RNA–Protein interactions for RNA: ENST00000472098.5

MDH1-210, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-210ENST00000472098 COL6A6A6NMZ7 2263 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 SPRR1BP22528 89 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 RPL37AP61513 92 aaKnown RBP2.98□□□□□ -1.93
MDH1-210ENST00000472098 PCOTHQ58A44 107 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 LELP1Q5T871 98 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 KRTAP26-1Q6PEX3 210 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 DEFB105AQ8NG35 78 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 C20orf166-AS1Q96NR2 134 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 SDK1Q7Z5N4 2213 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 CNOT1A5YKK6 2376 aaKnown RBP2.98□□□□□ -1.93
MDH1-210ENST00000472098 XIRP2A4UGR9 3374 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 FRYQ5TBA9 3013 aa2.98□□□□□ -1.93
MDH1-210ENST00000472098 C4orf3Q8WVX3 66 aa2.97□□□□□ -1.93
MDH1-210ENST00000472098 ALMS1Q8TCU4 4167 aa2.96□□□□□ -1.94
MDH1-210ENST00000472098 CHD9Q3L8U1 2897 aa2.96□□□□□ -1.94
MDH1-210ENST00000472098 MKI67P46013 3256 aaKnown RBP2.95□□□□□ -1.94
MDH1-210ENST00000472098 EP300Q09472 2414 aaPredicted RBP2.95□□□□□ -1.94
MDH1-210ENST00000472098 AKAP6Q13023 2319 aa2.94□□□□□ -1.94
MDH1-210ENST00000472098 DNAH14Q0VDD8 3507 aa2.94□□□□□ -1.94
MDH1-210ENST00000472098 KALRNO60229 2985 aa2.94□□□□□ -1.94
MDH1-210ENST00000472098 LY6G6CO95867 125 aa2.94□□□□□ -1.94
MDH1-210ENST00000472098 MRPL34Q9BQ48 92 aaKnown RBP2.94□□□□□ -1.94
MDH1-210ENST00000472098 LAMA2P24043 3122 aaKnown RBP2.94□□□□□ -1.94
MDH1-210ENST00000472098 CACNA1HO95180 2353 aa2.93□□□□□ -1.94
MDH1-210ENST00000472098 DEFB132Q7Z7B7 95 aa2.93□□□□□ -1.94
MDH1-210ENST00000472098 CCL19Q99731 98 aa2.93□□□□□ -1.94
MDH1-210ENST00000472098 PIEZO2Q9H5I5 2752 aa2.93□□□□□ -1.94
MDH1-210ENST00000472098 ANKHD1Q8IWZ3 2542 aaKnown RBP2.92□□□□□ -1.94
MDH1-210ENST00000472098 FRYLO94915 3013 aa2.92□□□□□ -1.94
MDH1-210ENST00000472098 CFAP47Q6ZTR5 3102 aa2.91□□□□□ -1.94
MDH1-210ENST00000472098 DEFB113Q30KQ7 82 aa2.91□□□□□ -1.94
MDH1-210ENST00000472098 CREBBPQ92793 2442 aa2.91□□□□□ -1.94
MDH1-210ENST00000472098 TRIOO75962 3097 aa2.91□□□□□ -1.94
MDH1-210ENST00000472098 ACACAQ13085 2346 aa2.91□□□□□ -1.94
MDH1-210ENST00000472098 C2CD3Q4AC94 2353 aa2.9□□□□□ -1.94
MDH1-210ENST00000472098 NCOR1O75376 2440 aa2.9□□□□□ -1.94
MDH1-210ENST00000472098 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.9□□□□□ -1.952e-6■■■■■ 33.3
MDH1-210ENST00000472098 H3BNG1 76 aa2.9□□□□□ -1.95
MDH1-210ENST00000472098 C5orf42Q9H799 3197 aa2.9□□□□□ -1.95
MDH1-210ENST00000472098 KRTAP13-1Q8IUC0 172 aa2.89□□□□□ -1.95
MDH1-210ENST00000472098 ANKRD17O75179 2603 aaKnown RBP2.89□□□□□ -1.95
MDH1-210ENST00000472098 A0A087WTM6 91 aa2.88□□□□□ -1.95
MDH1-210ENST00000472098 PTPRZ1P23471 2315 aaPredicted RBP2.88□□□□□ -1.95
MDH1-210ENST00000472098 USP34Q70CQ2 3546 aa2.88□□□□□ -1.95
MDH1-210ENST00000472098 DSPP15924 2871 aaKnown RBP2.87□□□□□ -1.95
MDH1-210ENST00000472098 LAMA1P25391 3075 aa2.86□□□□□ -1.95
MDH1-210ENST00000472098 DEFB130BP0DP73 79 aa2.86□□□□□ -1.95
MDH1-210ENST00000472098 DEFB130AP0DP74 79 aa2.86□□□□□ -1.95
MDH1-210ENST00000472098 COX6B2Q6YFQ2 88 aa2.86□□□□□ -1.95
MDH1-210ENST00000472098 Q96NJ1 140 aa2.86□□□□□ -1.95
MDH1-210ENST00000472098 SPTBN5Q9NRC6 3674 aaKnown RBP2.86□□□□□ -1.95
MDH1-210ENST00000472098 WDFY4Q6ZS81 3184 aa2.86□□□□□ -1.95
MDH1-210ENST00000472098 PRUNE2Q8WUY3 3088 aa2.85□□□□□ -1.95
MDH1-210ENST00000472098 SPTA1P02549 2419 aa2.85□□□□□ -1.95
MDH1-210ENST00000472098 AKAP13Q12802 2813 aa2.85□□□□□ -1.95
MDH1-210ENST00000472098 LAMA3Q16787 3333 aa2.83□□□□□ -1.96
MDH1-210ENST00000472098 DEFB136Q30KP8 78 aa2.83□□□□□ -1.96
MDH1-210ENST00000472098 LINC01556Q5JQF7 62 aa2.83□□□□□ -1.96
MDH1-210ENST00000472098 C10orf99Q6UWK7 81 aa2.83□□□□□ -1.96
MDH1-210ENST00000472098 BRCA2P51587 3418 aa2.83□□□□□ -1.96
MDH1-210ENST00000472098 MAP1AP78559 2803 aaPredicted RBP2.83□□□□□ -1.96
MDH1-210ENST00000472098 FREM2Q5SZK8 3169 aa2.82□□□□□ -1.96
MDH1-210ENST00000472098 A0A096LPF7 62 aa2.82□□□□□ -1.96
MDH1-210ENST00000472098 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
MDH1-210ENST00000472098 ABCA2Q9BZC7 2435 aa2.82□□□□□ -1.96
MDH1-210ENST00000472098 PRRC2CQ9Y520 2896 aaKnown RBP2.82□□□□□ -1.96
MDH1-210ENST00000472098 TACC2O95359 2948 aa2.81□□□□□ -1.96
MDH1-210ENST00000472098 H0YAA0 97 aa2.81□□□□□ -1.96
MDH1-210ENST00000472098 SPART-AS1P0CW21 52 aa2.81□□□□□ -1.96
MDH1-210ENST00000472098 PSORS1C2Q9UIG4 136 aa2.81□□□□□ -1.96
MDH1-210ENST00000472098 CEP290O15078 2479 aa2.8□□□□□ -1.96
MDH1-210ENST00000472098 SPTAN1Q13813 2472 aaKnown RBP2.8□□□□□ -1.96
MDH1-210ENST00000472098 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
MDH1-210ENST00000472098 ZDBF2Q9HCK1 2354 aa2.79□□□□□ -1.96
MDH1-210ENST00000472098 NBDYA0A0U1RRE5 68 aa2.79□□□□□ -1.96
MDH1-210ENST00000472098 DCHS1Q96JQ0 3298 aa2.79□□□□□ -1.96
MDH1-210ENST00000472098 DMXL2Q8TDJ6 3036 aa2.78□□□□□ -1.96
MDH1-210ENST00000472098 SPG11Q96JI7 2443 aa2.78□□□□□ -1.96
MDH1-210ENST00000472098 A0A0G2JQZ4 141 aa2.78□□□□□ -1.96
MDH1-210ENST00000472098 Q6ZSA8 131 aa2.78□□□□□ -1.96
MDH1-210ENST00000472098 CHD6Q8TD26 2715 aa2.78□□□□□ -1.96
MDH1-210ENST00000472098 ITPR1Q14643 2758 aa2.78□□□□□ -1.97
MDH1-210ENST00000472098 VCANP13611 3396 aa2.77□□□□□ -1.97
MDH1-210ENST00000472098 IGF2RP11717 2491 aa2.77□□□□□ -1.97
MDH1-210ENST00000472098 H1FX-AS1Q4G0G2 97 aa2.77□□□□□ -1.97
MDH1-210ENST00000472098 DMDP11532 3685 aa2.77□□□□□ -1.97
MDH1-210ENST00000472098 SPTBN4Q9H254 2564 aa2.77□□□□□ -1.97
MDH1-210ENST00000472098 NCOR2Q9Y618 2525 aa2.77□□□□□ -1.97
MDH1-210ENST00000472098 GVINP1Q7Z2Y8 2422 aa2.76□□□□□ -1.97
MDH1-210ENST00000472098 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
MDH1-210ENST00000472098 NBASA2RRP1 2371 aa2.76□□□□□ -1.97
MDH1-210ENST00000472098 REV3LO60673 3130 aa2.75□□□□□ -1.97
MDH1-210ENST00000472098 CDH23Q9H251 3354 aa2.75□□□□□ -1.97
MDH1-210ENST00000472098 TENM2Q9NT68 2774 aa2.75□□□□□ -1.97
MDH1-210ENST00000472098 PRLHP81277 87 aa2.74□□□□□ -1.97
MDH1-210ENST00000472098 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
MDH1-210ENST00000472098 WDFY3Q8IZQ1 3526 aa2.73□□□□□ -1.97
MDH1-210ENST00000472098 CSPG4Q6UVK1 2322 aa2.73□□□□□ -1.97
MDH1-210ENST00000472098 DEFB124Q8NES8 71 aa2.73□□□□□ -1.97
MDH1-210ENST00000472098 CELSR2Q9HCU4 2923 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms