RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 PRO1933Q9H354 126 aa9.5□□□□□ -0.89
SSBP1-207ENST00000468267 VAMP3Q15836 100 aa9.49□□□□□ -0.89
SSBP1-207ENST00000468267 ASB16-AS1Q495Z4 193 aa9.49□□□□□ -0.89
SSBP1-207ENST00000468267 COX8AP10176 69 aa9.47□□□□□ -0.89
SSBP1-207ENST00000468267 H7C2G1 150 aa9.45□□□□□ -0.9
SSBP1-207ENST00000468267 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
SSBP1-207ENST00000468267 HIST1H4GQ99525 98 aa9.45□□□□□ -0.9
SSBP1-207ENST00000468267 DLEU1O43261 78 aa9.44□□□□□ -0.9
SSBP1-207ENST00000468267 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
SSBP1-207ENST00000468267 Q5XG85 94 aa9.42□□□□□ -0.9
SSBP1-207ENST00000468267 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
SSBP1-207ENST00000468267 hADV29S1A0JD25 119 aa9.41□□□□□ -0.9
SSBP1-207ENST00000468267 C12orf57Q99622 126 aa9.41□□□□□ -0.9
SSBP1-207ENST00000468267 KRTAP4-8A0A0G2JLE6 195 aa9.4□□□□□ -0.9
SSBP1-207ENST00000468267 Q6ZQY7 126 aa9.39□□□□□ -0.91
SSBP1-207ENST00000468267 C14orf144Q96I85 54 aa9.39□□□□□ -0.91
SSBP1-207ENST00000468267 KRTAP4-1Q9BYQ7 146 aa9.38□□□□□ -0.91
SSBP1-207ENST00000468267 F8WEM9 126 aa9.37□□□□□ -0.91
SSBP1-207ENST00000468267 SPATA45Q537H7 98 aa9.37□□□□□ -0.91
SSBP1-207ENST00000468267 BVES-AS1Q5T3Y7 98 aa9.37□□□□□ -0.91
SSBP1-207ENST00000468267 HIGD1BQ9P298 99 aa9.37□□□□□ -0.91
SSBP1-207ENST00000468267 PAM16Q9Y3D7 125 aa9.37□□□□□ -0.91
SSBP1-207ENST00000468267 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
SSBP1-207ENST00000468267 CFC1BP0CG36 223 aa9.35□□□□□ -0.91
SSBP1-207ENST00000468267 CFC1P0CG37 223 aa9.35□□□□□ -0.91
SSBP1-207ENST00000468267 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.35□□□□□ -0.91
SSBP1-207ENST00000468267 VAMP8Q9BV40 100 aa9.35□□□□□ -0.91
SSBP1-207ENST00000468267 C9orf92A6NGG3 77 aa9.34□□□□□ -0.91
SSBP1-207ENST00000468267 IGLV8-61A0A075B6I0 122 aa9.33□□□□□ -0.92
SSBP1-207ENST00000468267 Q6JHZ5 121 aa9.32□□□□□ -0.92
SSBP1-207ENST00000468267 C2orf91Q6ZV80 131 aa9.32□□□□□ -0.92
SSBP1-207ENST00000468267 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
SSBP1-207ENST00000468267 TCL1BO95988 128 aa9.31□□□□□ -0.92
SSBP1-207ENST00000468267 OCIAD2Q56VL3 154 aa9.31□□□□□ -0.92
SSBP1-207ENST00000468267 PPDPFLQ8WWR9 84 aa9.31□□□□□ -0.92
SSBP1-207ENST00000468267 A0A0B4J2C4 111 aa9.3□□□□□ -0.92
SSBP1-207ENST00000468267 IGFL1Q6UW32 110 aa9.28□□□□□ -0.92
SSBP1-207ENST00000468267 CLEC2BQ92478 149 aa9.28□□□□□ -0.92
SSBP1-207ENST00000468267 H0YGX0 51 aa9.27□□□□□ -0.93
SSBP1-207ENST00000468267 CEND1Q8N111 149 aa9.27□□□□□ -0.93
SSBP1-207ENST00000468267 SNHG12Q9BXW3 62 aa9.27□□□□□ -0.93
SSBP1-207ENST00000468267 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
SSBP1-207ENST00000468267 SNCGO76070 127 aa9.25□□□□□ -0.93
SSBP1-207ENST00000468267 PCOTHQ58A44 107 aa9.25□□□□□ -0.93
SSBP1-207ENST00000468267 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
SSBP1-207ENST00000468267 FAM218AQ96MZ4 157 aa9.23□□□□□ -0.93
SSBP1-207ENST00000468267 PRO1854Q9UHT4 67 aa9.23□□□□□ -0.93
SSBP1-207ENST00000468267 H3BUT2 72 aa9.21□□□□□ -0.94
SSBP1-207ENST00000468267 FXYD2P54710 66 aa9.21□□□□□ -0.94
SSBP1-207ENST00000468267 PYY3Q5JQD4 70 aa9.21□□□□□ -0.94
SSBP1-207ENST00000468267 A0A1B0GX51 115 aa9.17□□□□□ -0.94
SSBP1-207ENST00000468267 NDUFV3P56181 108 aaKnown RBP9.17□□□□□ -0.94
SSBP1-207ENST00000468267 RPL37P61927 97 aaKnown RBP9.16□□□□□ -0.94
SSBP1-207ENST00000468267 HSD52Q0P140 79 aa9.15□□□□□ -0.94
SSBP1-207ENST00000468267 TRIAP1O43715 76 aa9.14□□□□□ -0.95
SSBP1-207ENST00000468267 GHRHP01286 108 aa9.14□□□□□ -0.95
SSBP1-207ENST00000468267 Q6Q795 121 aa9.14□□□□□ -0.95
SSBP1-207ENST00000468267 LST1O00453 97 aa9.13□□□□□ -0.95
SSBP1-207ENST00000468267 KRTAP19-2Q3LHN2 52 aa9.12□□□□□ -0.95
SSBP1-207ENST00000468267 TEN1Q86WV5 123 aa9.12□□□□□ -0.95
SSBP1-207ENST00000468267 TMA7Q9Y2S6 64 aaKnown RBP9.12□□□□□ -0.95
SSBP1-207ENST00000468267 H3BMG7 143 aa9.11□□□□□ -0.95
SSBP1-207ENST00000468267 FABP2P12104 132 aa9.11□□□□□ -0.95
SSBP1-207ENST00000468267 SS18L2Q9UHA2 77 aa9.1□□□□□ -0.95
SSBP1-207ENST00000468267 K7ERJ3 54 aa9.09□□□□□ -0.95
SSBP1-207ENST00000468267 LCE1DQ5T752 114 aa9.08□□□□□ -0.96
SSBP1-207ENST00000468267 OBSCN-AS1Q96MR7 158 aa9.08□□□□□ -0.96
SSBP1-207ENST00000468267 KRTAP4-7Q9BYR0 210 aa9.08□□□□□ -0.96
SSBP1-207ENST00000468267 UQCR10Q9UDW1 63 aa9.08□□□□□ -0.96
SSBP1-207ENST00000468267 PSMB2P49721 201 aa9.07□□□□□ -0.96
SSBP1-207ENST00000468267 A0A087WSZ3 146 aa9.05□□□□□ -0.96
SSBP1-207ENST00000468267 DNAL4O96015 105 aa9.05□□□□□ -0.96
SSBP1-207ENST00000468267 COX6CP09669 75 aa9.05□□□□□ -0.96
SSBP1-207ENST00000468267 H3BQ85 93 aa9.04□□□□□ -0.96
SSBP1-207ENST00000468267 ORMDL1Q9P0S3 153 aa9.04□□□□□ -0.96
SSBP1-207ENST00000468267 A0A1W2PNM2 257 aa9.03□□□□□ -0.96
SSBP1-207ENST00000468267 Q75L30 129 aa9.03□□□□□ -0.96
SSBP1-207ENST00000468267 MT1HP80294 61 aa9.01□□□□□ -0.97
SSBP1-207ENST00000468267 Q96NJ1 140 aa9.01□□□□□ -0.97
SSBP1-207ENST00000468267 TMEM256-PLSCR3K7ERE1 68 aa9□□□□□ -0.97
SSBP1-207ENST00000468267 ANKRD29Q8N6D5 301 aa9□□□□□ -0.97
SSBP1-207ENST00000468267 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
SSBP1-207ENST00000468267 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
SSBP1-207ENST00000468267 TRBV7-4A0A0J9YYF1 115 aa8.97□□□□□ -0.97
SSBP1-207ENST00000468267 A0A1B0GV72 72 aa8.96□□□□□ -0.98
SSBP1-207ENST00000468267 TRACP01848 142 aa8.95□□□□□ -0.98
SSBP1-207ENST00000468267 UBE2V1Q13404 147 aa8.95□□□□□ -0.98
SSBP1-207ENST00000468267 SCGB1C2P0DMR2 95 aa8.94□□□□□ -0.98
SSBP1-207ENST00000468267 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
SSBP1-207ENST00000468267 A8MUU9 505 aa8.92□□□□□ -0.98
SSBP1-207ENST00000468267 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
SSBP1-207ENST00000468267 CCKP06307 115 aa8.91□□□□□ -0.98
SSBP1-207ENST00000468267 SIGMAR1Q99720 223 aa8.91□□□□□ -0.98
SSBP1-207ENST00000468267 DSCR10P59022 87 aa8.9□□□□□ -0.98
SSBP1-207ENST00000468267 IGKV4-1P06312 121 aa8.89□□□□□ -0.99
SSBP1-207ENST00000468267 LINC00472Q9H8W2 130 aa8.87□□□□□ -0.99
SSBP1-207ENST00000468267 LINC00313P59037 77 aa8.86□□□□□ -0.99
SSBP1-207ENST00000468267 RBM3P98179 157 aaKnown RBP8.86□□□□□ -0.99
SSBP1-207ENST00000468267 BAALC-AS2P0C853 105 aa8.85□□□□□ -0.99
SSBP1-207ENST00000468267 KRTAP4-9Q9BYQ8 210 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms