TRBV7-4A0A0J9YYF1 115 aa10.48□□□□□ -0.73
PDLIM4-206ENST00000474421 COX6CP09669 75 aa10.46□□□□□ -0.73
PDLIM4-206ENST00000474421 PSMB2P49721 201 aa10.46□□□□□ -0.73
PDLIM4-206ENST00000474421 DSCR10P59022 87 aa10.46□□□□□ -0.73
PDLIM4-206ENST00000474421 HSD52Q0P140 79 aa10.46□□□□□ -0.73
PDLIM4-206ENST00000474421 TMEM256-PLSCR3K7ERE1 68 aa10.45□□□□□ -0.74
PDLIM4-206ENST00000474421 LINC00313P59037 77 aa10.44□□□□□ -0.74
PDLIM4-206ENST00000474421 IGKV4-1P06312 121 aa10.43□□□□□ -0.74
PDLIM4-206ENST00000474421 A0A1B0GV72 72 aa10.39□□□□□ -0.75
PDLIM4-206ENST00000474421 K7ERJ3 54 aa10.39□□□□□ -0.75
PDLIM4-206ENST00000474421 CCKP06307 115 aa10.38□□□□□ -0.75
PDLIM4-206ENST00000474421 TRACP01848 142 aa10.37□□□□□ -0.75
PDLIM4-206ENST00000474421 UBE2V1Q13404 147 aa10.37□□□□□ -0.75
PDLIM4-206ENST00000474421 LINC00472Q9H8W2 130 aa10.35□□□□□ -0.75
PDLIM4-206ENST00000474421 KRTAP16-1A8MUX0 517 aa10.34□□□□□ -0.75
PDLIM4-206ENST00000474421 UQCR10Q9UDW1 63 aa10.33□□□□□ -0.76
PDLIM4-206ENST00000474421 TSTD3H0UI37 97 aa10.32□□□□□ -0.76
PDLIM4-206ENST00000474421 DEFB116Q30KQ4 102 aa10.31□□□□□ -0.76
PDLIM4-206ENST00000474421 IGHV6-1A0A0B4J1U7 121 aa10.3□□□□□ -0.76
PDLIM4-206ENST00000474421 FAM236DA0A1B0GTK5 79 aa10.29□□□□□ -0.76
PDLIM4-206ENST00000474421 SCGB1C2P0DMR2 95 aa10.29□□□□□ -0.76
PDLIM4-206ENST00000474421 FAM236CP0DP71 79 aa10.29□□□□□ -0.76
PDLIM4-206ENST00000474421 NOTCH2NLQ7Z3S9 236 aa10.29□□□□□ -0.76
PDLIM4-206ENST00000474421 RBM3P98179 157 aaKnown RBP10.28□□□□□ -0.76
PDLIM4-206ENST00000474421 DSCR8Q96T75 97 aa10.27□□□□□ -0.77
PDLIM4-206ENST00000474421 VPS25Q9BRG1 176 aa10.27□□□□□ -0.77
PDLIM4-206ENST00000474421 RBM12B-AS1Q9P1G2 102 aa10.27□□□□□ -0.77
PDLIM4-206ENST00000474421 C8orf87E5RJ46 101 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms