RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 TRAV23DV6A0A075B6W5 121 aa6.67□□□□□ -1.34
COL5A1-207ENST00000469093 ZNF73O43830 326 aaPredicted RBP6.67□□□□□ -1.34
COL5A1-207ENST00000469093 IGLV8-61A0A075B6I0 122 aa6.65□□□□□ -1.34
COL5A1-207ENST00000469093 A0A0B4J2C4 111 aa6.65□□□□□ -1.34
COL5A1-207ENST00000469093 H7C2G1 150 aa6.64□□□□□ -1.35
COL5A1-207ENST00000469093 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
COL5A1-207ENST00000469093 FXYD2P54710 66 aa6.64□□□□□ -1.35
COL5A1-207ENST00000469093 Q1RN00 199 aa6.64□□□□□ -1.35
COL5A1-207ENST00000469093 HRCT1Q6UXD1 115 aa6.64□□□□□ -1.35
COL5A1-207ENST00000469093 NHP2Q9NX24 153 aaKnown RBP6.64□□□□□ -1.35
COL5A1-207ENST00000469093 C9orf92A6NGG3 77 aa6.63□□□□□ -1.35
COL5A1-207ENST00000469093 SPRR1BP22528 89 aa6.63□□□□□ -1.35
COL5A1-207ENST00000469093 CFC1P0CG37 223 aa6.62□□□□□ -1.35
COL5A1-207ENST00000469093 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
COL5A1-207ENST00000469093 VAMP3Q15836 100 aa6.62□□□□□ -1.35
COL5A1-207ENST00000469093 BVES-AS1Q5T3Y7 98 aa6.62□□□□□ -1.35
COL5A1-207ENST00000469093 LIMD2Q9BT23 127 aa6.62□□□□□ -1.35
COL5A1-207ENST00000469093 PRO1854Q9UHT4 67 aa6.62□□□□□ -1.35
COL5A1-207ENST00000469093 BATFQ16520 125 aa6.61□□□□□ -1.35
COL5A1-207ENST00000469093 C6orf99Q4VX62 202 aa6.61□□□□□ -1.35
COL5A1-207ENST00000469093 COX7BP24311 80 aa6.6□□□□□ -1.35
COL5A1-207ENST00000469093 SMIM11BQ8TCY0 68 aa6.6□□□□□ -1.35
COL5A1-207ENST00000469093 KRTAP10-6P60371 365 aaPredicted RBP6.59□□□□□ -1.35
COL5A1-207ENST00000469093 LAMTOR3Q9UHA4 124 aa6.59□□□□□ -1.35
COL5A1-207ENST00000469093 TRBV7-6A0A0J9YX20 115 aa6.58□□□□□ -1.36
COL5A1-207ENST00000469093 A0A1B0GWB2 263 aa6.58□□□□□ -1.36
COL5A1-207ENST00000469093 K7ERJ3 54 aa6.58□□□□□ -1.36
COL5A1-207ENST00000469093 PSMB2P49721 201 aa6.58□□□□□ -1.36
COL5A1-207ENST00000469093 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
COL5A1-207ENST00000469093 PCP4L1A6NKN8 68 aa6.57□□□□□ -1.36
COL5A1-207ENST00000469093 SNCGO76070 127 aa6.57□□□□□ -1.36
COL5A1-207ENST00000469093 COX6CP09669 75 aa6.56□□□□□ -1.36
COL5A1-207ENST00000469093 ELOF1P60002 83 aaKnown RBP6.56□□□□□ -1.36
COL5A1-207ENST00000469093 CD164Q04900 197 aa6.56□□□□□ -1.36
COL5A1-207ENST00000469093 H0YGX0 51 aa6.54□□□□□ -1.36
COL5A1-207ENST00000469093 Q5XG85 94 aa6.54□□□□□ -1.36
COL5A1-207ENST00000469093 DEFB105AQ8NG35 78 aa6.54□□□□□ -1.36
COL5A1-207ENST00000469093 M0R2T5 61 aa6.53□□□□□ -1.36
COL5A1-207ENST00000469093 C1orf195Q5TG92 126 aa6.53□□□□□ -1.36
COL5A1-207ENST00000469093 TEX49A0A1B0GTD5 131 aa6.52□□□□□ -1.37
COL5A1-207ENST00000469093 SCGB1C2P0DMR2 95 aa6.52□□□□□ -1.37
COL5A1-207ENST00000469093 SMIM29Q86T20 159 aa6.52□□□□□ -1.37
COL5A1-207ENST00000469093 A0A0G2JQZ4 141 aa6.51□□□□□ -1.37
COL5A1-207ENST00000469093 TRIAP1O43715 76 aa6.51□□□□□ -1.37
COL5A1-207ENST00000469093 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
COL5A1-207ENST00000469093 LYRM7Q5U5X0 104 aa6.51□□□□□ -1.37
COL5A1-207ENST00000469093 hADV29S1A0JD25 119 aa6.5□□□□□ -1.37
COL5A1-207ENST00000469093 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
COL5A1-207ENST00000469093 COX6B2Q6YFQ2 88 aa6.49□□□□□ -1.37
COL5A1-207ENST00000469093 DNAL4O96015 105 aa6.48□□□□□ -1.37
COL5A1-207ENST00000469093 GHRHP01286 108 aa6.48□□□□□ -1.37
COL5A1-207ENST00000469093 COL5A1-AS1Q5SY13 56 aa6.48□□□□□ -1.37
COL5A1-207ENST00000469093 SNHG12Q9BXW3 62 aa6.48□□□□□ -1.37
COL5A1-207ENST00000469093 IGLV5-48A0A075B6I7 105 aa6.47□□□□□ -1.37
COL5A1-207ENST00000469093 A0A1B0GX51 115 aa6.47□□□□□ -1.37
COL5A1-207ENST00000469093 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.46□□□□□ -1.38
COL5A1-207ENST00000469093 NAA38Q9BRA0 125 aaKnown RBP6.46□□□□□ -1.38
COL5A1-207ENST00000469093 C9orf118A6NHY6 69 aa6.45□□□□□ -1.38
COL5A1-207ENST00000469093 H3BUT2 72 aa6.45□□□□□ -1.38
COL5A1-207ENST00000469093 Q6ZQY7 126 aa6.45□□□□□ -1.38
COL5A1-207ENST00000469093 CLEC2BQ92478 149 aa6.45□□□□□ -1.38
COL5A1-207ENST00000469093 OCIAD2Q56VL3 154 aa6.44□□□□□ -1.38
COL5A1-207ENST00000469093 TAX1BP3O14907 124 aa6.43□□□□□ -1.38
COL5A1-207ENST00000469093 FABP2P12104 132 aa6.43□□□□□ -1.38
COL5A1-207ENST00000469093 ATXN8Q156A1 80 aa6.43□□□□□ -1.38
COL5A1-207ENST00000469093 FAM218AQ96MZ4 157 aa6.43□□□□□ -1.38
COL5A1-207ENST00000469093 F8WEM9 126 aa6.42□□□□□ -1.38
COL5A1-207ENST00000469093 H3BQ85 93 aa6.42□□□□□ -1.38
COL5A1-207ENST00000469093 PPDPFLQ8WWR9 84 aa6.42□□□□□ -1.38
COL5A1-207ENST00000469093 TRBV20-1A0A075B6N2 111 aa6.41□□□□□ -1.38
COL5A1-207ENST00000469093 TCL1BO95988 128 aa6.41□□□□□ -1.38
COL5A1-207ENST00000469093 TRACP01848 142 aa6.41□□□□□ -1.38
COL5A1-207ENST00000469093 ORMDL1Q9P0S3 153 aa6.41□□□□□ -1.38
COL5A1-207ENST00000469093 A0A1W2PPM0 123 aa6.4□□□□□ -1.38
COL5A1-207ENST00000469093 LST1O00453 97 aa6.4□□□□□ -1.38
COL5A1-207ENST00000469093 FLGP20930 4061 aaPredicted RBP6.39□□□□□ -1.39
COL5A1-207ENST00000469093 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
COL5A1-207ENST00000469093 Q6Q795 121 aa6.37□□□□□ -1.39
COL5A1-207ENST00000469093 SPCS1Q9Y6A9 102 aa6.37□□□□□ -1.39
COL5A1-207ENST00000469093 TMEM256-PLSCR3K7ERE1 68 aa6.36□□□□□ -1.39
COL5A1-207ENST00000469093 ATP11AUNQ6ZP68 121 aa6.35□□□□□ -1.39
COL5A1-207ENST00000469093 C9JAW5 83 aa6.34□□□□□ -1.39
COL5A1-207ENST00000469093 BAALC-AS2P0C853 105 aa6.34□□□□□ -1.39
COL5A1-207ENST00000469093 TRBV7-7A0A0K0K1E9 115 aa6.33□□□□□ -1.4
COL5A1-207ENST00000469093 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
COL5A1-207ENST00000469093 NDUFV3P56181 108 aaKnown RBP6.33□□□□□ -1.4
COL5A1-207ENST00000469093 GTF2H5Q6ZYL4 71 aa6.33□□□□□ -1.4
COL5A1-207ENST00000469093 Q75L30 129 aa6.33□□□□□ -1.4
COL5A1-207ENST00000469093 OBSCN-AS1Q96MR7 158 aa6.33□□□□□ -1.4
COL5A1-207ENST00000469093 UBE2V1Q13404 147 aa6.32□□□□□ -1.4
COL5A1-207ENST00000469093 Q6JHZ5 121 aa6.32□□□□□ -1.4
COL5A1-207ENST00000469093 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
COL5A1-207ENST00000469093 H3BMG7 143 aa6.31□□□□□ -1.4
COL5A1-207ENST00000469093 IGFL1Q6UW32 110 aa6.31□□□□□ -1.4
COL5A1-207ENST00000469093 K7EP34 96 aa6.3□□□□□ -1.4
COL5A1-207ENST00000469093 ANKRD29Q8N6D5 301 aa6.3□□□□□ -1.4
COL5A1-207ENST00000469093 H3BT86 120 aa6.29□□□□□ -1.4
COL5A1-207ENST00000469093 A0A1B0GV72 72 aa6.28□□□□□ -1.4
COL5A1-207ENST00000469093 Q96NJ1 140 aa6.27□□□□□ -1.41
COL5A1-207ENST00000469093 JMJD7-PLA2G4BH0Y9G9 81 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms