RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 SMIM6P0DI80 62 aa9.28□□□□□ -0.92
TTC28-205ENST00000469670 LINC00518Q8N0U6 118 aa9.28□□□□□ -0.92
TTC28-205ENST00000469670 E9PLD3 99 aa9.27□□□□□ -0.93
TTC28-205ENST00000469670 PYY3Q5JQD4 70 aa9.27□□□□□ -0.93
TTC28-205ENST00000469670 HSPB8Q9UJY1 196 aa9.26□□□□□ -0.93
TTC28-205ENST00000469670 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
TTC28-205ENST00000469670 TIMM17BO60830 172 aa9.25□□□□□ -0.93
TTC28-205ENST00000469670 MT1FP04733 61 aa9.25□□□□□ -0.93
TTC28-205ENST00000469670 KRTDAPP60985 99 aa9.25□□□□□ -0.93
TTC28-205ENST00000469670 TRBV20-1A0A075B6N2 111 aa9.24□□□□□ -0.93
TTC28-205ENST00000469670 C3orf79P0CE67 100 aa9.24□□□□□ -0.93
TTC28-205ENST00000469670 C12orf57Q99622 126 aa9.24□□□□□ -0.93
TTC28-205ENST00000469670 KRTAP9-3Q9BYQ3 159 aa9.24□□□□□ -0.93
TTC28-205ENST00000469670 SCGB1D1O95968 90 aa9.22□□□□□ -0.93
TTC28-205ENST00000469670 SYS1-DBNDD2H3BUS1 97 aa9.2□□□□□ -0.94
TTC28-205ENST00000469670 PET117Q6UWS5 81 aa9.2□□□□□ -0.94
TTC28-205ENST00000469670 F8WEM9 126 aa9.19□□□□□ -0.94
TTC28-205ENST00000469670 KRTAP10-10P60014 251 aa9.19□□□□□ -0.94
TTC28-205ENST00000469670 Q96NJ1 140 aa9.19□□□□□ -0.94
TTC28-205ENST00000469670 TRBV7-7A0A0K0K1E9 115 aa9.18□□□□□ -0.94
TTC28-205ENST00000469670 LINC00846Q9NV44 126 aa9.17□□□□□ -0.94
TTC28-205ENST00000469670 NHP2Q9NX24 153 aaKnown RBP9.16□□□□□ -0.94
TTC28-205ENST00000469670 A4D1N5 150 aa9.15□□□□□ -0.94
TTC28-205ENST00000469670 ZNF815PA8K554 130 aa9.15□□□□□ -0.94
TTC28-205ENST00000469670 LINC01545Q5VT33 79 aa9.15□□□□□ -0.94
TTC28-205ENST00000469670 A6NDN8 102 aa9.14□□□□□ -0.95
TTC28-205ENST00000469670 C20orf166-AS1Q96NR2 134 aa9.14□□□□□ -0.95
TTC28-205ENST00000469670 Q6JHZ5 121 aa9.13□□□□□ -0.95
TTC28-205ENST00000469670 IGFL1Q6UW32 110 aa9.13□□□□□ -0.95
TTC28-205ENST00000469670 CLEC2BQ92478 149 aa9.13□□□□□ -0.95
TTC28-205ENST00000469670 FAM236DA0A1B0GTK5 79 aa9.11□□□□□ -0.95
TTC28-205ENST00000469670 A8MUU9 505 aa9.11□□□□□ -0.95
TTC28-205ENST00000469670 FAM236CP0DP71 79 aa9.11□□□□□ -0.95
TTC28-205ENST00000469670 KRTAP19-6Q3LI70 58 aa9.11□□□□□ -0.95
TTC28-205ENST00000469670 TTTY13Q9BZ97 58 aa9.11□□□□□ -0.95
TTC28-205ENST00000469670 ATOH7Q8N100 152 aa9.1□□□□□ -0.95
TTC28-205ENST00000469670 VAMP8Q9BV40 100 aa9.1□□□□□ -0.95
TTC28-205ENST00000469670 LST1O00453 97 aa9.09□□□□□ -0.95
TTC28-205ENST00000469670 PAM16Q9Y3D7 125 aa9.07□□□□□ -0.96
TTC28-205ENST00000469670 TRAV13-2A0A0B4J235 113 aa9.06□□□□□ -0.96
TTC28-205ENST00000469670 HSBP1L1C9JCN9 74 aa9.06□□□□□ -0.96
TTC28-205ENST00000469670 SMIM11BQ8TCY0 68 aa9.06□□□□□ -0.96
TTC28-205ENST00000469670 KRTAP6-3Q3LI67 103 aa9.05□□□□□ -0.96
TTC28-205ENST00000469670 SPATA45Q537H7 98 aa9.05□□□□□ -0.96
TTC28-205ENST00000469670 OCIAD2Q56VL3 154 aa9.05□□□□□ -0.96
TTC28-205ENST00000469670 COPS9Q8WXC6 57 aa9.05□□□□□ -0.96
TTC28-205ENST00000469670 TSTD3H0UI37 97 aa9.04□□□□□ -0.96
TTC28-205ENST00000469670 PCP4L1A6NKN8 68 aa9.03□□□□□ -0.96
TTC28-205ENST00000469670 IFITM1P13164 125 aa9.03□□□□□ -0.96
TTC28-205ENST00000469670 SCGB1D4Q6XE38 83 aa9.03□□□□□ -0.96
TTC28-205ENST00000469670 Q6ZQY7 126 aa9.02□□□□□ -0.97
TTC28-205ENST00000469670 LINC00575Q6W349 94 aa9.01□□□□□ -0.97
TTC28-205ENST00000469670 MUSTN1Q8IVN3 82 aa9□□□□□ -0.97
TTC28-205ENST00000469670 RBM12B-AS1Q9P1G2 102 aa9□□□□□ -0.97
TTC28-205ENST00000469670 KRTAP16-1A8MUX0 517 aa8.99□□□□□ -0.97
TTC28-205ENST00000469670 VAMP3Q15836 100 aa8.99□□□□□ -0.97
TTC28-205ENST00000469670 MPLKIPQ8TAP9 179 aa8.99□□□□□ -0.97
TTC28-205ENST00000469670 hADV29S1A0JD25 119 aa8.98□□□□□ -0.97
TTC28-205ENST00000469670 ANKRD39Q53RE8 183 aa8.98□□□□□ -0.97
TTC28-205ENST00000469670 Q6ZVH6 145 aa8.97□□□□□ -0.97
TTC28-205ENST00000469670 C14orf144Q96I85 54 aa8.97□□□□□ -0.97
TTC28-205ENST00000469670 UQCR10Q9UDW1 63 aa8.97□□□□□ -0.97
TTC28-205ENST00000469670 HRES1P13985 223 aa8.96□□□□□ -0.98
TTC28-205ENST00000469670 SS18L2Q9UHA2 77 aa8.96□□□□□ -0.98
TTC28-205ENST00000469670 COX8AP10176 69 aa8.95□□□□□ -0.98
TTC28-205ENST00000469670 DSCR10P59022 87 aa8.95□□□□□ -0.98
TTC28-205ENST00000469670 H3BUT2 72 aa8.93□□□□□ -0.98
TTC28-205ENST00000469670 DLEU1O43261 78 aa8.92□□□□□ -0.98
TTC28-205ENST00000469670 SNHG12Q9BXW3 62 aa8.91□□□□□ -0.98
TTC28-205ENST00000469670 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.9□□□□□ -0.98
TTC28-205ENST00000469670 PPDPFLQ8WWR9 84 aa8.89□□□□□ -0.99
TTC28-205ENST00000469670 NOTCH2NLQ7Z3S9 236 aa8.86□□□□□ -0.99
TTC28-205ENST00000469670 C2orf91Q6ZV80 131 aa8.85□□□□□ -0.99
TTC28-205ENST00000469670 TEN1Q86WV5 123 aa8.85□□□□□ -0.99
TTC28-205ENST00000469670 A0A087WSZ3 146 aa8.84□□□□□ -0.99
TTC28-205ENST00000469670 HIGD1BQ9P298 99 aa8.84□□□□□ -0.99
TTC28-205ENST00000469670 LINC00313P59037 77 aa8.83□□□□□ -1
TTC28-205ENST00000469670 NEBP20929 6669 aa8.82□□□□□ -1
TTC28-205ENST00000469670 M0R143 59 aa8.81□□□□□ -1
TTC28-205ENST00000469670 MTURNQ8N3F0 131 aa8.81□□□□□ -1
TTC28-205ENST00000469670 SIGMAR1Q99720 223 aa8.81□□□□□ -1
TTC28-205ENST00000469670 HSD52Q0P140 79 aa8.78□□□□□ -1
TTC28-205ENST00000469670 A8MWP4 228 aa8.76□□□□□ -1.01
TTC28-205ENST00000469670 BVES-AS1Q5T3Y7 98 aa8.76□□□□□ -1.01
TTC28-205ENST00000469670 Q8N9P0 234 aaPredicted RBP8.76□□□□□ -1.01
TTC28-205ENST00000469670 BATFQ16520 125 aa8.74□□□□□ -1.01
TTC28-205ENST00000469670 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
TTC28-205ENST00000469670 IGKV4-1P06312 121 aa8.72□□□□□ -1.01
TTC28-205ENST00000469670 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
TTC28-205ENST00000469670 CEND1Q8N111 149 aa8.72□□□□□ -1.01
TTC28-205ENST00000469670 COL5A1-AS1Q5SY13 56 aa8.7□□□□□ -1.02
TTC28-205ENST00000469670 MUC12Q9UKN1 5478 aa8.68□□□□□ -1.02
TTC28-205ENST00000469670 KRTAP20-1Q3LI63 56 aa8.68□□□□□ -1.02
TTC28-205ENST00000469670 H3BMG7 143 aa8.67□□□□□ -1.02
TTC28-205ENST00000469670 FXYD2P54710 66 aa8.67□□□□□ -1.02
TTC28-205ENST00000469670 A0A1W2PNM2 257 aa8.66□□□□□ -1.02
TTC28-205ENST00000469670 TMEM238LA0A1B0GVL6 79 aa8.65□□□□□ -1.02
TTC28-205ENST00000469670 A6NJY4 79 aa8.65□□□□□ -1.02
TTC28-205ENST00000469670 SPINK7P58062 85 aa8.64□□□□□ -1.03
TTC28-205ENST00000469670 IGHV6-1A0A0B4J1U7 121 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms