RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 A0A1W2PNN7 141 aa8.99□□□□□ -0.97
COL27A1-203ENST00000468565 PLA2G2DQ9UNK4 145 aa8.99□□□□□ -0.97
COL27A1-203ENST00000468565 HIST1H4AP62805 103 aaKnown RBP8.99□□□□□ -0.97
COL27A1-203ENST00000468565 XAGE1AQ9HD64 81 aa8.98□□□□□ -0.97
COL27A1-203ENST00000468565 NDUFC2-KCTD14E9PQ53 114 aa8.97□□□□□ -0.97
COL27A1-203ENST00000468565 TMEM256-PLSCR3K7ERE1 68 aa8.97□□□□□ -0.97
COL27A1-203ENST00000468565 LINC00575Q6W349 94 aa8.97□□□□□ -0.97
COL27A1-203ENST00000468565 Q6ZRP5 223 aa8.97□□□□□ -0.97
COL27A1-203ENST00000468565 C14orf132Q9NPU4 83 aa8.97□□□□□ -0.97
COL27A1-203ENST00000468565 JMJD7-PLA2G4BH0Y9G9 81 aa8.95□□□□□ -0.98
COL27A1-203ENST00000468565 TRAV23DV6A0A075B6W5 121 aa8.95□□□□□ -0.98
COL27A1-203ENST00000468565 TRBV10-3A0A0K0K1G6 114 aa8.95□□□□□ -0.98
COL27A1-203ENST00000468565 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
COL27A1-203ENST00000468565 C9orf129Q5T035 196 aaKnown RBP8.95□□□□□ -0.98
COL27A1-203ENST00000468565 DIRC1Q969H9 104 aa8.95□□□□□ -0.98
COL27A1-203ENST00000468565 M0R378 163 aa8.93□□□□□ -0.98
COL27A1-203ENST00000468565 VPREB1P12018 145 aa8.93□□□□□ -0.98
COL27A1-203ENST00000468565 SPINK6Q6UWN8 80 aa8.93□□□□□ -0.98
COL27A1-203ENST00000468565 H3BQ85 93 aa8.93□□□□□ -0.98
COL27A1-203ENST00000468565 PHF5AQ7RTV0 110 aaKnown RBP8.93□□□□□ -0.98
COL27A1-203ENST00000468565 SERP2Q8N6R1 65 aa8.93□□□□□ -0.98
COL27A1-203ENST00000468565 SMCR5Q8TEV8 140 aa8.93□□□□□ -0.98
COL27A1-203ENST00000468565 MT1HL1P0DM35 61 aa8.92□□□□□ -0.98
COL27A1-203ENST00000468565 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
COL27A1-203ENST00000468565 TRBV7-6A0A0J9YX20 115 aa8.91□□□□□ -0.98
COL27A1-203ENST00000468565 FAM168BA1KXE4 195 aa8.91□□□□□ -0.98
COL27A1-203ENST00000468565 ZNF73O43830 326 aaPredicted RBP8.91□□□□□ -0.98
COL27A1-203ENST00000468565 PSORS1C2Q9UIG4 136 aa8.91□□□□□ -0.98
COL27A1-203ENST00000468565 CCKP06307 115 aa8.9□□□□□ -0.98
COL27A1-203ENST00000468565 COX7BP24311 80 aa8.9□□□□□ -0.98
COL27A1-203ENST00000468565 PRO0628Q9UI54 55 aa8.9□□□□□ -0.98
COL27A1-203ENST00000468565 TNXBP22105 4242 aa8.89□□□□□ -0.99
COL27A1-203ENST00000468565 REG3GQ6UW15 175 aa8.88□□□□□ -0.99
COL27A1-203ENST00000468565 KRTAP7-1Q8IUC3 87 aa8.88□□□□□ -0.99
COL27A1-203ENST00000468565 Q6JHZ5 121 aa8.88□□□□□ -0.99
COL27A1-203ENST00000468565 ELOF1P60002 83 aaKnown RBP8.87□□□□□ -0.99
COL27A1-203ENST00000468565 C1orf137Q5JT78 98 aa8.87□□□□□ -0.99
COL27A1-203ENST00000468565 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.86□□□□□ -0.99
COL27A1-203ENST00000468565 Q6ZQY7 126 aa8.86□□□□□ -0.99
COL27A1-203ENST00000468565 LINC00846Q9NV44 126 aa8.86□□□□□ -0.99
COL27A1-203ENST00000468565 NKAPP1Q8N9T2 125 aa8.85□□□□□ -0.99
COL27A1-203ENST00000468565 LAMTOR3Q9UHA4 124 aa8.85□□□□□ -0.99
COL27A1-203ENST00000468565 RBM3P98179 157 aaKnown RBP8.84□□□□□ -0.99
COL27A1-203ENST00000468565 Q5XG85 94 aa8.84□□□□□ -0.99
COL27A1-203ENST00000468565 KRTAP11-1Q8IUC1 163 aa8.84□□□□□ -0.99
COL27A1-203ENST00000468565 HMCN2Q8NDA2 5059 aa8.84□□□□□ -0.99
COL27A1-203ENST00000468565 IGLV7-43P04211 117 aa8.84□□□□□ -1
COL27A1-203ENST00000468565 UBE2BP63146 152 aa8.83□□□□□ -1
COL27A1-203ENST00000468565 LOC110117498A0A087WWA1 95 aa8.82□□□□□ -1
COL27A1-203ENST00000468565 ATP5EP2Q5VTU8 51 aa8.82□□□□□ -1
COL27A1-203ENST00000468565 HRCT1Q6UXD1 115 aa8.82□□□□□ -1
COL27A1-203ENST00000468565 BCE1O60756 84 aa8.81□□□□□ -1
COL27A1-203ENST00000468565 PDE6GP18545 87 aa8.8□□□□□ -1
COL27A1-203ENST00000468565 KRTAP10-8P60410 259 aa8.8□□□□□ -1
COL27A1-203ENST00000468565 C4orf26Q17RF5 130 aa8.8□□□□□ -1
COL27A1-203ENST00000468565 SERP1Q9Y6X1 66 aa8.8□□□□□ -1
COL27A1-203ENST00000468565 Q6ZQT0 140 aa8.8□□□□□ -1
COL27A1-203ENST00000468565 DSCR8Q96T75 97 aa8.8□□□□□ -1
COL27A1-203ENST00000468565 KCNQ1DNQ9H478 68 aa8.8□□□□□ -1
COL27A1-203ENST00000468565 IGLV5-37A0A075B6J1 123 aa8.78□□□□□ -1
COL27A1-203ENST00000468565 IGKV3D-7A0A0C4DH55 119 aa8.78□□□□□ -1
COL27A1-203ENST00000468565 H0Y9J4 135 aa8.77□□□□□ -1.01
COL27A1-203ENST00000468565 UBL5Q9BZL1 73 aa8.77□□□□□ -1.01
COL27A1-203ENST00000468565 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
COL27A1-203ENST00000468565 PRYO14603 147 aa8.76□□□□□ -1.01
COL27A1-203ENST00000468565 FAM236DA0A1B0GTK5 79 aa8.75□□□□□ -1.01
COL27A1-203ENST00000468565 FAM236CP0DP71 79 aa8.75□□□□□ -1.01
COL27A1-203ENST00000468565 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
COL27A1-203ENST00000468565 ATP5EP56381 51 aaPredicted RBP8.72□□□□□ -1.01
COL27A1-203ENST00000468565 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
COL27A1-203ENST00000468565 SMIM26A0A096LP01 95 aa8.72□□□□□ -1.01
COL27A1-203ENST00000468565 TRBV7-4A0A0J9YYF1 115 aa8.72□□□□□ -1.01
COL27A1-203ENST00000468565 ZNF861PO60384 105 aa8.72□□□□□ -1.01
COL27A1-203ENST00000468565 ETDCA0A1B0GVM5 59 aa8.7□□□□□ -1.02
COL27A1-203ENST00000468565 RPL37AP8A6NKH3 93 aa8.7□□□□□ -1.02
COL27A1-203ENST00000468565 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
COL27A1-203ENST00000468565 Q6ZRX8 168 aa8.7□□□□□ -1.02
COL27A1-203ENST00000468565 CYSTM1Q9H1C7 97 aa8.7□□□□□ -1.02
COL27A1-203ENST00000468565 SPRR1AP35321 89 aa8.69□□□□□ -1.02
COL27A1-203ENST00000468565 V9GYY9 64 aa8.69□□□□□ -1.02
COL27A1-203ENST00000468565 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
COL27A1-203ENST00000468565 PRR26Q8N8Z3 221 aa8.68□□□□□ -1.02
COL27A1-203ENST00000468565 NDUFC1O43677 76 aa8.67□□□□□ -1.02
COL27A1-203ENST00000468565 Q6ZVQ6 151 aa8.66□□□□□ -1.02
COL27A1-203ENST00000468565 A0A087WVE0 104 aa8.66□□□□□ -1.02
COL27A1-203ENST00000468565 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
COL27A1-203ENST00000468565 SEC61GP60059 68 aa8.65□□□□□ -1.02
COL27A1-203ENST00000468565 Q8N377 158 aa8.64□□□□□ -1.03
COL27A1-203ENST00000468565 TRAV7A0A075B6U4 112 aa8.64□□□□□ -1.03
COL27A1-203ENST00000468565 Q9BRP9 147 aa8.64□□□□□ -1.03
COL27A1-203ENST00000468565 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
COL27A1-203ENST00000468565 CXCL6P80162 114 aa8.62□□□□□ -1.03
COL27A1-203ENST00000468565 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
COL27A1-203ENST00000468565 KLKP1Q107X0 134 aa8.62□□□□□ -1.03
COL27A1-203ENST00000468565 FAM19A1Q7Z5A9 133 aa8.62□□□□□ -1.03
COL27A1-203ENST00000468565 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
COL27A1-203ENST00000468565 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
COL27A1-203ENST00000468565 UBE2AP49459 152 aa8.6□□□□□ -1.03
COL27A1-203ENST00000468565 UBR4Q5T4S7 5183 aa8.6□□□□□ -1.03
COL27A1-203ENST00000468565 LRP2P98164 4655 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms