RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 LEPROTL1O95214 131 aa4.61□□□□□ -1.67
CCDC171-204ENST00000470191 IGKCP01834 107 aa4.61□□□□□ -1.67
CCDC171-204ENST00000470191 FAM236CP0DP71 79 aa4.61□□□□□ -1.67
CCDC171-204ENST00000470191 FABP4P15090 132 aa4.61□□□□□ -1.67
CCDC171-204ENST00000470191 SPANXDQ9BXN6 97 aa4.61□□□□□ -1.67
CCDC171-204ENST00000470191 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
CCDC171-204ENST00000470191 C10orf91Q5T1B1 145 aa4.6□□□□□ -1.67
CCDC171-204ENST00000470191 LINC00518Q8N0U6 118 aa4.6□□□□□ -1.67
CCDC171-204ENST00000470191 IGLV5-48A0A075B6I7 105 aa4.59□□□□□ -1.67
CCDC171-204ENST00000470191 LITAFQ99732 161 aa4.59□□□□□ -1.67
CCDC171-204ENST00000470191 F8WEM9 126 aa4.58□□□□□ -1.68
CCDC171-204ENST00000470191 SERF1AO75920 110 aa4.58□□□□□ -1.68
CCDC171-204ENST00000470191 LINC00846Q9NV44 126 aa4.58□□□□□ -1.68
CCDC171-204ENST00000470191 A0A1B0GWB2 263 aa4.57□□□□□ -1.68
CCDC171-204ENST00000470191 C20orf166-AS1Q96NR2 134 aa4.57□□□□□ -1.68
CCDC171-204ENST00000470191 A6NDN8 102 aa4.56□□□□□ -1.68
CCDC171-204ENST00000470191 E9PLD3 99 aa4.56□□□□□ -1.68
CCDC171-204ENST00000470191 TRBV7-6A0A0J9YX20 115 aa4.55□□□□□ -1.68
CCDC171-204ENST00000470191 TRBV7-7A0A0K0K1E9 115 aa4.55□□□□□ -1.68
CCDC171-204ENST00000470191 IGFL1Q6UW32 110 aa4.55□□□□□ -1.68
CCDC171-204ENST00000470191 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
CCDC171-204ENST00000470191 HSPB8Q9UJY1 196 aa4.55□□□□□ -1.68
CCDC171-204ENST00000470191 ZNF815PA8K554 130 aa4.54□□□□□ -1.68
CCDC171-204ENST00000470191 TIMM17BO60830 172 aa4.54□□□□□ -1.68
CCDC171-204ENST00000470191 APOC3P02656 99 aa4.54□□□□□ -1.68
CCDC171-204ENST00000470191 KRTAP19-6Q3LI70 58 aa4.54□□□□□ -1.68
CCDC171-204ENST00000470191 LST1O00453 97 aa4.53□□□□□ -1.68
CCDC171-204ENST00000470191 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
CCDC171-204ENST00000470191 SLC7A5P1Q8MH63 180 aa4.53□□□□□ -1.68
CCDC171-204ENST00000470191 A8MUU9 505 aa4.52□□□□□ -1.69
CCDC171-204ENST00000470191 CLEC2BQ92478 149 aa4.52□□□□□ -1.69
CCDC171-204ENST00000470191 NHP2Q9NX24 153 aaKnown RBP4.52□□□□□ -1.69
CCDC171-204ENST00000470191 SNAPINO95295 136 aa4.51□□□□□ -1.69
CCDC171-204ENST00000470191 TRGC2P03986 189 aa4.51□□□□□ -1.69
CCDC171-204ENST00000470191 Q6JHZ5 121 aa4.51□□□□□ -1.69
CCDC171-204ENST00000470191 YPEL4Q96NS1 127 aa4.51□□□□□ -1.69
CCDC171-204ENST00000470191 DSCR10P59022 87 aa4.5□□□□□ -1.69
CCDC171-204ENST00000470191 SMIM11BQ8TCY0 68 aa4.5□□□□□ -1.69
CCDC171-204ENST00000470191 RBM12B-AS1Q9P1G2 102 aa4.5□□□□□ -1.69
CCDC171-204ENST00000470191 A4D1N5 150 aa4.49□□□□□ -1.69
CCDC171-204ENST00000470191 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
CCDC171-204ENST00000470191 OCIAD2Q56VL3 154 aa4.49□□□□□ -1.69
CCDC171-204ENST00000470191 Q6ZQY7 126 aa4.49□□□□□ -1.69
CCDC171-204ENST00000470191 TRAV13-2A0A0B4J235 113 aa4.48□□□□□ -1.69
CCDC171-204ENST00000470191 SCGB1D4Q6XE38 83 aa4.48□□□□□ -1.69
CCDC171-204ENST00000470191 SVBPQ8N300 66 aa4.48□□□□□ -1.69
CCDC171-204ENST00000470191 H3BUT2 72 aa4.47□□□□□ -1.69
CCDC171-204ENST00000470191 NDUFA5Q16718 116 aa4.47□□□□□ -1.69
CCDC171-204ENST00000470191 MUSTN1Q8IVN3 82 aa4.47□□□□□ -1.69
CCDC171-204ENST00000470191 HRES1P13985 223 aa4.46□□□□□ -1.7
CCDC171-204ENST00000470191 LINC00575Q6W349 94 aa4.46□□□□□ -1.7
CCDC171-204ENST00000470191 hADV29S1A0JD25 119 aa4.45□□□□□ -1.7
CCDC171-204ENST00000470191 SYS1-DBNDD2H3BUS1 97 aa4.45□□□□□ -1.7
CCDC171-204ENST00000470191 VAMP3Q15836 100 aa4.45□□□□□ -1.7
CCDC171-204ENST00000470191 COPS9Q8WXC6 57 aa4.44□□□□□ -1.7
CCDC171-204ENST00000470191 SNHG12Q9BXW3 62 aa4.44□□□□□ -1.7
CCDC171-204ENST00000470191 IFITM1P13164 125 aa4.43□□□□□ -1.7
CCDC171-204ENST00000470191 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
CCDC171-204ENST00000470191 MPLKIPQ8TAP9 179 aa4.43□□□□□ -1.7
CCDC171-204ENST00000470191 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
CCDC171-204ENST00000470191 SS18L2Q9UHA2 77 aa4.43□□□□□ -1.7
CCDC171-204ENST00000470191 LINC01545Q5VT33 79 aa4.42□□□□□ -1.7
CCDC171-204ENST00000470191 Q6ZVH6 145 aa4.42□□□□□ -1.7
CCDC171-204ENST00000470191 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
CCDC171-204ENST00000470191 A0A087WSZ3 146 aa4.4□□□□□ -1.71
CCDC171-204ENST00000470191 LINC00313P59037 77 aa4.4□□□□□ -1.71
CCDC171-204ENST00000470191 COLCA2A8K830 154 aa4.39□□□□□ -1.71
CCDC171-204ENST00000470191 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
CCDC171-204ENST00000470191 PET117Q6UWS5 81 aa4.39□□□□□ -1.71
CCDC171-204ENST00000470191 MTURNQ8N3F0 131 aa4.39□□□□□ -1.71
CCDC171-204ENST00000470191 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.38□□□□□ -1.71
CCDC171-204ENST00000470191 TEN1Q86WV5 123 aa4.38□□□□□ -1.71
CCDC171-204ENST00000470191 ATOH7Q8N100 152 aa4.38□□□□□ -1.71
CCDC171-204ENST00000470191 SCGB1D1O95968 90 aa4.37□□□□□ -1.71
CCDC171-204ENST00000470191 C3orf79P0CE67 100 aa4.37□□□□□ -1.71
CCDC171-204ENST00000470191 KRTDAPP60985 99 aa4.37□□□□□ -1.71
CCDC171-204ENST00000470191 A8MWP4 228 aa4.36□□□□□ -1.71
CCDC171-204ENST00000470191 IGKV4-1P06312 121 aa4.36□□□□□ -1.71
CCDC171-204ENST00000470191 PCP4P48539 62 aa4.36□□□□□ -1.71
CCDC171-204ENST00000470191 DEFB116Q30KQ4 102 aa4.35□□□□□ -1.71
CCDC171-204ENST00000470191 PPDPFLQ8WWR9 84 aa4.35□□□□□ -1.71
CCDC171-204ENST00000470191 C12orf57Q99622 126 aa4.35□□□□□ -1.71
CCDC171-204ENST00000470191 NEBP20929 6669 aa4.33□□□□□ -1.72
CCDC171-204ENST00000470191 IGHV6-1A0A0B4J1U7 121 aa4.33□□□□□ -1.72
CCDC171-204ENST00000470191 NDUFV3P56181 108 aaKnown RBP4.33□□□□□ -1.72
CCDC171-204ENST00000470191 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
CCDC171-204ENST00000470191 H3BMG7 143 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST1H2BKO60814 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST1H2BJP06899 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST1H2BOP23527 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST1H2BBP33778 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST1H2BDP58876 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST1H2BCP62807 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST2H2BEQ16778 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.31□□□□□ -1.72
CCDC171-204ENST00000470191 BVES-AS1Q5T3Y7 98 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST1H2BHQ93079 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST1H2BNQ99877 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 HIST1H2BMQ99879 126 aa4.31□□□□□ -1.72
CCDC171-204ENST00000470191 A0A1B0GV72 72 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms