RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 PDE6HQ13956 83 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 Q1T7F1 81 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 C9orf163Q8N9P6 203 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 TIMM21Q9BVV7 248 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 CYP4F30PQ9H0H9 118 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 FLNBO75369 2602 aaKnown RBP1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 TRGV1A0A0A0MS02 117 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 TRAV21A0A0B4J279 112 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 A0A0J9YY99 117 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 TRBV6-1A0A0K0K1D8 114 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 SPRR5A0A1B0GTR4 108 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 IGHV3-33P01772 117 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 KLK9Q2XQG4 91 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 DEFB135Q30KP9 77 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 SPATA45Q537H7 98 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 LYPD5Q6UWN5 251 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 NOP10Q9NPE3 64 aaKnown RBP1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 PKD1L1Q8TDX9 2849 aa1.92□□□□□ -2.1
HMGB1P25-201ENST00000468402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 TRBV6-8A0A0A6YYG3 113 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 TRGV4A0A0C4DH28 118 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 hADV29S1A0JD25 119 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 IGKV2-29A2NJV5 120 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 HCG22E2RYF7 251 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 K7EP34 96 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 DEFB130BP0DP73 79 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 DEFB130AP0DP74 79 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 CNBPP62633 177 aaKnown RBP1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 CLPSL2Q6UWE3 100 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 DMAC1Q96GE9 116 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 UQCR10Q9UDW1 63 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 STAB1Q9NY15 2570 aa1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 HUWE1Q7Z6Z7 4374 aaKnown RBP1.91□□□□□ -2.1
HMGB1P25-201ENST00000468402 TRAV23DV6A0A075B6W5 121 aa1.9□□□□□ -2.11
HMGB1P25-201ENST00000468402 TRBV10-1A0A0K0K1A3 114 aa1.9□□□□□ -2.11
HMGB1P25-201ENST00000468402 LEPROTL1O95214 131 aa1.9□□□□□ -2.11
HMGB1P25-201ENST00000468402 KRTAP10-8P60410 259 aa1.9□□□□□ -2.11
HMGB1P25-201ENST00000468402 DEFB121Q5J5C9 76 aa1.9□□□□□ -2.11
HMGB1P25-201ENST00000468402 C22orf24Q9Y442 160 aa1.9□□□□□ -2.11
HMGB1P25-201ENST00000468402 TRGV2A0A075B6R0 118 aa1.89□□□□□ -2.11
HMGB1P25-201ENST00000468402 A0A0G2JQZ4 141 aa1.89□□□□□ -2.11
HMGB1P25-201ENST00000468402 SYS1-DBNDD2H3BUS1 97 aa1.89□□□□□ -2.11
HMGB1P25-201ENST00000468402 CFAP126Q5VTH2 177 aa1.89□□□□□ -2.11
HMGB1P25-201ENST00000468402 SERP2Q8N6R1 65 aa1.89□□□□□ -2.11
HMGB1P25-201ENST00000468402 IFI27L1Q96BM0 104 aa1.89□□□□□ -2.11
HMGB1P25-201ENST00000468402 ST20Q9HBF5 79 aa1.89□□□□□ -2.11
HMGB1P25-201ENST00000468402 TENM3Q9P273 2699 aa1.89□□□□□ -2.11
HMGB1P25-201ENST00000468402 DNAH9Q9NYC9 4486 aa1.88□□□□□ -2.11
HMGB1P25-201ENST00000468402 DNAL4O96015 105 aa1.88□□□□□ -2.11
HMGB1P25-201ENST00000468402 FCER1GP30273 86 aa1.88□□□□□ -2.11
HMGB1P25-201ENST00000468402 SMIM2Q9BVW6 85 aa1.88□□□□□ -2.11
HMGB1P25-201ENST00000468402 NXT2Q9NPJ8 142 aaKnown RBP1.88□□□□□ -2.11
HMGB1P25-201ENST00000468402 TRBV7-7A0A0K0K1E9 115 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 M0QY20 66 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 IGHV3-30P01768 117 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 IGHV3-30-5P0DP03 117 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 TMEM170BQ5T4T1 132 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 CSAG1Q6PB30 78 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 SFTA2Q6UW10 78 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 ZNF625Q96I27 306 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 CDC42SE1Q9NRR8 79 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 SNURFQ9Y675 71 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 COL7A1Q02388 2944 aa1.87□□□□□ -2.11
HMGB1P25-201ENST00000468402 DNAH10Q8IVF4 4471 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 NUPR2A6NF83 97 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 JMJD7-PLA2G4BH0Y9G9 81 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 COX6CP09669 75 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 POLR2KP53803 58 aaKnown RBP1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 COX6A2Q02221 97 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 KRTAP26-1Q6PEX3 210 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 LIMD2Q9BT23 127 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 LENEPQ9Y5L5 61 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 SPCS1Q9Y6A9 102 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
HMGB1P25-201ENST00000468402 TRBV7-3A0A075B6L6 115 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 TRBV6-4A0A1B0GX49 114 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 A8MTW9 85 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 CHKB-CPT1BH3BT56 60 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 I3L3M4 83 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 K7EIL1 84 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 IGLC3P0DOY3 106 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 TMEM263Q8WUH6 116 aaKnown RBP1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 ODF3Q96PU9 254 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 LYSTQ99698 3801 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 CNFNQ9BYD5 112 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 TOMM7Q9P0U1 55 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 LINC00474Q9P2X8 69 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 PRO1854Q9UHT4 67 aa1.85□□□□□ -2.11
HMGB1P25-201ENST00000468402 NOTCH1P46531 2555 aa1.84□□□□□ -2.11
HMGB1P25-201ENST00000468402 COL6A5A8TX70 2615 aa1.84□□□□□ -2.11
HMGB1P25-201ENST00000468402 TEX49A0A1B0GTD5 131 aa1.84□□□□□ -2.11
HMGB1P25-201ENST00000468402 ZNF815PA8K554 130 aa1.84□□□□□ -2.11
HMGB1P25-201ENST00000468402 C20orf78Q9BR46 151 aa1.84□□□□□ -2.11
HMGB1P25-201ENST00000468402 DYNC2H1Q8NCM8 4307 aaKnown RBP1.84□□□□□ -2.12
HMGB1P25-201ENST00000468402 DNAH1Q9P2D7 4330 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 LINC01546A6NGU7 62 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 IGIPA6NJ69 53 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 F8VRH5 84 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 ANGP03950 147 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms