RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 KRTAP2-1Q9BYU5 128 aa0.45□□□□□ -2.34
VPS8-220ENST00000469713 NESP48681 1621 aa0.45□□□□□ -2.34
VPS8-220ENST00000469713 KMT2AQ03164 3969 aa0.45□□□□□ -2.34
VPS8-220ENST00000469713 COL14A1Q05707 1796 aaKnown RBP0.45□□□□□ -2.34
VPS8-220ENST00000469713 MYO5CQ9NQX4 1742 aa0.44□□□□□ -2.34
VPS8-220ENST00000469713 UBR3Q6ZT12 1888 aa0.44□□□□□ -2.34
VPS8-220ENST00000469713 ATP7BP35670 1465 aa0.44□□□□□ -2.34
VPS8-220ENST00000469713 A0A1B0GUT8 65 aa0.44□□□□□ -2.34
VPS8-220ENST00000469713 C18orf32Q8TCD1 76 aa0.44□□□□□ -2.34
VPS8-220ENST00000469713 IQGAP3Q86VI3 1631 aa0.44□□□□□ -2.34
VPS8-220ENST00000469713 CICQ96RK0 1608 aaPredicted RBP0.44□□□□□ -2.34
VPS8-220ENST00000469713 ARFGEF2Q9Y6D5 1785 aa0.44□□□□□ -2.34
VPS8-220ENST00000469713 PIK3C2BO00750 1634 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 SCN11AQ9UI33 1791 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 TRAV21A0A0B4J279 112 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 DEFB121Q5J5C9 76 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 Q8IZM0 81 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 ABCA8O94911 1581 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 CFAP74Q9C0B2 1584 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 VPS13CQ709C8 3753 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 POLR1AO95602 1720 aaPredicted RBP0.43□□□□□ -2.34
VPS8-220ENST00000469713 ACACAQ13085 2346 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 LRRC7Q96NW7 1537 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 TSC2P49815 1807 aa0.43□□□□□ -2.34
VPS8-220ENST00000469713 BIVM-ERCC5R4GMW8 1640 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 LRRC37AA6NMS7 1700 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 QSER1Q2KHR3 1735 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 DOT1LQ8TEK3 1739 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 DNMBPQ6XZF7 1577 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 CEP170BQ9Y4F5 1589 aaPredicted RBP0.42□□□□□ -2.34
VPS8-220ENST00000469713 K7EQZ3 153 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 CFDP00746 253 aaPredicted RBP0.42□□□□□ -2.34
VPS8-220ENST00000469713 SMIM13P0DJ93 91 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 PIGYQ3MUY2 71 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 GAFA1Q96PS6 74 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 USP32Q8NFA0 1604 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 PTPN23Q9H3S7 1636 aa0.42□□□□□ -2.34
VPS8-220ENST00000469713 CCDC88BA6NC98 1476 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 NCOA2Q15596 1464 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 HRNRQ86YZ3 2850 aaPredicted RBP0.41□□□□□ -2.34
VPS8-220ENST00000469713 ANKARQ7Z5J8 1434 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 A0A087WXM4 84 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 IFI6P09912 130 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 DEFA5Q01523 94 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 WFDC9Q8NEX5 89 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 SMCO4Q9NRQ5 59 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 UGGT2Q9NYU1 1516 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 LRRC9Q6ZRR7 1453 aa0.41□□□□□ -2.34
VPS8-220ENST00000469713 AHCTF1Q8WYP5 2266 aa0.4□□□□□ -2.34
VPS8-220ENST00000469713 ABCC1P33527 1531 aa0.4□□□□□ -2.35
VPS8-220ENST00000469713 COX7BP24311 80 aa0.4□□□□□ -2.35
VPS8-220ENST00000469713 TIAM2Q8IVF5 1701 aa0.4□□□□□ -2.35
VPS8-220ENST00000469713 FAT3Q8TDW7 4589 aa0.39□□□□□ -2.35
VPS8-220ENST00000469713 LAMA5O15230 3695 aa0.39□□□□□ -2.35
VPS8-220ENST00000469713 CSMD3Q7Z407 3707 aa0.39□□□□□ -2.35
VPS8-220ENST00000469713 PDCD5O14737 125 aa0.39□□□□□ -2.35
VPS8-220ENST00000469713 SPRR1BP22528 89 aa0.39□□□□□ -2.35
VPS8-220ENST00000469713 SPRR1AP35321 89 aa0.39□□□□□ -2.35
VPS8-220ENST00000469713 Q5BKY6 102 aa0.39□□□□□ -2.35
VPS8-220ENST00000469713 ZC3H13Q5T200 1668 aaKnown RBP0.39□□□□□ -2.35
VPS8-220ENST00000469713 BCORQ6W2J9 1755 aa0.39□□□□□ -2.35
VPS8-220ENST00000469713 DNAH7Q8WXX0 4024 aa0.39□□□□□ -2.35
VPS8-220ENST00000469713 URB2Q14146 1524 aaKnown RBP0.38□□□□□ -2.35
VPS8-220ENST00000469713 ITSN1Q15811 1721 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 PLCE1Q9P212 2302 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 URB1O60287 2271 aaKnown RBP0.38□□□□□ -2.35
VPS8-220ENST00000469713 PKDREJQ9NTG1 2253 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 CFAP43Q8NDM7 1665 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 NKTRP30414 1462 aaKnown RBP0.38□□□□□ -2.35
VPS8-220ENST00000469713 SPTY2D1-AS1A0A0U1RR47 76 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 CPSF4LA6NMK7 179 aaKnown RBP0.38□□□□□ -2.35
VPS8-220ENST00000469713 UMAD1C9J7I0 102 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 I3L3M4 83 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 COX6B1P14854 86 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 IFI27P40305 119 aaPredicted RBP0.38□□□□□ -2.35
VPS8-220ENST00000469713 KLK9Q2XQG4 91 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 USMG5Q96IX5 58 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 TNCP24821 2201 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 RICTORQ6R327 1708 aa0.38□□□□□ -2.35
VPS8-220ENST00000469713 ADAMTS12P58397 1594 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 DMDP11532 3685 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 H3BVH4 76 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 HMGA1P17096 107 aaKnown RBP0.37□□□□□ -2.35
VPS8-220ENST00000469713 LELP1Q5T871 98 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 ATP5EP2Q5VTU8 51 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 SPINK6Q6UWN8 80 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 APLNQ9ULZ1 77 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 HILPDAQ9Y5L2 63 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 WNK2Q9Y3S1 2297 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 PARP4Q9UKK3 1724 aaKnown RBP0.37□□□□□ -2.35
VPS8-220ENST00000469713 USF3Q68DE3 2245 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 MYCBP2O75592 4640 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 PLCH1Q4KWH8 1693 aa0.37□□□□□ -2.35
VPS8-220ENST00000469713 CD163L1Q9NR16 1453 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 PKHD1P08F94 4074 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 MADDQ8WXG6 1647 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 NDUFB1O75438 58 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 NREPQ16612 68 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 Q5VSD8 79 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms