RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 Q6ZUT4 128 aa-0.66□□□□□ -2.52
CLK1-209ENST00000472679 TMEM263Q8WUH6 116 aaKnown RBP-0.66□□□□□ -2.52
CLK1-209ENST00000472679 RABAC1Q9UI14 185 aa-0.66□□□□□ -2.52
CLK1-209ENST00000472679 TRGV1A0A0A0MS02 117 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 HCG22E2RYF7 251 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 MRPL33O75394 65 aaKnown RBP-0.67□□□□□ -2.52
CLK1-209ENST00000472679 FGF7P21781 194 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 BTG2P78543 158 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 PSMG4Q5JS54 123 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 C9orf62Q8N4C0 152 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 FXYD6Q9H0Q3 95 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 PRO1933Q9H354 126 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 NPVFQ9HCQ7 196 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 HIGD1AQ9Y241 93 aa-0.67□□□□□ -2.52
CLK1-209ENST00000472679 GCC2Q8IWJ2 1684 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 LOC100130705A0A1B0GUX0 176 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 FAM24AA6NFZ4 105 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 FAM223BA6NKX1 122 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 H7BZZ5 65 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 NCR2O95944 276 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 S100PP25815 95 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 CMPK1P30085 196 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 PKIAP61925 76 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 AKAP14Q86UN6 197 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 FAM223AQ8IWN6 122 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 TCTE3Q8IZS6 198 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 TMEM167AQ8TBQ9 72 aa-0.68□□□□□ -2.52
CLK1-209ENST00000472679 TRBV10-3A0A0K0K1G6 114 aa-0.69□□□□□ -2.52
CLK1-209ENST00000472679 IQCF6A8MYZ5 107 aa-0.69□□□□□ -2.52
CLK1-209ENST00000472679 DEGS1O15121 323 aa-0.69□□□□□ -2.52
CLK1-209ENST00000472679 PRCDQ00LT1 54 aa-0.69□□□□□ -2.52
CLK1-209ENST00000472679 SSBP1Q04837 148 aaKnown RBP-0.69□□□□□ -2.52
CLK1-209ENST00000472679 ALKAL2Q6UX46 152 aa-0.69□□□□□ -2.52
CLK1-209ENST00000472679 LCN9Q8WX39 176 aa-0.69□□□□□ -2.52
CLK1-209ENST00000472679 HSPB11Q9Y547 144 aa-0.69□□□□□ -2.52
CLK1-209ENST00000472679 TRBV7-1A0A0A6YYK4 115 aa-0.7□□□□□ -2.52
CLK1-209ENST00000472679 BORCS7-ASMTA0A0B4J1R7 106 aa-0.7□□□□□ -2.52
CLK1-209ENST00000472679 UBE2L5PA0A1B0GUS4 154 aa-0.7□□□□□ -2.52
CLK1-209ENST00000472679 M0R2Z0 102 aa-0.7□□□□□ -2.52
CLK1-209ENST00000472679 LINC01590Q5TEZ4 76 aa-0.7□□□□□ -2.52
CLK1-209ENST00000472679 ZNF818PQ6ZRF7 136 aa-0.7□□□□□ -2.52
CLK1-209ENST00000472679 GAFA1Q96PS6 74 aa-0.7□□□□□ -2.52
CLK1-209ENST00000472679 ERG28Q9UKR5 140 aa-0.7□□□□□ -2.52
CLK1-209ENST00000472679 LSM2Q9Y333 95 aaKnown RBP-0.7□□□□□ -2.52
CLK1-209ENST00000472679 M0QY20 66 aa-0.71□□□□□ -2.52
CLK1-209ENST00000472679 M0R3E3 92 aa-0.71□□□□□ -2.52
CLK1-209ENST00000472679 SIX6O95475 246 aa-0.71□□□□□ -2.52
CLK1-209ENST00000472679 MRPS10P82664 201 aaKnown RBP-0.71□□□□□ -2.52
CLK1-209ENST00000472679 PLGLAQ15195 96 aa-0.71□□□□□ -2.52
CLK1-209ENST00000472679 COX7B2Q8TF08 81 aa-0.71□□□□□ -2.52
CLK1-209ENST00000472679 TMEM203Q969S6 136 aa-0.71□□□□□ -2.52
CLK1-209ENST00000472679 ZNF815PA8K554 130 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 J3QLW9 94 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 NDUFA1O15239 70 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 NDUFA3O95167 84 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 NBEAP1P0C6P0 100 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 PIPP12273 146 aaPredicted RBP-0.72□□□□□ -2.52
CLK1-209ENST00000472679 WT1-ASQ06250 92 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 MIC13Q5XKP0 118 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 LINC00470Q9BZP3 86 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 SCN3BQ9NY72 215 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 C6orf48Q9UBA6 75 aa-0.72□□□□□ -2.52
CLK1-209ENST00000472679 TRBV7-7A0A0K0K1E9 115 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 ETDCA0A1B0GVM5 59 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 HMGN4O00479 90 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 ACYP1P07311 99 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 LINC00694P0DN24 101 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 SCGB1A1P11684 91 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 EDDM3BP56851 147 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 NMSQ5H8A3 153 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 C10orf128Q5T292 105 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 SLC48A1Q6P1K1 146 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 HEPN1Q6WQI6 88 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 MAFIPQ8WZ33 124 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 AQP10Q96PS8 301 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 MRPL34Q9BQ48 92 aaKnown RBP-0.73□□□□□ -2.53
CLK1-209ENST00000472679 RPRMQ9NS64 109 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 LINC00312Q9Y6C7 94 aa-0.73□□□□□ -2.53
CLK1-209ENST00000472679 CPSF4LA6NMK7 179 aaKnown RBP-0.74□□□□□ -2.53
CLK1-209ENST00000472679 IAPPP10997 89 aa-0.74□□□□□ -2.53
CLK1-209ENST00000472679 POLR2KP53803 58 aaKnown RBP-0.74□□□□□ -2.53
CLK1-209ENST00000472679 MUSTN1Q8IVN3 82 aa-0.74□□□□□ -2.53
CLK1-209ENST00000472679 MAGOHBQ96A72 148 aaKnown RBP-0.74□□□□□ -2.53
CLK1-209ENST00000472679 CYP4F30PQ9H0H9 118 aa-0.74□□□□□ -2.53
CLK1-209ENST00000472679 SPCS1Q9Y6A9 102 aa-0.74□□□□□ -2.53
CLK1-209ENST00000472679 ARL2-SNX15V9GYD0 113 aa-0.74□□□□□ -2.53
CLK1-209ENST00000472679 TRBV25-1A0A075B6N4 114 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 TRAV12-3A0A0B4J271 114 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 GNG14A0A1W2PPG7 69 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 D6R8Y8 96 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 H0YJX3 145 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 CCDC179H3BU77 68 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 M0R2P5 195 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 CFAP126Q5VTH2 177 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 Q6AWC8 147 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 DEFB105AQ8NG35 78 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 SMIM2Q9BVW6 85 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 V9GYV3 84 aa-0.75□□□□□ -2.53
CLK1-209ENST00000472679 TRBV7-3A0A075B6L6 115 aa-0.76□□□□□ -2.53
CLK1-209ENST00000472679 CRYM-AS1A6NIL9 109 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms