RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 IGLV5-39A0A0G2JS06 123 aa3.49□□□□□ -1.85
VARS-222ENST00000470953 RPL37AP8A6NKH3 93 aa3.49□□□□□ -1.85
VARS-222ENST00000470953 H0Y9J4 135 aa3.49□□□□□ -1.85
VARS-222ENST00000470953 PLNP26678 52 aa3.49□□□□□ -1.85
VARS-222ENST00000470953 RPL28P46779 137 aaKnown RBP3.49□□□□□ -1.85
VARS-222ENST00000470953 LINC00158P58513 81 aa3.49□□□□□ -1.85
VARS-222ENST00000470953 HIST1H4AP62805 103 aaKnown RBP3.49□□□□□ -1.85
VARS-222ENST00000470953 PRR15Q8IV56 129 aa3.49□□□□□ -1.85
VARS-222ENST00000470953 IGKV2-28A0A075B6P5 120 aa3.48□□□□□ -1.85
VARS-222ENST00000470953 TRBV7-6A0A0J9YX20 115 aa3.48□□□□□ -1.85
VARS-222ENST00000470953 KRTAP4-16G5E9R7 235 aaPredicted RBP3.48□□□□□ -1.85
VARS-222ENST00000470953 IGKV2D-28P01615 120 aa3.48□□□□□ -1.85
VARS-222ENST00000470953 ATP5EP56381 51 aaPredicted RBP3.48□□□□□ -1.85
VARS-222ENST00000470953 NPC2P61916 151 aa3.48□□□□□ -1.85
VARS-222ENST00000470953 COX17Q14061 63 aa3.48□□□□□ -1.85
VARS-222ENST00000470953 LINC00643Q86TS7 51 aa3.48□□□□□ -1.85
VARS-222ENST00000470953 SND1-IT1Q9HBX3 110 aa3.48□□□□□ -1.85
VARS-222ENST00000470953 TMEM223A0PJW6 202 aa3.47□□□□□ -1.85
VARS-222ENST00000470953 H3BT86 120 aa3.47□□□□□ -1.85
VARS-222ENST00000470953 BCE1O60756 84 aa3.47□□□□□ -1.85
VARS-222ENST00000470953 LGALS3P17931 250 aaKnown RBP3.47□□□□□ -1.85
VARS-222ENST00000470953 KRTAP11-1Q8IUC1 163 aa3.47□□□□□ -1.85
VARS-222ENST00000470953 KRTAP7-1Q8IUC3 87 aa3.47□□□□□ -1.85
VARS-222ENST00000470953 SERP2Q8N6R1 65 aa3.47□□□□□ -1.85
VARS-222ENST00000470953 LINC00167Q96N53 147 aa3.47□□□□□ -1.85
VARS-222ENST00000470953 NDUFA12Q9UI09 145 aa3.47□□□□□ -1.85
VARS-222ENST00000470953 IGLV1-50A0A075B6I6 118 aa3.46□□□□□ -1.86
VARS-222ENST00000470953 SLC25A20O43772 301 aa3.46□□□□□ -1.86
VARS-222ENST00000470953 ZNF861PO60384 105 aa3.46□□□□□ -1.86
VARS-222ENST00000470953 TCL1BO95988 128 aa3.46□□□□□ -1.86
VARS-222ENST00000470953 IGLV5-37A0A075B6J1 123 aa3.45□□□□□ -1.86
VARS-222ENST00000470953 K7ERJ3 54 aa3.45□□□□□ -1.86
VARS-222ENST00000470953 NCR3O14931 201 aa3.45□□□□□ -1.86
VARS-222ENST00000470953 PSMB2P49721 201 aa3.45□□□□□ -1.86
VARS-222ENST00000470953 KMT2DO14686 5537 aa3.44□□□□□ -1.86
VARS-222ENST00000470953 TRBV10-2A0A0K0K1G8 114 aa3.44□□□□□ -1.86
VARS-222ENST00000470953 hADV29S1A0JD25 119 aa3.44□□□□□ -1.86
VARS-222ENST00000470953 LEPROTO15243 131 aa3.44□□□□□ -1.86
VARS-222ENST00000470953 PRLHP81277 87 aa3.44□□□□□ -1.86
VARS-222ENST00000470953 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
VARS-222ENST00000470953 MIR7-3HGQ8N6C7 128 aa3.44□□□□□ -1.86
VARS-222ENST00000470953 DSCR8Q96T75 97 aa3.44□□□□□ -1.86
VARS-222ENST00000470953 M0R378 163 aa3.43□□□□□ -1.86
VARS-222ENST00000470953 KRTAP1-4P0C5Y4 121 aa3.43□□□□□ -1.86
VARS-222ENST00000470953 ATXN8Q156A1 80 aa3.43□□□□□ -1.86
VARS-222ENST00000470953 PCP2Q8IVA1 136 aa3.43□□□□□ -1.86
VARS-222ENST00000470953 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
VARS-222ENST00000470953 HIST1H4GQ99525 98 aa3.43□□□□□ -1.86
VARS-222ENST00000470953 HIGD2AQ9BW72 106 aa3.43□□□□□ -1.86
VARS-222ENST00000470953 IGKV2D-26A0A0A0MRZ7 120 aa3.42□□□□□ -1.86
VARS-222ENST00000470953 ETDCA0A1B0GVM5 59 aa3.42□□□□□ -1.86
VARS-222ENST00000470953 PRYO14603 147 aa3.42□□□□□ -1.86
VARS-222ENST00000470953 TSPEAR-AS2P59090 65 aa3.42□□□□□ -1.86
VARS-222ENST00000470953 S100A7L2Q5SY68 101 aa3.42□□□□□ -1.86
VARS-222ENST00000470953 DAND5Q8N907 189 aa3.42□□□□□ -1.86
VARS-222ENST00000470953 TYMSOSQ8TAI1 123 aa3.42□□□□□ -1.86
VARS-222ENST00000470953 RETNLBQ9BQ08 111 aa3.42□□□□□ -1.86
VARS-222ENST00000470953 ZNF706Q9Y5V0 76 aaPredicted RBP3.42□□□□□ -1.86
VARS-222ENST00000470953 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
VARS-222ENST00000470953 LOC107984156A0A0G2JMH3 177 aa3.41□□□□□ -1.86
VARS-222ENST00000470953 NDUFC1O43677 76 aa3.41□□□□□ -1.86
VARS-222ENST00000470953 ARL17AQ8IVW1 177 aa3.41□□□□□ -1.86
VARS-222ENST00000470953 A0A0B4J2C4 111 aa3.4□□□□□ -1.87
VARS-222ENST00000470953 ZNF815PA8K554 130 aa3.4□□□□□ -1.87
VARS-222ENST00000470953 TRBV10-3A0A0K0K1G6 114 aa3.39□□□□□ -1.87
VARS-222ENST00000470953 H3BS24 57 aa3.39□□□□□ -1.87
VARS-222ENST00000470953 NDUFS5O43920 106 aa3.39□□□□□ -1.87
VARS-222ENST00000470953 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
VARS-222ENST00000470953 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
VARS-222ENST00000470953 SCGB1D4Q6XE38 83 aa3.39□□□□□ -1.87
VARS-222ENST00000470953 FP248Q71RG6 208 aaPredicted RBP3.39□□□□□ -1.87
VARS-222ENST00000470953 Q8NDZ9 215 aa3.39□□□□□ -1.87
VARS-222ENST00000470953 KRTAP2-4Q9BYR9 128 aa3.39□□□□□ -1.87
VARS-222ENST00000470953 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
VARS-222ENST00000470953 TRAV23DV6A0A075B6W5 121 aa3.38□□□□□ -1.87
VARS-222ENST00000470953 A0A087X002 238 aa3.38□□□□□ -1.87
VARS-222ENST00000470953 A0A0J9YXY3 114 aa3.38□□□□□ -1.87
VARS-222ENST00000470953 M0R2T5 61 aa3.38□□□□□ -1.87
VARS-222ENST00000470953 TPRXLQ17RH7 258 aa3.38□□□□□ -1.87
VARS-222ENST00000470953 KTN1-AS1Q86SY8 53 aa3.38□□□□□ -1.87
VARS-222ENST00000470953 KRTAP13-1Q8IUC0 172 aa3.38□□□□□ -1.87
VARS-222ENST00000470953 LINC00304Q8N9R0 145 aa3.38□□□□□ -1.87
VARS-222ENST00000470953 PRO1854Q9UHT4 67 aa3.38□□□□□ -1.87
VARS-222ENST00000470953 Q6JHZ5 121 aa3.37□□□□□ -1.87
VARS-222ENST00000470953 LINC00337Q8N6G1 96 aa3.37□□□□□ -1.87
VARS-222ENST00000470953 KCNQ1DNQ9H478 68 aa3.37□□□□□ -1.87
VARS-222ENST00000470953 RBM12B-AS1Q9P1G2 102 aa3.37□□□□□ -1.87
VARS-222ENST00000470953 TEX49A0A1B0GTD5 131 aa3.36□□□□□ -1.87
VARS-222ENST00000470953 TIMM17BO60830 172 aa3.36□□□□□ -1.87
VARS-222ENST00000470953 KLKP1Q107X0 134 aa3.36□□□□□ -1.87
VARS-222ENST00000470953 ASB16-AS1Q495Z4 193 aa3.36□□□□□ -1.87
VARS-222ENST00000470953 ATP5EP2Q5VTU8 51 aa3.36□□□□□ -1.87
VARS-222ENST00000470953 SPRR4Q96PI1 79 aa3.36□□□□□ -1.87
VARS-222ENST00000470953 IGLV7-46A0A075B6I9 117 aa3.35□□□□□ -1.87
VARS-222ENST00000470953 IGLV9-49A0A0B4J1Y8 123 aa3.35□□□□□ -1.87
VARS-222ENST00000470953 ZNF73O43830 326 aaPredicted RBP3.35□□□□□ -1.87
VARS-222ENST00000470953 COX6CP09669 75 aa3.35□□□□□ -1.87
VARS-222ENST00000470953 CFC1P0CG37 223 aa3.35□□□□□ -1.87
VARS-222ENST00000470953 Q6ZRX8 168 aa3.35□□□□□ -1.87
VARS-222ENST00000470953 LINC00308Q8TCZ7 52 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms