RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 DNAH9Q9NYC9 4486 aa-1.2□□□□□ -2.6
BBX-223ENST00000473542 C9orf92A6NGG3 77 aa-1.2□□□□□ -2.6
BBX-223ENST00000473542 EPPK1P58107 5090 aaKnown RBP-1.21□□□□□ -2.6
BBX-223ENST00000473542 DIP2BQ9P265 1576 aa-1.21□□□□□ -2.6
BBX-223ENST00000473542 KANTRA0A1W2PQU2 76 aa-1.21□□□□□ -2.6
BBX-223ENST00000473542 LINC00158P58513 81 aa-1.21□□□□□ -2.6
BBX-223ENST00000473542 SPG11Q96JI7 2443 aa-1.21□□□□□ -2.6
BBX-223ENST00000473542 DEPDC5O75140 1603 aa-1.22□□□□□ -2.6
BBX-223ENST00000473542 UACAQ9BZF9 1416 aa-1.22□□□□□ -2.6
BBX-223ENST00000473542 EPG5Q9HCE0 2579 aa-1.22□□□□□ -2.6
BBX-223ENST00000473542 ZZEF1O43149 2961 aa-1.22□□□□□ -2.6
BBX-223ENST00000473542 AKAP9Q99996 3911 aa-1.23□□□□□ -2.61
BBX-223ENST00000473542 TACC2O95359 2948 aa-1.23□□□□□ -2.61
BBX-223ENST00000473542 BIRC6Q9NR09 4857 aa-1.23□□□□□ -2.61
BBX-223ENST00000473542 CUBNO60494 3623 aa-1.23□□□□□ -2.61
BBX-223ENST00000473542 ARFGEF2Q9Y6D5 1785 aa-1.24□□□□□ -2.61
BBX-223ENST00000473542 PIK3C2BO00750 1634 aa-1.24□□□□□ -2.61
BBX-223ENST00000473542 H3BNG1 76 aa-1.24□□□□□ -2.61
BBX-223ENST00000473542 USP9YO00507 2555 aaPredicted RBP-1.24□□□□□ -2.61
BBX-223ENST00000473542 UMAD1C9J7I0 102 aa-1.25□□□□□ -2.61
BBX-223ENST00000473542 IFI27P40305 119 aaPredicted RBP-1.25□□□□□ -2.61
BBX-223ENST00000473542 TDRG1Q3Y452 100 aa-1.26□□□□□ -2.61
BBX-223ENST00000473542 TEP1Q99973 2627 aaKnown RBP-1.26□□□□□ -2.61
BBX-223ENST00000473542 SCN11AQ9UI33 1791 aa-1.28□□□□□ -2.61
BBX-223ENST00000473542 H0YAA0 97 aa-1.28□□□□□ -2.61
BBX-223ENST00000473542 ITPR3Q14573 2671 aa-1.29□□□□□ -2.62
BBX-223ENST00000473542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.29□□□□□ -2.62
BBX-223ENST00000473542 DMXL1Q9Y485 3027 aa-1.29□□□□□ -2.62
BBX-223ENST00000473542 ATP5EP2Q5VTU8 51 aa-1.29□□□□□ -2.62
BBX-223ENST00000473542 VPS13DQ5THJ4 4388 aa-1.3□□□□□ -2.62
BBX-223ENST00000473542 PKHD1L1Q86WI1 4243 aa-1.3□□□□□ -2.62
BBX-223ENST00000473542 DNAH3Q8TD57 4116 aa-1.3□□□□□ -2.62
BBX-223ENST00000473542 LYNX1G3V0Z9 82 aa-1.3□□□□□ -2.62
BBX-223ENST00000473542 HMGA1P17096 107 aaKnown RBP-1.3□□□□□ -2.62
BBX-223ENST00000473542 RYR2Q92736 4967 aa-1.31□□□□□ -2.62
BBX-223ENST00000473542 DSPP15924 2871 aaKnown RBP-1.31□□□□□ -2.62
BBX-223ENST00000473542 IFI6P09912 130 aa-1.31□□□□□ -2.62
BBX-223ENST00000473542 LAMA2P24043 3122 aaKnown RBP-1.31□□□□□ -2.62
BBX-223ENST00000473542 ANK3Q12955 4377 aaKnown RBP-1.31□□□□□ -2.62
BBX-223ENST00000473542 ANKRD11Q6UB99 2663 aaPredicted RBP-1.32□□□□□ -2.62
BBX-223ENST00000473542 ANKRD50Q9ULJ7 1429 aa-1.32□□□□□ -2.62
BBX-223ENST00000473542 VPS13BQ7Z7G8 4022 aa-1.34□□□□□ -2.62
BBX-223ENST00000473542 NDUFA4O00483 81 aa-1.34□□□□□ -2.62
BBX-223ENST00000473542 GNG2P59768 71 aa-1.34□□□□□ -2.62
BBX-223ENST00000473542 PRLHP81277 87 aa-1.34□□□□□ -2.62
BBX-223ENST00000473542 DEFB121Q5J5C9 76 aa-1.34□□□□□ -2.62
BBX-223ENST00000473542 LAMA1P25391 3075 aa-1.34□□□□□ -2.62
BBX-223ENST00000473542 DDX60LQ5H9U9 1706 aaKnown RBP-1.35□□□□□ -2.62
BBX-223ENST00000473542 FASNP49327 2511 aaKnown RBP-1.36□□□□□ -2.63
BBX-223ENST00000473542 NREPQ16612 68 aa-1.36□□□□□ -2.63
BBX-223ENST00000473542 ST20Q9HBF5 79 aa-1.36□□□□□ -2.63
BBX-223ENST00000473542 MAP3K1Q13233 1512 aa-1.36□□□□□ -2.63
BBX-223ENST00000473542 MUC17Q685J3 4493 aa-1.36□□□□□ -2.63
BBX-223ENST00000473542 THOC2Q8NI27 1593 aaKnown RBP-1.37□□□□□ -2.63
BBX-223ENST00000473542 RB1CC1Q8TDY2 1594 aa-1.38□□□□□ -2.63
BBX-223ENST00000473542 PLCH1Q4KWH8 1693 aa-1.38□□□□□ -2.63
BBX-223ENST00000473542 APOBP04114 4563 aaKnown RBP-1.38□□□□□ -2.63
BBX-223ENST00000473542 MED14O60244 1454 aa-1.38□□□□□ -2.63
BBX-223ENST00000473542 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.38□□□□□ -2.63
BBX-223ENST00000473542 CFAP43Q8NDM7 1665 aa-1.39□□□□□ -2.63
BBX-223ENST00000473542 ADIRFQ15847 76 aa-1.39□□□□□ -2.63
BBX-223ENST00000473542 DEFB130BP0DP73 79 aa-1.41□□□□□ -2.64
BBX-223ENST00000473542 DEFB130AP0DP74 79 aa-1.41□□□□□ -2.64
BBX-223ENST00000473542 DEFA5Q01523 94 aa-1.41□□□□□ -2.64
BBX-223ENST00000473542 S100A13Q99584 98 aa-1.41□□□□□ -2.64
BBX-223ENST00000473542 RNF213Q63HN8 5207 aa-1.41□□□□□ -2.64
BBX-223ENST00000473542 NIPBLQ6KC79 2804 aaeCLIP-1.41□□□□□ -2.64
BBX-223ENST00000473542 DEFB131BA0A096LNP1 70 aa-1.42□□□□□ -2.64
BBX-223ENST00000473542 KALRNO60229 2985 aa-1.43□□□□□ -2.64
BBX-223ENST00000473542 GCN1Q92616 2671 aaKnown RBP-1.43□□□□□ -2.64
BBX-223ENST00000473542 A0A087WXM4 84 aa-1.43□□□□□ -2.64
BBX-223ENST00000473542 IAPPP10997 89 aa-1.43□□□□□ -2.64
BBX-223ENST00000473542 MYO18BQ8IUG5 2567 aa-1.43□□□□□ -2.64
BBX-223ENST00000473542 ABCC1P33527 1531 aa-1.44□□□□□ -2.64
BBX-223ENST00000473542 KDM5DQ9BY66 1539 aa-1.44□□□□□ -2.64
BBX-223ENST00000473542 DCAF1Q9Y4B6 1507 aa-1.44□□□□□ -2.64
BBX-223ENST00000473542 ITSN1Q15811 1721 aa-1.44□□□□□ -2.64
BBX-223ENST00000473542 MTORP42345 2549 aa-1.44□□□□□ -2.64
BBX-223ENST00000473542 SMIM13P0DJ93 91 aa-1.45□□□□□ -2.64
BBX-223ENST00000473542 DNAH11Q96DT5 4516 aa-1.46□□□□□ -2.64
BBX-223ENST00000473542 MRPL33O75394 65 aaKnown RBP-1.46□□□□□ -2.64
BBX-223ENST00000473542 RICTORQ6R327 1708 aa-1.46□□□□□ -2.64
BBX-223ENST00000473542 USP9XQ93008 2570 aaPredicted RBP-1.48□□□□□ -2.65
BBX-223ENST00000473542 H3BUT2 72 aa-1.48□□□□□ -2.65
BBX-223ENST00000473542 CFAP74Q9C0B2 1584 aa-1.49□□□□□ -2.65
BBX-223ENST00000473542 S4R3F8 94 aa-1.49□□□□□ -2.65
BBX-223ENST00000473542 ZC3H13Q5T200 1668 aaKnown RBP-1.49□□□□□ -2.65
BBX-223ENST00000473542 ERVK-7P63135 1459 aa-1.5□□□□□ -2.65
BBX-223ENST00000473542 NBEAQ8NFP9 2946 aa-1.5□□□□□ -2.65
BBX-223ENST00000473542 CCDC18Q5T9S5 1454 aa-1.5□□□□□ -2.65
BBX-223ENST00000473542 SMARCA2P51531 1590 aa-1.51□□□□□ -2.65
BBX-223ENST00000473542 RNF17Q9BXT8 1623 aaKnown RBP-1.51□□□□□ -2.65
BBX-223ENST00000473542 KCNQ1DNQ9H478 68 aa-1.51□□□□□ -2.65
BBX-223ENST00000473542 HFM1A2PYH4 1435 aa-1.51□□□□□ -2.65
BBX-223ENST00000473542 BVES-AS1Q5T3Y7 98 aa-1.52□□□□□ -2.65
BBX-223ENST00000473542 CD163L1Q9NR16 1453 aa-1.52□□□□□ -2.65
BBX-223ENST00000473542 TJP1Q07157 1748 aa-1.53□□□□□ -2.65
BBX-223ENST00000473542 RALGAPBQ86X10 1494 aa-1.53□□□□□ -2.65
BBX-223ENST00000473542 DNHD1Q96M86 4753 aa-1.53□□□□□ -2.65
BBX-223ENST00000473542 ARHGAP35Q9NRY4 1499 aa-1.53□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms