RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 LINC01600Q96MT4 127 aa5.91□□□□□ -1.46
CCM2-204ENST00000470837 DSCR8Q96T75 97 aa5.91□□□□□ -1.46
CCM2-204ENST00000470837 DNAH8Q96JB1 4490 aa5.91□□□□□ -1.46
CCM2-204ENST00000470837 C21orf62-AS1Q17RA5 79 aa5.89□□□□□ -1.47
CCM2-204ENST00000470837 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
CCM2-204ENST00000470837 C9orf153Q5TBE3 101 aa5.89□□□□□ -1.47
CCM2-204ENST00000470837 C3orf22Q8N5N4 141 aa5.89□□□□□ -1.47
CCM2-204ENST00000470837 IGLV9-49A0A0B4J1Y8 123 aa5.88□□□□□ -1.47
CCM2-204ENST00000470837 J3QR89 54 aa5.88□□□□□ -1.47
CCM2-204ENST00000470837 PDE6GP18545 87 aa5.88□□□□□ -1.47
CCM2-204ENST00000470837 Q8N1X5 172 aa5.88□□□□□ -1.47
CCM2-204ENST00000470837 CRYGAP11844 174 aa5.87□□□□□ -1.47
CCM2-204ENST00000470837 FAM229BQ4G0N7 80 aa5.87□□□□□ -1.47
CCM2-204ENST00000470837 Q6JHZ5 121 aa5.87□□□□□ -1.47
CCM2-204ENST00000470837 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
CCM2-204ENST00000470837 ANAPC11Q9NYG5 84 aa5.86□□□□□ -1.47
CCM2-204ENST00000470837 SMIM29Q86T20 159 aa5.85□□□□□ -1.47
CCM2-204ENST00000470837 Q8NBF4 154 aa5.85□□□□□ -1.47
CCM2-204ENST00000470837 OBSCN-AS1Q96MR7 158 aa5.85□□□□□ -1.47
CCM2-204ENST00000470837 VPS25Q9BRG1 176 aa5.85□□□□□ -1.47
CCM2-204ENST00000470837 KRTAP10-4P60372 401 aaPredicted RBP5.84□□□□□ -1.47
CCM2-204ENST00000470837 MOBPQ13875 183 aa5.84□□□□□ -1.47
CCM2-204ENST00000470837 APOBP04114 4563 aaKnown RBP5.83□□□□□ -1.48
CCM2-204ENST00000470837 IGLV8-61A0A075B6I0 122 aa5.83□□□□□ -1.48
CCM2-204ENST00000470837 LOC110117498A0A087WWA1 95 aa5.83□□□□□ -1.48
CCM2-204ENST00000470837 TRBV7-4A0A0J9YYF1 115 aa5.82□□□□□ -1.48
CCM2-204ENST00000470837 K7ERU9 68 aa5.82□□□□□ -1.48
CCM2-204ENST00000470837 CCKP06307 115 aa5.82□□□□□ -1.48
CCM2-204ENST00000470837 SSBP3-AS1Q7Z2R9 100 aa5.82□□□□□ -1.48
CCM2-204ENST00000470837 TYMSOSQ8TAI1 123 aa5.81□□□□□ -1.48
CCM2-204ENST00000470837 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
CCM2-204ENST00000470837 C4orf48Q5BLP8 95 aa5.8□□□□□ -1.48
CCM2-204ENST00000470837 IGFL1Q6UW32 110 aa5.8□□□□□ -1.48
CCM2-204ENST00000470837 Q6ZQT0 140 aa5.8□□□□□ -1.48
CCM2-204ENST00000470837 SRRM2Q9UQ35 2752 aaKnown RBP5.79□□□□□ -1.48
CCM2-204ENST00000470837 EPPK1P58107 5090 aaKnown RBP5.79□□□□□ -1.48
CCM2-204ENST00000470837 A0A087X002 238 aa5.79□□□□□ -1.48
CCM2-204ENST00000470837 ACYP1P07311 99 aa5.79□□□□□ -1.48
CCM2-204ENST00000470837 A0A1B0GW54 56 aa5.78□□□□□ -1.48
CCM2-204ENST00000470837 PRR26Q8N8Z3 221 aa5.78□□□□□ -1.48
CCM2-204ENST00000470837 FAM240AA0A1B0GVK7 77 aa5.76□□□□□ -1.49
CCM2-204ENST00000470837 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
CCM2-204ENST00000470837 HRCT1Q6UXD1 115 aa5.76□□□□□ -1.49
CCM2-204ENST00000470837 RYR1P21817 5038 aa5.75□□□□□ -1.49
CCM2-204ENST00000470837 CD164Q04900 197 aa5.75□□□□□ -1.49
CCM2-204ENST00000470837 Q6Q795 121 aa5.75□□□□□ -1.49
CCM2-204ENST00000470837 UBL5Q9BZL1 73 aa5.75□□□□□ -1.49
CCM2-204ENST00000470837 VPS13BQ7Z7G8 4022 aa5.75□□□□□ -1.49
CCM2-204ENST00000470837 FAT1Q14517 4588 aa5.75□□□□□ -1.49
CCM2-204ENST00000470837 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
CCM2-204ENST00000470837 A0A0G2JQZ4 141 aa5.74□□□□□ -1.49
CCM2-204ENST00000470837 A0A1W2PNM2 257 aa5.74□□□□□ -1.49
CCM2-204ENST00000470837 SPAG11AQ6PDA7 123 aa5.74□□□□□ -1.49
CCM2-204ENST00000470837 SS18L2Q9UHA2 77 aa5.74□□□□□ -1.49
CCM2-204ENST00000470837 A0A087WSZ3 146 aa5.73□□□□□ -1.49
CCM2-204ENST00000470837 TRBV7-7A0A0K0K1E9 115 aa5.73□□□□□ -1.49
CCM2-204ENST00000470837 LINC00304Q8N9R0 145 aa5.73□□□□□ -1.49
CCM2-204ENST00000470837 HSPG2P98160 4391 aa5.73□□□□□ -1.49
CCM2-204ENST00000470837 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
CCM2-204ENST00000470837 NREPQ16612 68 aa5.72□□□□□ -1.49
CCM2-204ENST00000470837 LIMD2Q9BT23 127 aa5.72□□□□□ -1.49
CCM2-204ENST00000470837 SPINK1P00995 79 aa5.71□□□□□ -1.5
CCM2-204ENST00000470837 OXTP01178 125 aa5.71□□□□□ -1.5
CCM2-204ENST00000470837 LINC00846Q9NV44 126 aa5.7□□□□□ -1.5
CCM2-204ENST00000470837 KRTAP17-1Q9BYP8 105 aa5.69□□□□□ -1.5
CCM2-204ENST00000470837 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
CCM2-204ENST00000470837 Q6ZVQ6 151 aa5.67□□□□□ -1.5
CCM2-204ENST00000470837 BPY2O14599 106 aa5.66□□□□□ -1.5
CCM2-204ENST00000470837 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
CCM2-204ENST00000470837 LINC00643Q86TS7 51 aa5.66□□□□□ -1.5
CCM2-204ENST00000470837 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
CCM2-204ENST00000470837 J3QL48 77 aa5.65□□□□□ -1.5
CCM2-204ENST00000470837 ATP5EP2Q5VTU8 51 aa5.65□□□□□ -1.5
CCM2-204ENST00000470837 Q5XG85 94 aa5.65□□□□□ -1.5
CCM2-204ENST00000470837 KRTAP29-1A8MX34 341 aaPredicted RBP5.64□□□□□ -1.51
CCM2-204ENST00000470837 J3KT08 172 aa5.64□□□□□ -1.51
CCM2-204ENST00000470837 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
CCM2-204ENST00000470837 ASB16-AS1Q495Z4 193 aa5.63□□□□□ -1.51
CCM2-204ENST00000470837 NDUFB1O75438 58 aa5.62□□□□□ -1.51
CCM2-204ENST00000470837 CDIP1Q9H305 208 aa5.62□□□□□ -1.51
CCM2-204ENST00000470837 IGKV4-1P06312 121 aa5.61□□□□□ -1.51
CCM2-204ENST00000470837 CXCL6P80162 114 aa5.61□□□□□ -1.51
CCM2-204ENST00000470837 FLG2Q5D862 2391 aaPredicted RBP5.61□□□□□ -1.51
CCM2-204ENST00000470837 IGKV3D-7A0A0C4DH55 119 aa5.6□□□□□ -1.51
CCM2-204ENST00000470837 DEFB116Q30KQ4 102 aa5.6□□□□□ -1.51
CCM2-204ENST00000470837 LINC00472Q9H8W2 130 aa5.6□□□□□ -1.51
CCM2-204ENST00000470837 MT1HL1P0DM35 61 aa5.58□□□□□ -1.52
CCM2-204ENST00000470837 HIST1H4AP62805 103 aaKnown RBP5.58□□□□□ -1.52
CCM2-204ENST00000470837 HERC2O95714 4834 aa5.57□□□□□ -1.52
CCM2-204ENST00000470837 C1orf195Q5TG92 126 aa5.57□□□□□ -1.52
CCM2-204ENST00000470837 A8MWP4 228 aa5.56□□□□□ -1.52
CCM2-204ENST00000470837 MT-ATP8P03928 68 aa5.55□□□□□ -1.52
CCM2-204ENST00000470837 Q96NJ1 140 aa5.55□□□□□ -1.52
CCM2-204ENST00000470837 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
CCM2-204ENST00000470837 IMUPQ9GZP8 106 aa5.54□□□□□ -1.52
CCM2-204ENST00000470837 IGHV6-1A0A0B4J1U7 121 aa5.53□□□□□ -1.52
CCM2-204ENST00000470837 DSCR10P59022 87 aa5.53□□□□□ -1.52
CCM2-204ENST00000470837 FP248Q71RG6 208 aaPredicted RBP5.53□□□□□ -1.52
CCM2-204ENST00000470837 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
CCM2-204ENST00000470837 RETNLBQ9BQ08 111 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms