RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 ZNF861PO60384 105 aa5.03□□□□□ -1.6
GTF3A-206ENST00000470606 HSPG2P98160 4391 aa5.03□□□□□ -1.6
GTF3A-206ENST00000470606 A0A0G2JQZ4 141 aa5.03□□□□□ -1.6
GTF3A-206ENST00000470606 K7ERU9 68 aa5.03□□□□□ -1.6
GTF3A-206ENST00000470606 PCP4P48539 62 aa5.03□□□□□ -1.6
GTF3A-206ENST00000470606 SMR3BP02814 79 aaPredicted RBP5.02□□□□□ -1.61
GTF3A-206ENST00000470606 GAGE2AQ6NT46 116 aa5.02□□□□□ -1.61
GTF3A-206ENST00000470606 ANAPC11Q9NYG5 84 aa5.02□□□□□ -1.61
GTF3A-206ENST00000470606 TRBV7-4A0A0J9YYF1 115 aa5.01□□□□□ -1.61
GTF3A-206ENST00000470606 JMJD7-PLA2G4BH0Y9G9 81 aa5.01□□□□□ -1.61
GTF3A-206ENST00000470606 SPRR1BP22528 89 aa5.01□□□□□ -1.61
GTF3A-206ENST00000470606 RBM3P98179 157 aaKnown RBP5.01□□□□□ -1.61
GTF3A-206ENST00000470606 Q6ZQT0 140 aa5.01□□□□□ -1.61
GTF3A-206ENST00000470606 H3BQ85 93 aa5.01□□□□□ -1.61
GTF3A-206ENST00000470606 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
GTF3A-206ENST00000470606 C4orf48Q5BLP8 95 aa5.01□□□□□ -1.61
GTF3A-206ENST00000470606 SPRR4Q96PI1 79 aa5.01□□□□□ -1.61
GTF3A-206ENST00000470606 CDIP1Q9H305 208 aa5.01□□□□□ -1.61
GTF3A-206ENST00000470606 KIAA1109Q2LD37 5005 aa5□□□□□ -1.61
GTF3A-206ENST00000470606 RYR1P21817 5038 aa4.99□□□□□ -1.61
GTF3A-206ENST00000470606 LOC110117498A0A087WWA1 95 aa4.99□□□□□ -1.61
GTF3A-206ENST00000470606 CCKP06307 115 aa4.99□□□□□ -1.61
GTF3A-206ENST00000470606 LINC00483Q53H64 154 aa4.99□□□□□ -1.61
GTF3A-206ENST00000470606 J3QR89 54 aa4.98□□□□□ -1.61
GTF3A-206ENST00000470606 GHRHP01286 108 aa4.98□□□□□ -1.61
GTF3A-206ENST00000470606 LINC00846Q9NV44 126 aa4.97□□□□□ -1.61
GTF3A-206ENST00000470606 IGLV8-61A0A075B6I0 122 aa4.97□□□□□ -1.61
GTF3A-206ENST00000470606 FAM240AA0A1B0GVK7 77 aa4.97□□□□□ -1.61
GTF3A-206ENST00000470606 A0A1W2PNM2 257 aa4.97□□□□□ -1.61
GTF3A-206ENST00000470606 DSCR8Q96T75 97 aa4.97□□□□□ -1.61
GTF3A-206ENST00000470606 IGFL1Q6UW32 110 aa4.96□□□□□ -1.62
GTF3A-206ENST00000470606 KRTAP1-4P0C5Y4 121 aa4.95□□□□□ -1.62
GTF3A-206ENST00000470606 BIRC6Q9NR09 4857 aa4.95□□□□□ -1.62
GTF3A-206ENST00000470606 A0A087X002 238 aa4.95□□□□□ -1.62
GTF3A-206ENST00000470606 RPL37AP61513 92 aaKnown RBP4.95□□□□□ -1.62
GTF3A-206ENST00000470606 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
GTF3A-206ENST00000470606 IGLV9-49A0A0B4J1Y8 123 aa4.94□□□□□ -1.62
GTF3A-206ENST00000470606 VPS25Q9BRG1 176 aa4.94□□□□□ -1.62
GTF3A-206ENST00000470606 PKHD1L1Q86WI1 4243 aa4.93□□□□□ -1.62
GTF3A-206ENST00000470606 FLG2Q5D862 2391 aaPredicted RBP4.93□□□□□ -1.62
GTF3A-206ENST00000470606 PDE6GP18545 87 aa4.93□□□□□ -1.62
GTF3A-206ENST00000470606 ZNF706Q9Y5V0 76 aaPredicted RBP4.93□□□□□ -1.62
GTF3A-206ENST00000470606 F8WEM9 126 aa4.92□□□□□ -1.62
GTF3A-206ENST00000470606 CDK2AP2O75956 126 aa4.92□□□□□ -1.62
GTF3A-206ENST00000470606 MT-ATP8P03928 68 aa4.92□□□□□ -1.62
GTF3A-206ENST00000470606 ACYP1P07311 99 aa4.92□□□□□ -1.62
GTF3A-206ENST00000470606 KRTAP13-2Q52LG2 175 aa4.92□□□□□ -1.62
GTF3A-206ENST00000470606 Q8NBF4 154 aa4.92□□□□□ -1.62
GTF3A-206ENST00000470606 MOBPQ13875 183 aa4.91□□□□□ -1.62
GTF3A-206ENST00000470606 LRP1Q07954 4544 aaKnown RBP4.9□□□□□ -1.62
GTF3A-206ENST00000470606 CRYGAP11844 174 aa4.9□□□□□ -1.62
GTF3A-206ENST00000470606 C9orf153Q5TBE3 101 aa4.89□□□□□ -1.63
GTF3A-206ENST00000470606 SPINK6Q6UWN8 80 aa4.89□□□□□ -1.63
GTF3A-206ENST00000470606 Q6JHZ5 121 aa4.89□□□□□ -1.63
GTF3A-206ENST00000470606 Q6ZVQ6 151 aa4.89□□□□□ -1.63
GTF3A-206ENST00000470606 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
GTF3A-206ENST00000470606 MYCBP2O75592 4640 aa4.88□□□□□ -1.63
GTF3A-206ENST00000470606 PLA2G1BP04054 148 aaKnown RBP4.87□□□□□ -1.63
GTF3A-206ENST00000470606 A0A087WSZ3 146 aa4.87□□□□□ -1.63
GTF3A-206ENST00000470606 FAM229BQ4G0N7 80 aa4.87□□□□□ -1.63
GTF3A-206ENST00000470606 Q5VSD8 79 aa4.87□□□□□ -1.63
GTF3A-206ENST00000470606 Q6Q795 121 aa4.87□□□□□ -1.63
GTF3A-206ENST00000470606 HRCT1Q6UXD1 115 aa4.87□□□□□ -1.63
GTF3A-206ENST00000470606 LINC00643Q86TS7 51 aa4.86□□□□□ -1.63
GTF3A-206ENST00000470606 SIGMAR1Q99720 223 aa4.86□□□□□ -1.63
GTF3A-206ENST00000470606 IGKV3D-7A0A0C4DH55 119 aa4.85□□□□□ -1.63
GTF3A-206ENST00000470606 TRBV7-7A0A0K0K1E9 115 aa4.85□□□□□ -1.63
GTF3A-206ENST00000470606 PRR26Q8N8Z3 221 aa4.85□□□□□ -1.63
GTF3A-206ENST00000470606 UBL5Q9BZL1 73 aa4.85□□□□□ -1.63
GTF3A-206ENST00000470606 TNXBP22105 4242 aa4.85□□□□□ -1.63
GTF3A-206ENST00000470606 A0A1B0GW54 56 aa4.84□□□□□ -1.64
GTF3A-206ENST00000470606 FAM229AH3BQW9 127 aa4.84□□□□□ -1.64
GTF3A-206ENST00000470606 SSBP3-AS1Q7Z2R9 100 aa4.84□□□□□ -1.64
GTF3A-206ENST00000470606 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.64
GTF3A-206ENST00000470606 NREPQ16612 68 aa4.83□□□□□ -1.64
GTF3A-206ENST00000470606 DEFB116Q30KQ4 102 aa4.83□□□□□ -1.64
GTF3A-206ENST00000470606 Q8N1X5 172 aa4.82□□□□□ -1.64
GTF3A-206ENST00000470606 Q96NJ1 140 aa4.82□□□□□ -1.64
GTF3A-206ENST00000470606 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
GTF3A-206ENST00000470606 Q8N9L7 120 aa4.82□□□□□ -1.64
GTF3A-206ENST00000470606 LINC00472Q9H8W2 130 aa4.82□□□□□ -1.64
GTF3A-206ENST00000470606 FAT3Q8TDW7 4589 aa4.81□□□□□ -1.64
GTF3A-206ENST00000470606 A0A087WVE0 104 aa4.81□□□□□ -1.64
GTF3A-206ENST00000470606 DSCR10P59022 87 aa4.81□□□□□ -1.64
GTF3A-206ENST00000470606 TYMSOSQ8TAI1 123 aa4.8□□□□□ -1.64
GTF3A-206ENST00000470606 J3QL48 77 aa4.8□□□□□ -1.64
GTF3A-206ENST00000470606 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
GTF3A-206ENST00000470606 CXCL6P80162 114 aa4.79□□□□□ -1.64
GTF3A-206ENST00000470606 CD164Q04900 197 aa4.79□□□□□ -1.64
GTF3A-206ENST00000470606 ABCA13Q86UQ4 5058 aa4.79□□□□□ -1.64
GTF3A-206ENST00000470606 BPY2O14599 106 aa4.78□□□□□ -1.64
GTF3A-206ENST00000470606 ATP5EP2Q5VTU8 51 aa4.78□□□□□ -1.64
GTF3A-206ENST00000470606 K7EQZ3 153 aa4.77□□□□□ -1.65
GTF3A-206ENST00000470606 IGKV4-1P06312 121 aa4.77□□□□□ -1.65
GTF3A-206ENST00000470606 IMUPQ9GZP8 106 aa4.77□□□□□ -1.65
GTF3A-206ENST00000470606 HERC2O95714 4834 aa4.77□□□□□ -1.65
GTF3A-206ENST00000470606 HIST1H4AP62805 103 aaKnown RBP4.76□□□□□ -1.65
GTF3A-206ENST00000470606 KRTAP10-8P60410 259 aa4.76□□□□□ -1.65
GTF3A-206ENST00000470606 LINC00304Q8N9R0 145 aa4.75□□□□□ -1.65
GTF3A-206ENST00000470606 Q5XG85 94 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms