RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 PPDPFLQ8WWR9 84 aa7.17□□□□□ -1.26
CHD3-209ENST00000473376 A0A0G2JQZ4 141 aa7.15□□□□□ -1.26
CHD3-209ENST00000473376 COX6B2Q6YFQ2 88 aa7.15□□□□□ -1.26
CHD3-209ENST00000473376 CLEC2BQ92478 149 aa7.15□□□□□ -1.26
CHD3-209ENST00000473376 TRBV7-7A0A0K0K1E9 115 aa7.14□□□□□ -1.27
CHD3-209ENST00000473376 hADV29S1A0JD25 119 aa7.14□□□□□ -1.27
CHD3-209ENST00000473376 M0R2T5 61 aa7.14□□□□□ -1.27
CHD3-209ENST00000473376 Q75L30 129 aa7.13□□□□□ -1.27
CHD3-209ENST00000473376 SCGB1D1O95968 90 aa7.12□□□□□ -1.27
CHD3-209ENST00000473376 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
CHD3-209ENST00000473376 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.12□□□□□ -1.27
CHD3-209ENST00000473376 Q6ZQY7 126 aa7.12□□□□□ -1.27
CHD3-209ENST00000473376 ATOH7Q8N100 152 aa7.12□□□□□ -1.27
CHD3-209ENST00000473376 BVES-AS1Q5T3Y7 98 aa7.1□□□□□ -1.27
CHD3-209ENST00000473376 IGFL1Q6UW32 110 aa7.1□□□□□ -1.27
CHD3-209ENST00000473376 ATP11AUNQ6ZP68 121 aa7.1□□□□□ -1.27
CHD3-209ENST00000473376 HSBP1L1C9JCN9 74 aa7.08□□□□□ -1.28
CHD3-209ENST00000473376 Q6Q795 121 aa7.07□□□□□ -1.28
CHD3-209ENST00000473376 LST1O00453 97 aa7.05□□□□□ -1.28
CHD3-209ENST00000473376 OBSCN-AS1Q96MR7 158 aa7.05□□□□□ -1.28
CHD3-209ENST00000473376 SNHG12Q9BXW3 62 aa7.05□□□□□ -1.28
CHD3-209ENST00000473376 SS18L2Q9UHA2 77 aa7.05□□□□□ -1.28
CHD3-209ENST00000473376 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
CHD3-209ENST00000473376 SNCGO76070 127 aa7.03□□□□□ -1.28
CHD3-209ENST00000473376 HIST1H2BLQ99880 126 aa7.03□□□□□ -1.28
CHD3-209ENST00000473376 S100A2P29034 98 aa7.02□□□□□ -1.29
CHD3-209ENST00000473376 HIST3H2BBQ8N257 126 aa7.02□□□□□ -1.29
CHD3-209ENST00000473376 C20orf166-AS1Q96NR2 134 aa7.02□□□□□ -1.29
CHD3-209ENST00000473376 GHRHP01286 108 aa7.01□□□□□ -1.29
CHD3-209ENST00000473376 C12orf57Q99622 126 aa7.01□□□□□ -1.29
CHD3-209ENST00000473376 DLEU1O43261 78 aa7□□□□□ -1.29
CHD3-209ENST00000473376 TEN1Q86WV5 123 aa7□□□□□ -1.29
CHD3-209ENST00000473376 H0YGX0 51 aa6.99□□□□□ -1.29
CHD3-209ENST00000473376 CFC1P0CG37 223 aa6.99□□□□□ -1.29
CHD3-209ENST00000473376 HIST1H4GQ99525 98 aa6.99□□□□□ -1.29
CHD3-209ENST00000473376 A8MUU9 505 aa6.98□□□□□ -1.29
CHD3-209ENST00000473376 Q96NJ1 140 aa6.98□□□□□ -1.29
CHD3-209ENST00000473376 COX8AP10176 69 aa6.97□□□□□ -1.29
CHD3-209ENST00000473376 A0A1B0GX51 115 aa6.96□□□□□ -1.3
CHD3-209ENST00000473376 H3BUT2 72 aa6.96□□□□□ -1.3
CHD3-209ENST00000473376 TRBV20-1A0A075B6N2 111 aa6.95□□□□□ -1.3
CHD3-209ENST00000473376 NDUFV3P56181 108 aaKnown RBP6.95□□□□□ -1.3
CHD3-209ENST00000473376 A0A0B4J2C4 111 aa6.93□□□□□ -1.3
CHD3-209ENST00000473376 S100A6P06703 90 aa6.93□□□□□ -1.3
CHD3-209ENST00000473376 HIGD1BQ9P298 99 aa6.93□□□□□ -1.3
CHD3-209ENST00000473376 RAB37Q96AX2 223 aa6.92□□□□□ -1.3
CHD3-209ENST00000473376 KRTAP9-8Q9BYQ0 159 aa6.91□□□□□ -1.3
CHD3-209ENST00000473376 A0A087WSZ3 146 aa6.9□□□□□ -1.3
CHD3-209ENST00000473376 H3BMG7 143 aa6.89□□□□□ -1.31
CHD3-209ENST00000473376 H3BQ85 93 aa6.89□□□□□ -1.31
CHD3-209ENST00000473376 FAM218AQ96MZ4 157 aa6.88□□□□□ -1.31
CHD3-209ENST00000473376 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
CHD3-209ENST00000473376 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
CHD3-209ENST00000473376 A6NJY4 79 aa6.85□□□□□ -1.31
CHD3-209ENST00000473376 S100A1P23297 94 aa6.85□□□□□ -1.31
CHD3-209ENST00000473376 LINC00313P59037 77 aa6.85□□□□□ -1.31
CHD3-209ENST00000473376 PRO1854Q9UHT4 67 aa6.85□□□□□ -1.31
CHD3-209ENST00000473376 A0A1W2PNM2 257 aa6.84□□□□□ -1.31
CHD3-209ENST00000473376 FABP2P12104 132 aa6.83□□□□□ -1.32
CHD3-209ENST00000473376 CEND1Q8N111 149 aa6.82□□□□□ -1.32
CHD3-209ENST00000473376 MPLKIPQ8TAP9 179 aa6.82□□□□□ -1.32
CHD3-209ENST00000473376 C14orf144Q96I85 54 aa6.82□□□□□ -1.32
CHD3-209ENST00000473376 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
CHD3-209ENST00000473376 DSCR10P59022 87 aa6.81□□□□□ -1.32
CHD3-209ENST00000473376 ANKRD29Q8N6D5 301 aa6.81□□□□□ -1.32
CHD3-209ENST00000473376 SIGMAR1Q99720 223 aa6.81□□□□□ -1.32
CHD3-209ENST00000473376 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
CHD3-209ENST00000473376 C2orf91Q6ZV80 131 aa6.8□□□□□ -1.32
CHD3-209ENST00000473376 RBM12B-AS1Q9P1G2 102 aa6.8□□□□□ -1.32
CHD3-209ENST00000473376 TMEM256-PLSCR3K7ERE1 68 aa6.79□□□□□ -1.32
CHD3-209ENST00000473376 IGKV4-1P06312 121 aa6.79□□□□□ -1.32
CHD3-209ENST00000473376 SPATA45Q537H7 98 aa6.79□□□□□ -1.32
CHD3-209ENST00000473376 ORMDL1Q9P0S3 153 aa6.79□□□□□ -1.32
CHD3-209ENST00000473376 DNAL4O96015 105 aa6.78□□□□□ -1.32
CHD3-209ENST00000473376 LINC00472Q9H8W2 130 aa6.78□□□□□ -1.32
CHD3-209ENST00000473376 PAM16Q9Y3D7 125 aa6.78□□□□□ -1.32
CHD3-209ENST00000473376 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.33
CHD3-209ENST00000473376 TRIAP1O43715 76 aa6.77□□□□□ -1.33
CHD3-209ENST00000473376 VAMP8Q9BV40 100 aa6.77□□□□□ -1.33
CHD3-209ENST00000473376 FAM236DA0A1B0GTK5 79 aa6.76□□□□□ -1.33
CHD3-209ENST00000473376 MT2AP02795 61 aa6.76□□□□□ -1.33
CHD3-209ENST00000473376 FAM236CP0DP71 79 aa6.76□□□□□ -1.33
CHD3-209ENST00000473376 COX6CP09669 75 aa6.75□□□□□ -1.33
CHD3-209ENST00000473376 HRES1P13985 223 aa6.75□□□□□ -1.33
CHD3-209ENST00000473376 C8orf87E5RJ46 101 aa6.74□□□□□ -1.33
CHD3-209ENST00000473376 UBE2V1Q13404 147 aa6.74□□□□□ -1.33
CHD3-209ENST00000473376 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
CHD3-209ENST00000473376 USH2AO75445 5202 aa6.73□□□□□ -1.33
CHD3-209ENST00000473376 TRACP01848 142 aa6.73□□□□□ -1.33
CHD3-209ENST00000473376 FXYD2P54710 66 aa6.73□□□□□ -1.33
CHD3-209ENST00000473376 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
CHD3-209ENST00000473376 MTURNQ8N3F0 131 aa6.73□□□□□ -1.33
CHD3-209ENST00000473376 CCKP06307 115 aa6.72□□□□□ -1.33
CHD3-209ENST00000473376 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
CHD3-209ENST00000473376 IGHV6-1A0A0B4J1U7 121 aa6.69□□□□□ -1.34
CHD3-209ENST00000473376 J3KT08 172 aa6.69□□□□□ -1.34
CHD3-209ENST00000473376 MT1FP04733 61 aa6.69□□□□□ -1.34
CHD3-209ENST00000473376 PSMB2P49721 201 aa6.69□□□□□ -1.34
CHD3-209ENST00000473376 HSD52Q0P140 79 aa6.69□□□□□ -1.34
CHD3-209ENST00000473376 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms