RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 PLXNC1O60486 1568 aa-0.32□□□□□ -2.46
PRPF40A-205ENST00000467114 PLCH1Q4KWH8 1693 aa-0.32□□□□□ -2.46
PRPF40A-205ENST00000467114 HMGA1P17096 107 aaKnown RBP-0.32□□□□□ -2.46
PRPF40A-205ENST00000467114 NF1P21359 2839 aa-0.32□□□□□ -2.46
PRPF40A-205ENST00000467114 RICTORQ6R327 1708 aa-0.33□□□□□ -2.46
PRPF40A-205ENST00000467114 WIZO95785 1651 aa-0.33□□□□□ -2.46
PRPF40A-205ENST00000467114 SPRR2EP22531 72 aa-0.33□□□□□ -2.46
PRPF40A-205ENST00000467114 C18orf32Q8TCD1 76 aa-0.33□□□□□ -2.46
PRPF40A-205ENST00000467114 SONP18583 2426 aaKnown RBP-0.33□□□□□ -2.46
PRPF40A-205ENST00000467114 KDM5DQ9BY66 1539 aa-0.33□□□□□ -2.46
PRPF40A-205ENST00000467114 DNAH9Q9NYC9 4486 aa-0.34□□□□□ -2.46
PRPF40A-205ENST00000467114 H3BNG1 76 aa-0.34□□□□□ -2.46
PRPF40A-205ENST00000467114 CFAP43Q8NDM7 1665 aa-0.34□□□□□ -2.46
PRPF40A-205ENST00000467114 ABCC1P33527 1531 aa-0.34□□□□□ -2.46
PRPF40A-205ENST00000467114 CCDC88BA6NC98 1476 aa-0.35□□□□□ -2.46
PRPF40A-205ENST00000467114 DDX60LQ5H9U9 1706 aaKnown RBP-0.35□□□□□ -2.47
PRPF40A-205ENST00000467114 DEFB130BP0DP73 79 aa-0.35□□□□□ -2.47
PRPF40A-205ENST00000467114 DEFB130AP0DP74 79 aa-0.35□□□□□ -2.47
PRPF40A-205ENST00000467114 MACF1Q9UPN3 7388 aaKnown RBP-0.35□□□□□ -2.47
PRPF40A-205ENST00000467114 DMXL1Q9Y485 3027 aa-0.35□□□□□ -2.47
PRPF40A-205ENST00000467114 DNAH6Q9C0G6 4158 aa-0.36□□□□□ -2.47
PRPF40A-205ENST00000467114 LAMA5O15230 3695 aa-0.36□□□□□ -2.47
PRPF40A-205ENST00000467114 IAPPP10997 89 aa-0.36□□□□□ -2.47
PRPF40A-205ENST00000467114 KRTAP19-8Q3LI54 63 aa-0.36□□□□□ -2.47
PRPF40A-205ENST00000467114 MXRA5Q9NR99 2828 aa-0.36□□□□□ -2.47
PRPF40A-205ENST00000467114 PCLOQ9Y6V0 5065 aa-0.36□□□□□ -2.47
PRPF40A-205ENST00000467114 KMT2CQ8NEZ4 4911 aaKnown RBP-0.36□□□□□ -2.47
PRPF40A-205ENST00000467114 ZZEF1O43149 2961 aa-0.36□□□□□ -2.47
PRPF40A-205ENST00000467114 CFAP74Q9C0B2 1584 aa-0.36□□□□□ -2.47
PRPF40A-205ENST00000467114 RRBP1Q9P2E9 1410 aaKnown RBP-0.37□□□□□ -2.47
PRPF40A-205ENST00000467114 SPG11Q96JI7 2443 aa-0.37□□□□□ -2.47
PRPF40A-205ENST00000467114 DEPDC5O75140 1603 aa-0.37□□□□□ -2.47
PRPF40A-205ENST00000467114 LYNX1G3V0Z9 82 aa-0.37□□□□□ -2.47
PRPF40A-205ENST00000467114 H3BVH4 76 aa-0.37□□□□□ -2.47
PRPF40A-205ENST00000467114 HTTP42858 3142 aa-0.37□□□□□ -2.47
PRPF40A-205ENST00000467114 CD163L1Q9NR16 1453 aa-0.37□□□□□ -2.47
PRPF40A-205ENST00000467114 AKAP9Q99996 3911 aa-0.38□□□□□ -2.47
PRPF40A-205ENST00000467114 FAT3Q8TDW7 4589 aa-0.38□□□□□ -2.47
PRPF40A-205ENST00000467114 NBPF19A0A087WUL8 3843 aa-0.38□□□□□ -2.47
PRPF40A-205ENST00000467114 DEFB131BA0A096LNP1 70 aa-0.38□□□□□ -2.47
PRPF40A-205ENST00000467114 CUBNO60494 3623 aa-0.38□□□□□ -2.47
PRPF40A-205ENST00000467114 MAP3K1Q13233 1512 aa-0.38□□□□□ -2.47
PRPF40A-205ENST00000467114 CRIP1P50238 77 aa-0.39□□□□□ -2.47
PRPF40A-205ENST00000467114 ENHOQ6UWT2 76 aa-0.39□□□□□ -2.47
PRPF40A-205ENST00000467114 ANKARQ7Z5J8 1434 aa-0.39□□□□□ -2.47
PRPF40A-205ENST00000467114 ANKRD50Q9ULJ7 1429 aa-0.39□□□□□ -2.47
PRPF40A-205ENST00000467114 FASNP49327 2511 aaKnown RBP-0.39□□□□□ -2.47
PRPF40A-205ENST00000467114 EPG5Q9HCE0 2579 aa-0.4□□□□□ -2.47
PRPF40A-205ENST00000467114 TACC2O95359 2948 aa-0.4□□□□□ -2.47
PRPF40A-205ENST00000467114 TJP1Q07157 1748 aa-0.4□□□□□ -2.47
PRPF40A-205ENST00000467114 VPS13BQ7Z7G8 4022 aa-0.4□□□□□ -2.47
PRPF40A-205ENST00000467114 PRLHP81277 87 aa-0.4□□□□□ -2.47
PRPF40A-205ENST00000467114 LMTK2Q8IWU2 1503 aa-0.4□□□□□ -2.47
PRPF40A-205ENST00000467114 HIVEP1P15822 2718 aa-0.4□□□□□ -2.47
PRPF40A-205ENST00000467114 PKHD1L1Q86WI1 4243 aa-0.4□□□□□ -2.47
PRPF40A-205ENST00000467114 ABCA8O94911 1581 aa-0.4□□□□□ -2.47
PRPF40A-205ENST00000467114 RALGAPBQ86X10 1494 aa-0.41□□□□□ -2.47
PRPF40A-205ENST00000467114 UBL5Q9BZL1 73 aa-0.41□□□□□ -2.48
PRPF40A-205ENST00000467114 KCNQ1DNQ9H478 68 aa-0.41□□□□□ -2.48
PRPF40A-205ENST00000467114 STARD9Q9P2P6 4700 aa-0.41□□□□□ -2.48
PRPF40A-205ENST00000467114 ITSN1Q15811 1721 aa-0.41□□□□□ -2.48
PRPF40A-205ENST00000467114 GCN1Q92616 2671 aaKnown RBP-0.41□□□□□ -2.48
PRPF40A-205ENST00000467114 KALRNO60229 2985 aa-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 HERC1Q15751 4861 aa-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 C9orf92A6NGG3 77 aa-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 MRPL33O75394 65 aaKnown RBP-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 DEFB106AQ8N104 65 aa-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 SPRR2FQ96RM1 72 aa-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 HFM1A2PYH4 1435 aa-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 VPS13DQ5THJ4 4388 aa-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 APOBP04114 4563 aaKnown RBP-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.42□□□□□ -2.48
PRPF40A-205ENST00000467114 ANK3Q12955 4377 aaKnown RBP-0.43□□□□□ -2.48
PRPF40A-205ENST00000467114 MT1AP04731 61 aa-0.43□□□□□ -2.48
PRPF40A-205ENST00000467114 HILPDAQ9Y5L2 63 aa-0.43□□□□□ -2.48
PRPF40A-205ENST00000467114 S4R3F8 94 aa-0.43□□□□□ -2.48
PRPF40A-205ENST00000467114 DIP2AQ14689 1571 aa-0.44□□□□□ -2.48
PRPF40A-205ENST00000467114 FAT1Q14517 4588 aa-0.44□□□□□ -2.48
PRPF40A-205ENST00000467114 ANKRD11Q6UB99 2663 aaPredicted RBP-0.44□□□□□ -2.48
PRPF40A-205ENST00000467114 DNAH3Q8TD57 4116 aa-0.45□□□□□ -2.48
PRPF40A-205ENST00000467114 RNF17Q9BXT8 1623 aaKnown RBP-0.45□□□□□ -2.48
PRPF40A-205ENST00000467114 ZC3H13Q5T200 1668 aaKnown RBP-0.45□□□□□ -2.48
PRPF40A-205ENST00000467114 ETDCA0A1B0GVM5 59 aa-0.45□□□□□ -2.48
PRPF40A-205ENST00000467114 NRAPQ86VF7 1730 aa-0.45□□□□□ -2.48
PRPF40A-205ENST00000467114 MYO5CQ9NQX4 1742 aa-0.45□□□□□ -2.48
PRPF40A-205ENST00000467114 CEP290O15078 2479 aa-0.45□□□□□ -2.48
PRPF40A-205ENST00000467114 PKD1L2Q7Z442 2459 aa-0.45□□□□□ -2.48
PRPF40A-205ENST00000467114 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.45□□□□□ -2.48
PRPF40A-205ENST00000467114 IQGAP3Q86VI3 1631 aa-0.46□□□□□ -2.48
PRPF40A-205ENST00000467114 LRRIQ1Q96JM4 1722 aa-0.46□□□□□ -2.48
PRPF40A-205ENST00000467114 MTORP42345 2549 aa-0.46□□□□□ -2.48
PRPF40A-205ENST00000467114 CDC42BPGQ6DT37 1551 aa-0.46□□□□□ -2.48
PRPF40A-205ENST00000467114 TEP1Q99973 2627 aaKnown RBP-0.46□□□□□ -2.48
PRPF40A-205ENST00000467114 PARP4Q9UKK3 1724 aaKnown RBP-0.47□□□□□ -2.48
PRPF40A-205ENST00000467114 KIAA0586Q9BVV6 1533 aa-0.47□□□□□ -2.48
PRPF40A-205ENST00000467114 UTP20O75691 2785 aaKnown RBP-0.47□□□□□ -2.48
PRPF40A-205ENST00000467114 ATXN8Q156A1 80 aa-0.47□□□□□ -2.48
PRPF40A-205ENST00000467114 DNAH11Q96DT5 4516 aa-0.48□□□□□ -2.49
PRPF40A-205ENST00000467114 UGGT2Q9NYU1 1516 aa-0.48□□□□□ -2.49
PRPF40A-205ENST00000467114 THOC2Q8NI27 1593 aaKnown RBP-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms