RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 HSBP1L1C9JCN9 74 aa6.39□□□□□ -1.39
SMPD4-217ENST00000473720 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
SMPD4-217ENST00000473720 SNRPEP62304 92 aaKnown RBP6.39□□□□□ -1.39
SMPD4-217ENST00000473720 LINC00575Q6W349 94 aa6.39□□□□□ -1.39
SMPD4-217ENST00000473720 C12orf57Q99622 126 aa6.39□□□□□ -1.39
SMPD4-217ENST00000473720 A6NJY4 79 aa6.37□□□□□ -1.39
SMPD4-217ENST00000473720 M0R2T5 61 aa6.37□□□□□ -1.39
SMPD4-217ENST00000473720 COX6B2Q6YFQ2 88 aa6.37□□□□□ -1.39
SMPD4-217ENST00000473720 HIST3H2BBQ8N257 126 aa6.37□□□□□ -1.39
SMPD4-217ENST00000473720 IGFL1Q6UW32 110 aa6.36□□□□□ -1.39
SMPD4-217ENST00000473720 HIST1H2BLQ99880 126 aa6.36□□□□□ -1.39
SMPD4-217ENST00000473720 CFC1BP0CG36 223 aa6.35□□□□□ -1.39
SMPD4-217ENST00000473720 TRBV7-7A0A0K0K1E9 115 aa6.34□□□□□ -1.39
SMPD4-217ENST00000473720 Q6JHZ5 121 aa6.34□□□□□ -1.39
SMPD4-217ENST00000473720 CLEC2BQ92478 149 aa6.34□□□□□ -1.39
SMPD4-217ENST00000473720 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
SMPD4-217ENST00000473720 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.39
SMPD4-217ENST00000473720 S100A6P06703 90 aa6.33□□□□□ -1.4
SMPD4-217ENST00000473720 OCIAD2Q56VL3 154 aa6.33□□□□□ -1.4
SMPD4-217ENST00000473720 H3BUT2 72 aa6.32□□□□□ -1.4
SMPD4-217ENST00000473720 SCGB1D1O95968 90 aa6.32□□□□□ -1.4
SMPD4-217ENST00000473720 OBSCN-AS1Q96MR7 158 aa6.32□□□□□ -1.4
SMPD4-217ENST00000473720 SNHG12Q9BXW3 62 aa6.32□□□□□ -1.4
SMPD4-217ENST00000473720 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
SMPD4-217ENST00000473720 BVES-AS1Q5T3Y7 98 aa6.31□□□□□ -1.4
SMPD4-217ENST00000473720 Q6Q795 121 aa6.31□□□□□ -1.4
SMPD4-217ENST00000473720 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.31□□□□□ -1.4
SMPD4-217ENST00000473720 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
SMPD4-217ENST00000473720 LST1O00453 97 aa6.28□□□□□ -1.4
SMPD4-217ENST00000473720 ATP11AUNQ6ZP68 121 aa6.28□□□□□ -1.4
SMPD4-217ENST00000473720 COX8AP10176 69 aa6.27□□□□□ -1.41
SMPD4-217ENST00000473720 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
SMPD4-217ENST00000473720 PPDPFLQ8WWR9 84 aa6.26□□□□□ -1.41
SMPD4-217ENST00000473720 C14orf144Q96I85 54 aa6.26□□□□□ -1.41
SMPD4-217ENST00000473720 Q96NJ1 140 aa6.26□□□□□ -1.41
SMPD4-217ENST00000473720 CFC1P0CG37 223 aa6.25□□□□□ -1.41
SMPD4-217ENST00000473720 Q75L30 129 aa6.24□□□□□ -1.41
SMPD4-217ENST00000473720 SNCGO76070 127 aa6.23□□□□□ -1.41
SMPD4-217ENST00000473720 PAM16Q9Y3D7 125 aa6.23□□□□□ -1.41
SMPD4-217ENST00000473720 FSIP2Q5CZC0 6907 aa6.23□□□□□ -1.41
SMPD4-217ENST00000473720 NDUFV3P56181 108 aaKnown RBP6.22□□□□□ -1.41
SMPD4-217ENST00000473720 FAM218AQ96MZ4 157 aa6.22□□□□□ -1.41
SMPD4-217ENST00000473720 SS18L2Q9UHA2 77 aa6.22□□□□□ -1.41
SMPD4-217ENST00000473720 FLGP20930 4061 aaPredicted RBP6.21□□□□□ -1.42
SMPD4-217ENST00000473720 S100A1P23297 94 aa6.21□□□□□ -1.42
SMPD4-217ENST00000473720 SPATA45Q537H7 98 aa6.21□□□□□ -1.42
SMPD4-217ENST00000473720 A0A087WSZ3 146 aa6.2□□□□□ -1.42
SMPD4-217ENST00000473720 H0YGX0 51 aa6.2□□□□□ -1.42
SMPD4-217ENST00000473720 DLEU1O43261 78 aa6.2□□□□□ -1.42
SMPD4-217ENST00000473720 FABP2P12104 132 aa6.2□□□□□ -1.42
SMPD4-217ENST00000473720 TEN1Q86WV5 123 aa6.2□□□□□ -1.42
SMPD4-217ENST00000473720 A0A0B4J2C4 111 aa6.19□□□□□ -1.42
SMPD4-217ENST00000473720 H3BMG7 143 aa6.19□□□□□ -1.42
SMPD4-217ENST00000473720 A0A1B0GV72 72 aa6.18□□□□□ -1.42
SMPD4-217ENST00000473720 DSCR10P59022 87 aa6.17□□□□□ -1.42
SMPD4-217ENST00000473720 VAMP8Q9BV40 100 aa6.17□□□□□ -1.42
SMPD4-217ENST00000473720 HIGD1BQ9P298 99 aa6.17□□□□□ -1.42
SMPD4-217ENST00000473720 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
SMPD4-217ENST00000473720 CEND1Q8N111 149 aa6.16□□□□□ -1.42
SMPD4-217ENST00000473720 SIGMAR1Q99720 223 aa6.16□□□□□ -1.42
SMPD4-217ENST00000473720 C20orf166-AS1Q96NR2 134 aa6.15□□□□□ -1.42
SMPD4-217ENST00000473720 PRO1854Q9UHT4 67 aa6.15□□□□□ -1.42
SMPD4-217ENST00000473720 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
SMPD4-217ENST00000473720 TMEM238LA0A1B0GVL6 79 aa6.14□□□□□ -1.43
SMPD4-217ENST00000473720 A8MUU9 505 aa6.13□□□□□ -1.43
SMPD4-217ENST00000473720 TRIAP1O43715 76 aa6.13□□□□□ -1.43
SMPD4-217ENST00000473720 FXYD2P54710 66 aa6.13□□□□□ -1.43
SMPD4-217ENST00000473720 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
SMPD4-217ENST00000473720 GHRHP01286 108 aa6.12□□□□□ -1.43
SMPD4-217ENST00000473720 A0A1B0GX51 115 aa6.11□□□□□ -1.43
SMPD4-217ENST00000473720 DNAL4O96015 105 aa6.11□□□□□ -1.43
SMPD4-217ENST00000473720 IGKV4-1P06312 121 aa6.11□□□□□ -1.43
SMPD4-217ENST00000473720 PSMB2P49721 201 aa6.11□□□□□ -1.43
SMPD4-217ENST00000473720 LINC00313P59037 77 aa6.1□□□□□ -1.43
SMPD4-217ENST00000473720 DEFB116Q30KQ4 102 aa6.1□□□□□ -1.43
SMPD4-217ENST00000473720 ANKRD29Q8N6D5 301 aa6.1□□□□□ -1.43
SMPD4-217ENST00000473720 ORMDL1Q9P0S3 153 aa6.09□□□□□ -1.43
SMPD4-217ENST00000473720 FAM236DA0A1B0GTK5 79 aa6.08□□□□□ -1.44
SMPD4-217ENST00000473720 K7ERJ3 54 aa6.08□□□□□ -1.44
SMPD4-217ENST00000473720 FAM236CP0DP71 79 aa6.08□□□□□ -1.44
SMPD4-217ENST00000473720 TRBV7-4A0A0J9YYF1 115 aa6.05□□□□□ -1.44
SMPD4-217ENST00000473720 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
SMPD4-217ENST00000473720 TRACP01848 142 aa6.05□□□□□ -1.44
SMPD4-217ENST00000473720 NOTCH2NLQ7Z3S9 236 aa6.05□□□□□ -1.44
SMPD4-217ENST00000473720 VPS25Q9BRG1 176 aa6.05□□□□□ -1.44
SMPD4-217ENST00000473720 IGHV6-1A0A0B4J1U7 121 aa6.04□□□□□ -1.44
SMPD4-217ENST00000473720 TMEM256-PLSCR3K7ERE1 68 aa6.04□□□□□ -1.44
SMPD4-217ENST00000473720 CCKP06307 115 aa6.04□□□□□ -1.44
SMPD4-217ENST00000473720 COX6CP09669 75 aa6.04□□□□□ -1.44
SMPD4-217ENST00000473720 HSD52Q0P140 79 aa6.03□□□□□ -1.44
SMPD4-217ENST00000473720 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
SMPD4-217ENST00000473720 H3BQ85 93 aa6.02□□□□□ -1.45
SMPD4-217ENST00000473720 RBM12B-AS1Q9P1G2 102 aa6.01□□□□□ -1.45
SMPD4-217ENST00000473720 PYY3Q5JQD4 70 aa6□□□□□ -1.45
SMPD4-217ENST00000473720 LINC00472Q9H8W2 130 aa6□□□□□ -1.45
SMPD4-217ENST00000473720 SCGB1C2P0DMR2 95 aa5.99□□□□□ -1.45
SMPD4-217ENST00000473720 HRES1P13985 223 aa5.97□□□□□ -1.45
SMPD4-217ENST00000473720 UBE2V1Q13404 147 aa5.97□□□□□ -1.45
SMPD4-217ENST00000473720 RBM3P98179 157 aaKnown RBP5.96□□□□□ -1.46
SMPD4-217ENST00000473720 DSCR8Q96T75 97 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms