RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
ATPAF1-204ENST00000474020 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
ATPAF1-204ENST00000474020 A0A087WVE0 104 aa3.77□□□□□ -1.81
ATPAF1-204ENST00000474020 CRYGAP11844 174 aa3.77□□□□□ -1.81
ATPAF1-204ENST00000474020 SPRR1AP35321 89 aa3.77□□□□□ -1.81
ATPAF1-204ENST00000474020 APLNQ9ULZ1 77 aa3.77□□□□□ -1.81
ATPAF1-204ENST00000474020 IGKV2-24A0A0C4DH68 120 aa3.76□□□□□ -1.81
ATPAF1-204ENST00000474020 BPY2O14599 106 aa3.76□□□□□ -1.81
ATPAF1-204ENST00000474020 CASC10Q5T4H9 136 aa3.76□□□□□ -1.81
ATPAF1-204ENST00000474020 FAM19A1Q7Z5A9 133 aa3.76□□□□□ -1.81
ATPAF1-204ENST00000474020 IGLV5-48A0A075B6I7 105 aa3.75□□□□□ -1.81
ATPAF1-204ENST00000474020 TRAV7A0A075B6U4 112 aa3.75□□□□□ -1.81
ATPAF1-204ENST00000474020 FAM168BA1KXE4 195 aa3.75□□□□□ -1.81
ATPAF1-204ENST00000474020 TMEM258P61165 79 aa3.75□□□□□ -1.81
ATPAF1-204ENST00000474020 C1orf137Q5JT78 98 aa3.75□□□□□ -1.81
ATPAF1-204ENST00000474020 VWFP04275 2813 aa3.74□□□□□ -1.81
ATPAF1-204ENST00000474020 NBDYA0A0U1RRE5 68 aa3.74□□□□□ -1.81
ATPAF1-204ENST00000474020 UBE2AP49459 152 aa3.74□□□□□ -1.81
ATPAF1-204ENST00000474020 Q8N377 158 aa3.74□□□□□ -1.81
ATPAF1-204ENST00000474020 DPH3Q96FX2 82 aa3.74□□□□□ -1.81
ATPAF1-204ENST00000474020 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.73□□□□□ -1.81
ATPAF1-204ENST00000474020 A0A096LNI7 61 aa3.73□□□□□ -1.81
ATPAF1-204ENST00000474020 KRTAP4-16G5E9R7 235 aaPredicted RBP3.73□□□□□ -1.81
ATPAF1-204ENST00000474020 C3orf84H3BNL1 204 aa3.73□□□□□ -1.81
ATPAF1-204ENST00000474020 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
ATPAF1-204ENST00000474020 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
ATPAF1-204ENST00000474020 Q8NBF4 154 aa3.73□□□□□ -1.81
ATPAF1-204ENST00000474020 Q9BRP9 147 aa3.73□□□□□ -1.81
ATPAF1-204ENST00000474020 H0Y9J4 135 aa3.72□□□□□ -1.81
ATPAF1-204ENST00000474020 J3KT08 172 aa3.72□□□□□ -1.81
ATPAF1-204ENST00000474020 NDUFC1O43677 76 aa3.72□□□□□ -1.81
ATPAF1-204ENST00000474020 SCXQ7RTU7 201 aa3.72□□□□□ -1.81
ATPAF1-204ENST00000474020 HIGD2AQ9BW72 106 aa3.72□□□□□ -1.81
ATPAF1-204ENST00000474020 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
ATPAF1-204ENST00000474020 CMYA5Q8N3K9 4069 aa3.71□□□□□ -1.81
ATPAF1-204ENST00000474020 M0R2N4 97 aa3.71□□□□□ -1.82
ATPAF1-204ENST00000474020 C9orf163Q8N9P6 203 aa3.71□□□□□ -1.82
ATPAF1-204ENST00000474020 ST20-AS1Q8NBB2 130 aa3.71□□□□□ -1.82
ATPAF1-204ENST00000474020 ERC2-IT1O76042 136 aa3.7□□□□□ -1.82
ATPAF1-204ENST00000474020 C20orf197Q8N268 126 aa3.7□□□□□ -1.82
ATPAF1-204ENST00000474020 SPRR4Q96PI1 79 aa3.7□□□□□ -1.82
ATPAF1-204ENST00000474020 ZNF706Q9Y5V0 76 aaPredicted RBP3.7□□□□□ -1.82
ATPAF1-204ENST00000474020 PRKDCP78527 4128 aaKnown RBP3.69□□□□□ -1.82
ATPAF1-204ENST00000474020 IGLV8-61A0A075B6I0 122 aa3.69□□□□□ -1.82
ATPAF1-204ENST00000474020 ATP5EP56381 51 aaPredicted RBP3.69□□□□□ -1.82
ATPAF1-204ENST00000474020 PRLHP81277 87 aa3.69□□□□□ -1.82
ATPAF1-204ENST00000474020 KRTAP7-1Q8IUC3 87 aa3.69□□□□□ -1.82
ATPAF1-204ENST00000474020 TRRAPQ9Y4A5 3859 aa3.69□□□□□ -1.82
ATPAF1-204ENST00000474020 FAM236DA0A1B0GTK5 79 aa3.68□□□□□ -1.82
ATPAF1-204ENST00000474020 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
ATPAF1-204ENST00000474020 A0A1W2PNN7 141 aa3.68□□□□□ -1.82
ATPAF1-204ENST00000474020 LRCOL1A6NCL2 159 aa3.68□□□□□ -1.82
ATPAF1-204ENST00000474020 EPM2AB3EWF7 344 aa3.68□□□□□ -1.82
ATPAF1-204ENST00000474020 IGKV4-1P06312 121 aa3.68□□□□□ -1.82
ATPAF1-204ENST00000474020 FAM236CP0DP71 79 aa3.68□□□□□ -1.82
ATPAF1-204ENST00000474020 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
ATPAF1-204ENST00000474020 PHF5AQ7RTV0 110 aaKnown RBP3.68□□□□□ -1.82
ATPAF1-204ENST00000474020 EPPK1P58107 5090 aaKnown RBP3.67□□□□□ -1.82
ATPAF1-204ENST00000474020 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
ATPAF1-204ENST00000474020 SPRR1BP22528 89 aa3.67□□□□□ -1.82
ATPAF1-204ENST00000474020 KLKP1Q107X0 134 aa3.67□□□□□ -1.82
ATPAF1-204ENST00000474020 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
ATPAF1-204ENST00000474020 PCLOQ9Y6V0 5065 aa3.66□□□□□ -1.82
ATPAF1-204ENST00000474020 CHTF8P0CG12 524 aa3.66□□□□□ -1.82
ATPAF1-204ENST00000474020 RPL37AP61513 92 aaKnown RBP3.66□□□□□ -1.82
ATPAF1-204ENST00000474020 IGFL1Q6UW32 110 aa3.66□□□□□ -1.82
ATPAF1-204ENST00000474020 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
ATPAF1-204ENST00000474020 TENM3Q9P273 2699 aa3.66□□□□□ -1.82
ATPAF1-204ENST00000474020 A0A087WTM6 91 aa3.65□□□□□ -1.83
ATPAF1-204ENST00000474020 HCG22E2RYF7 251 aa3.65□□□□□ -1.83
ATPAF1-204ENST00000474020 C1orf134Q5TEV5 83 aa3.65□□□□□ -1.83
ATPAF1-204ENST00000474020 Q6ZRN7 208 aaPredicted RBP3.65□□□□□ -1.83
ATPAF1-204ENST00000474020 SMIM29Q86T20 159 aa3.65□□□□□ -1.83
ATPAF1-204ENST00000474020 Q8N9L7 120 aa3.65□□□□□ -1.83
ATPAF1-204ENST00000474020 TMEM254Q8TBM7 123 aa3.65□□□□□ -1.83
ATPAF1-204ENST00000474020 SPACA4Q8TDM5 124 aa3.65□□□□□ -1.83
ATPAF1-204ENST00000474020 A0A087WSZ3 146 aa3.64□□□□□ -1.83
ATPAF1-204ENST00000474020 IGLV5-52A0A0A0MRZ9 124 aa3.64□□□□□ -1.83
ATPAF1-204ENST00000474020 RTL8CO15255 209 aa3.64□□□□□ -1.83
ATPAF1-204ENST00000474020 NDUFB1O75438 58 aa3.64□□□□□ -1.83
ATPAF1-204ENST00000474020 C5orf47Q569G3 176 aa3.63□□□□□ -1.83
ATPAF1-204ENST00000474020 SNURFQ9Y675 71 aa3.63□□□□□ -1.83
ATPAF1-204ENST00000474020 SERP1Q9Y6X1 66 aa3.63□□□□□ -1.83
ATPAF1-204ENST00000474020 HYDINQ4G0P3 5121 aa3.63□□□□□ -1.83
ATPAF1-204ENST00000474020 K7EQZ3 153 aa3.62□□□□□ -1.83
ATPAF1-204ENST00000474020 CDK2AP2O75956 126 aa3.62□□□□□ -1.83
ATPAF1-204ENST00000474020 MP68P56378 58 aa3.62□□□□□ -1.83
ATPAF1-204ENST00000474020 OCR1Q9BZK8 76 aa3.62□□□□□ -1.83
ATPAF1-204ENST00000474020 A8MWP4 228 aa3.61□□□□□ -1.83
ATPAF1-204ENST00000474020 H7BZZ5 65 aa3.61□□□□□ -1.83
ATPAF1-204ENST00000474020 LY6G6CO95867 125 aa3.61□□□□□ -1.83
ATPAF1-204ENST00000474020 DSCR10P59022 87 aa3.61□□□□□ -1.83
ATPAF1-204ENST00000474020 Q6ZR54 194 aa3.61□□□□□ -1.83
ATPAF1-204ENST00000474020 DNAH3Q8TD57 4116 aa3.6□□□□□ -1.83
ATPAF1-204ENST00000474020 IGLV9-49A0A0B4J1Y8 123 aa3.6□□□□□ -1.83
ATPAF1-204ENST00000474020 A0A0U1RQV1 116 aa3.6□□□□□ -1.83
ATPAF1-204ENST00000474020 CASC2Q6XLA1 102 aa3.6□□□□□ -1.83
ATPAF1-204ENST00000474020 CYSTM1Q9H1C7 97 aa3.6□□□□□ -1.83
ATPAF1-204ENST00000474020 PLAC8Q9NZF1 115 aa3.6□□□□□ -1.83
ATPAF1-204ENST00000474020 RYR1P21817 5038 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms