RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 DCHS1Q96JQ0 3298 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 PIEZO2Q9H5I5 2752 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 A0A087WVE0 104 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 A0A096LPF7 62 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 TRAV22A0A0B4J277 110 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 A6NN06 94 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 PSCAO43653 123 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 HAMPP81172 84 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 SPAG11BQ08648 103 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 NREPQ16612 68 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 KRTAP26-1Q6PEX3 210 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 UNQ6190/PRO20217Q6UXQ8 127 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 Q6ZQY7 126 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 HIGD2AQ9BW72 106 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 KCNQ1DNQ9H478 68 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 LINC00474Q9P2X8 69 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 MAP1BP46821 2468 aaKnown RBP1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 BOD1L1Q8NFC6 3051 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 TPRP12270 2363 aaKnown RBP1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 ACACAQ13085 2346 aa1.49□□□□□ -2.17
TMEM50B-208ENST00000474272 CSMD1Q96PZ7 3565 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 TACC2O95359 2948 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 PCNX1Q96RV3 2341 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 PTPRQQ9UMZ3 2332 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 AKAP13Q12802 2813 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 ATMQ13315 3056 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 TRAV10A0A0B4J240 114 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 LCE6AA0A183 80 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 SPRR1AP35321 89 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 SPRR4Q96PI1 79 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 PRR15LQ9BU68 103 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 CYSTM1Q9H1C7 97 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 C6orf48Q9UBA6 75 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 SNURFQ9Y675 71 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 CR1P17927 2039 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 COL6A6A6NMZ7 2263 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 RP1L1Q8IWN7 2480 aaPredicted RBP1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 ANKRD11Q6UB99 2663 aaPredicted RBP1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 SVEP1Q4LDE5 3571 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 FBN3Q75N90 2809 aa1.48□□□□□ -2.17
TMEM50B-208ENST00000474272 DOPEY2Q9Y3R5 2298 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 LRBAP50851 2863 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 DMXL1Q9Y485 3027 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 LOC101927531A0A1B0GV80 90 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 LINC01556Q5JQF7 62 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 Q8NDZ9 215 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 Q9BRP9 147 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 WFDC10AQ9H1F0 79 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 DCHS2Q6V1P9 2916 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 RELNP78509 3460 aa1.47□□□□□ -2.17
TMEM50B-208ENST00000474272 TLN1Q9Y490 2541 aaKnown RBP1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 RIF1Q5UIP0 2472 aaKnown RBP1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 GVINP1Q7Z2Y8 2422 aa1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 CEP250Q9BV73 2442 aa1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 MED13LQ71F56 2210 aa1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 H3BPC8 53 aa1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 M0R2N4 97 aa1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 LINC00208Q96KT6 92 aa1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 C20orf166-AS1Q96NR2 134 aa1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 HRNRQ86YZ3 2850 aaPredicted RBP1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 PTPRZ1P23471 2315 aaPredicted RBP1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 ANK3Q12955 4377 aaKnown RBP1.46□□□□□ -2.18
TMEM50B-208ENST00000474272 ETDCA0A1B0GVM5 59 aa1.45□□□□□ -2.18
TMEM50B-208ENST00000474272 DEFB135Q30KP9 77 aa1.45□□□□□ -2.18
TMEM50B-208ENST00000474272 FAM229BQ4G0N7 80 aa1.45□□□□□ -2.18
TMEM50B-208ENST00000474272 Q5VV11 94 aa1.45□□□□□ -2.18
TMEM50B-208ENST00000474272 SPAG11AQ6PDA7 123 aa1.45□□□□□ -2.18
TMEM50B-208ENST00000474272 CLPSL2Q6UWE3 100 aa1.45□□□□□ -2.18
TMEM50B-208ENST00000474272 Q6ZRX8 168 aa1.45□□□□□ -2.18
TMEM50B-208ENST00000474272 TTC28Q96AY4 2481 aa1.45□□□□□ -2.18
TMEM50B-208ENST00000474272 CELSR1Q9NYQ6 3014 aa1.45□□□□□ -2.18
TMEM50B-208ENST00000474272 J3QKU1 62 aa1.44□□□□□ -2.18
TMEM50B-208ENST00000474272 PRB1P04280 392 aa1.44□□□□□ -2.18
TMEM50B-208ENST00000474272 SPRR1BP22528 89 aa1.44□□□□□ -2.18
TMEM50B-208ENST00000474272 RPL37AP61513 92 aaKnown RBP1.44□□□□□ -2.18
TMEM50B-208ENST00000474272 C1orf137Q5JT78 98 aa1.44□□□□□ -2.18
TMEM50B-208ENST00000474272 ZFHX3Q15911 3703 aa1.44□□□□□ -2.18
TMEM50B-208ENST00000474272 ASH1LQ9NR48 2969 aaKnown RBP1.44□□□□□ -2.18
TMEM50B-208ENST00000474272 ABCA2Q9BZC7 2435 aa1.44□□□□□ -2.18
TMEM50B-208ENST00000474272 SPTAN1Q13813 2472 aaKnown RBP1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 DOPEY1Q5JWR5 2465 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.43□□□□□ -2.185e-6■■■■□ 22.8
TMEM50B-208ENST00000474272 SPTA1P02549 2419 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 HIVEP3Q5T1R4 2406 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 DEFB131BA0A096LNP1 70 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 H0Y9P7 68 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 DEFB4AO15263 64 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 C1orf134Q5TEV5 83 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 WFDC10BQ8IUB3 73 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 DMAC1Q96GE9 116 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 SPTBN1Q01082 2364 aaKnown RBP1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 SORL1Q92673 2214 aa1.43□□□□□ -2.18
TMEM50B-208ENST00000474272 CREBBPQ92793 2442 aa1.42□□□□□ -2.18
TMEM50B-208ENST00000474272 SPTBN2O15020 2390 aa1.42□□□□□ -2.18
TMEM50B-208ENST00000474272 HTN3P15516 51 aa1.42□□□□□ -2.18
TMEM50B-208ENST00000474272 ROMO1P60602 79 aa1.42□□□□□ -2.18
TMEM50B-208ENST00000474272 CNBPP62633 177 aaKnown RBP1.42□□□□□ -2.18
TMEM50B-208ENST00000474272 DEFB105AQ8NG35 78 aa1.42□□□□□ -2.18
TMEM50B-208ENST00000474272 TP53AIP1Q9HCN2 124 aa1.42□□□□□ -2.18
TMEM50B-208ENST00000474272 COL12A1Q99715 3063 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms