RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 BVES-AS1Q5T3Y7 98 aa7.39□□□□□ -1.23
SHROOM3-204ENST00000473602 FP248Q71RG6 208 aaPredicted RBP7.39□□□□□ -1.23
SHROOM3-204ENST00000473602 A4D1N5 150 aa7.38□□□□□ -1.23
SHROOM3-204ENST00000473602 VAMP3Q15836 100 aa7.38□□□□□ -1.23
SHROOM3-204ENST00000473602 C9orf153Q5TBE3 101 aa7.38□□□□□ -1.23
SHROOM3-204ENST00000473602 LAMTOR3Q9UHA4 124 aa7.36□□□□□ -1.23
SHROOM3-204ENST00000473602 SMIM11BQ8TCY0 68 aa7.35□□□□□ -1.23
SHROOM3-204ENST00000473602 NHP2Q9NX24 153 aaKnown RBP7.35□□□□□ -1.23
SHROOM3-204ENST00000473602 TEX49A0A1B0GTD5 131 aa7.34□□□□□ -1.23
SHROOM3-204ENST00000473602 TMEM238LA0A1B0GVL6 79 aa7.34□□□□□ -1.23
SHROOM3-204ENST00000473602 K7ERU9 68 aa7.34□□□□□ -1.23
SHROOM3-204ENST00000473602 CDIP1Q9H305 208 aa7.34□□□□□ -1.23
SHROOM3-204ENST00000473602 C9orf118A6NHY6 69 aa7.33□□□□□ -1.24
SHROOM3-204ENST00000473602 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
SHROOM3-204ENST00000473602 SLC25A20O43772 301 aa7.33□□□□□ -1.24
SHROOM3-204ENST00000473602 Q8N377 158 aa7.33□□□□□ -1.24
SHROOM3-204ENST00000473602 IGLV5-48A0A075B6I7 105 aa7.32□□□□□ -1.24
SHROOM3-204ENST00000473602 TAX1BP3O14907 124 aa7.32□□□□□ -1.24
SHROOM3-204ENST00000473602 LYRM7Q5U5X0 104 aa7.32□□□□□ -1.24
SHROOM3-204ENST00000473602 HIST1H4GQ99525 98 aa7.32□□□□□ -1.24
SHROOM3-204ENST00000473602 FABP2P12104 132 aa7.31□□□□□ -1.24
SHROOM3-204ENST00000473602 DEFB105AQ8NG35 78 aa7.31□□□□□ -1.24
SHROOM3-204ENST00000473602 C2orf91Q6ZV80 131 aa7.3□□□□□ -1.24
SHROOM3-204ENST00000473602 J3QR89 54 aa7.29□□□□□ -1.24
SHROOM3-204ENST00000473602 Q1RN00 199 aa7.29□□□□□ -1.24
SHROOM3-204ENST00000473602 LIMD2Q9BT23 127 aa7.29□□□□□ -1.24
SHROOM3-204ENST00000473602 LINC01547P58512 204 aaPredicted RBP7.28□□□□□ -1.24
SHROOM3-204ENST00000473602 CD164Q04900 197 aa7.28□□□□□ -1.24
SHROOM3-204ENST00000473602 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
SHROOM3-204ENST00000473602 LINC00575Q6W349 94 aa7.27□□□□□ -1.25
SHROOM3-204ENST00000473602 SMIM29Q86T20 159 aa7.27□□□□□ -1.25
SHROOM3-204ENST00000473602 CEND1Q8N111 149 aa7.27□□□□□ -1.25
SHROOM3-204ENST00000473602 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
SHROOM3-204ENST00000473602 GHRHP01286 108 aa7.26□□□□□ -1.25
SHROOM3-204ENST00000473602 A0A1W2PPM0 123 aa7.25□□□□□ -1.25
SHROOM3-204ENST00000473602 F8W1H4 67 aa7.25□□□□□ -1.25
SHROOM3-204ENST00000473602 K7EP34 96 aa7.25□□□□□ -1.25
SHROOM3-204ENST00000473602 hADV29S1A0JD25 119 aa7.24□□□□□ -1.25
SHROOM3-204ENST00000473602 H7C2G1 150 aa7.23□□□□□ -1.25
SHROOM3-204ENST00000473602 HRCT1Q6UXD1 115 aa7.23□□□□□ -1.25
SHROOM3-204ENST00000473602 A0A0B4J2C4 111 aa7.22□□□□□ -1.25
SHROOM3-204ENST00000473602 F8WEM9 126 aa7.22□□□□□ -1.25
SHROOM3-204ENST00000473602 CFC1BP0CG36 223 aa7.22□□□□□ -1.25
SHROOM3-204ENST00000473602 CFC1P0CG37 223 aa7.22□□□□□ -1.25
SHROOM3-204ENST00000473602 Q5XG85 94 aa7.22□□□□□ -1.25
SHROOM3-204ENST00000473602 Q6ZQY7 126 aa7.22□□□□□ -1.25
SHROOM3-204ENST00000473602 RAB37Q96AX2 223 aa7.22□□□□□ -1.25
SHROOM3-204ENST00000473602 SPCS1Q9Y6A9 102 aa7.22□□□□□ -1.25
SHROOM3-204ENST00000473602 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.26
SHROOM3-204ENST00000473602 H3BUT2 72 aa7.21□□□□□ -1.26
SHROOM3-204ENST00000473602 OCIAD2Q56VL3 154 aa7.21□□□□□ -1.26
SHROOM3-204ENST00000473602 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.21□□□□□ -1.26
SHROOM3-204ENST00000473602 PPDPFLQ8WWR9 84 aa7.21□□□□□ -1.26
SHROOM3-204ENST00000473602 SNCGO76070 127 aa7.18□□□□□ -1.26
SHROOM3-204ENST00000473602 IGLV8-61A0A075B6I0 122 aa7.17□□□□□ -1.26
SHROOM3-204ENST00000473602 H0YGX0 51 aa7.17□□□□□ -1.26
SHROOM3-204ENST00000473602 ASB16-AS1Q495Z4 193 aa7.17□□□□□ -1.26
SHROOM3-204ENST00000473602 Q6JHZ5 121 aa7.17□□□□□ -1.26
SHROOM3-204ENST00000473602 VPS25Q9BRG1 176 aa7.17□□□□□ -1.26
SHROOM3-204ENST00000473602 SEC61BP60468 96 aaKnown RBP7.16□□□□□ -1.26
SHROOM3-204ENST00000473602 FXYD2P54710 66 aa7.15□□□□□ -1.26
SHROOM3-204ENST00000473602 CLEC2BQ92478 149 aa7.15□□□□□ -1.26
SHROOM3-204ENST00000473602 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.26
SHROOM3-204ENST00000473602 PRO1854Q9UHT4 67 aa7.15□□□□□ -1.26
SHROOM3-204ENST00000473602 A0A0G2JQZ4 141 aa7.14□□□□□ -1.27
SHROOM3-204ENST00000473602 TCL1BO95988 128 aa7.14□□□□□ -1.27
SHROOM3-204ENST00000473602 A0A1B0GX51 115 aa7.12□□□□□ -1.27
SHROOM3-204ENST00000473602 C1orf195Q5TG92 126 aa7.12□□□□□ -1.27
SHROOM3-204ENST00000473602 COX6CP09669 75 aa7.11□□□□□ -1.27
SHROOM3-204ENST00000473602 SCGB1A1P11684 91 aa7.11□□□□□ -1.27
SHROOM3-204ENST00000473602 IGFL1Q6UW32 110 aa7.11□□□□□ -1.27
SHROOM3-204ENST00000473602 PCP4P48539 62 aa7.1□□□□□ -1.27
SHROOM3-204ENST00000473602 FAM218AQ96MZ4 157 aa7.1□□□□□ -1.27
SHROOM3-204ENST00000473602 TRBV7-7A0A0K0K1E9 115 aa7.09□□□□□ -1.27
SHROOM3-204ENST00000473602 H3BMG7 143 aa7.09□□□□□ -1.27
SHROOM3-204ENST00000473602 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
SHROOM3-204ENST00000473602 TRIAP1O43715 76 aa7.07□□□□□ -1.28
SHROOM3-204ENST00000473602 SCGB1C2P0DMR2 95 aa7.07□□□□□ -1.28
SHROOM3-204ENST00000473602 MTURNQ8N3F0 131 aa7.07□□□□□ -1.28
SHROOM3-204ENST00000473602 NDUFV3P56181 108 aaKnown RBP7.06□□□□□ -1.28
SHROOM3-204ENST00000473602 KRTAP4-12Q9BQ66 201 aa7.06□□□□□ -1.28
SHROOM3-204ENST00000473602 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
SHROOM3-204ENST00000473602 ATXN8Q156A1 80 aa7.04□□□□□ -1.28
SHROOM3-204ENST00000473602 Q6Q795 121 aa7.04□□□□□ -1.28
SHROOM3-204ENST00000473602 SIGMAR1Q99720 223 aa7.04□□□□□ -1.28
SHROOM3-204ENST00000473602 H3BQ85 93 aa7.03□□□□□ -1.28
SHROOM3-204ENST00000473602 K7ERJ3 54 aa7.03□□□□□ -1.28
SHROOM3-204ENST00000473602 PSMB2P49721 201 aa7.03□□□□□ -1.28
SHROOM3-204ENST00000473602 SS18L2Q9UHA2 77 aa7.03□□□□□ -1.28
SHROOM3-204ENST00000473602 DNAL4O96015 105 aa7.02□□□□□ -1.29
SHROOM3-204ENST00000473602 TEN1Q86WV5 123 aa7.02□□□□□ -1.29
SHROOM3-204ENST00000473602 ORMDL1Q9P0S3 153 aa7□□□□□ -1.29
SHROOM3-204ENST00000473602 LST1O00453 97 aa6.99□□□□□ -1.29
SHROOM3-204ENST00000473602 NAA38Q9BRA0 125 aaKnown RBP6.99□□□□□ -1.29
SHROOM3-204ENST00000473602 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
SHROOM3-204ENST00000473602 ETDBQ3ZM63 59 aa6.98□□□□□ -1.29
SHROOM3-204ENST00000473602 PCOTHQ58A44 107 aa6.98□□□□□ -1.29
SHROOM3-204ENST00000473602 PRO0461Q9UI25 63 aa6.98□□□□□ -1.29
SHROOM3-204ENST00000473602 H3BT86 120 aa6.97□□□□□ -1.29
SHROOM3-204ENST00000473602 TMEM256-PLSCR3K7ERE1 68 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms