RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 HSPB8Q9UJY1 196 aa2.86□□□□□ -1.95
CXXC4-202ENST00000466963 LCE5AQ5TCM9 118 aa2.86□□□□□ -1.95
CXXC4-202ENST00000466963 A0A096LNJ9 63 aa2.85□□□□□ -1.95
CXXC4-202ENST00000466963 DPM2O94777 84 aa2.85□□□□□ -1.95
CXXC4-202ENST00000466963 IGFL1Q6UW32 110 aa2.85□□□□□ -1.95
CXXC4-202ENST00000466963 C18orf32Q8TCD1 76 aa2.85□□□□□ -1.95
CXXC4-202ENST00000466963 LINC01545Q5VT33 79 aa2.84□□□□□ -1.95
CXXC4-202ENST00000466963 PCP2Q8IVA1 136 aa2.84□□□□□ -1.95
CXXC4-202ENST00000466963 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.84□□□□□ -1.96
CXXC4-202ENST00000466963 FAM218AQ96MZ4 157 aa2.84□□□□□ -1.96
CXXC4-202ENST00000466963 A0A0G2JQZ4 141 aa2.83□□□□□ -1.96
CXXC4-202ENST00000466963 C8orf87E5RJ46 101 aa2.83□□□□□ -1.96
CXXC4-202ENST00000466963 E9PLD3 99 aa2.83□□□□□ -1.96
CXXC4-202ENST00000466963 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
CXXC4-202ENST00000466963 MT1FP04733 61 aa2.82□□□□□ -1.96
CXXC4-202ENST00000466963 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
CXXC4-202ENST00000466963 LINC00308Q8TCZ7 52 aa2.82□□□□□ -1.96
CXXC4-202ENST00000466963 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
CXXC4-202ENST00000466963 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
CXXC4-202ENST00000466963 TRAPPC1Q9Y5R8 145 aa2.82□□□□□ -1.96
CXXC4-202ENST00000466963 USH2AO75445 5202 aa2.82□□□□□ -1.96
CXXC4-202ENST00000466963 SNRPEP62304 92 aaKnown RBP2.81□□□□□ -1.96
CXXC4-202ENST00000466963 CLLU1Q5K131 121 aa2.81□□□□□ -1.96
CXXC4-202ENST00000466963 TEN1Q86WV5 123 aa2.81□□□□□ -1.96
CXXC4-202ENST00000466963 Q96NJ1 140 aa2.81□□□□□ -1.96
CXXC4-202ENST00000466963 TMA7Q9Y2S6 64 aaKnown RBP2.81□□□□□ -1.96
CXXC4-202ENST00000466963 LEPROTL1O95214 131 aa2.81□□□□□ -1.96
CXXC4-202ENST00000466963 IGKCP01834 107 aa2.81□□□□□ -1.96
CXXC4-202ENST00000466963 OR13C6PQ8NH95 151 aa2.81□□□□□ -1.96
CXXC4-202ENST00000466963 HRCT1Q6UXD1 115 aa2.8□□□□□ -1.96
CXXC4-202ENST00000466963 DSCR8Q96T75 97 aa2.8□□□□□ -1.96
CXXC4-202ENST00000466963 HRES1P13985 223 aa2.8□□□□□ -1.96
CXXC4-202ENST00000466963 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
CXXC4-202ENST00000466963 WFDC13Q8IUB5 93 aa2.8□□□□□ -1.96
CXXC4-202ENST00000466963 A0A1B0GX51 115 aa2.79□□□□□ -1.96
CXXC4-202ENST00000466963 HSBP1O75506 76 aa2.79□□□□□ -1.96
CXXC4-202ENST00000466963 RAB37Q96AX2 223 aa2.79□□□□□ -1.96
CXXC4-202ENST00000466963 OBSCN-AS1Q96MR7 158 aa2.79□□□□□ -1.96
CXXC4-202ENST00000466963 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
CXXC4-202ENST00000466963 TMEM218A2RU14 115 aa2.79□□□□□ -1.96
CXXC4-202ENST00000466963 C12orf57Q99622 126 aa2.79□□□□□ -1.96
CXXC4-202ENST00000466963 URB1-AS1Q96HZ7 61 aa2.78□□□□□ -1.96
CXXC4-202ENST00000466963 A0A0U1RRA0 63 aa2.78□□□□□ -1.96
CXXC4-202ENST00000466963 BVES-AS1Q5T3Y7 98 aa2.77□□□□□ -1.97
CXXC4-202ENST00000466963 LINC00313P59037 77 aa2.77□□□□□ -1.97
CXXC4-202ENST00000466963 NDUFA5Q16718 116 aa2.77□□□□□ -1.97
CXXC4-202ENST00000466963 J3KT08 172 aa2.76□□□□□ -1.97
CXXC4-202ENST00000466963 LINC00575Q6W349 94 aa2.76□□□□□ -1.97
CXXC4-202ENST00000466963 LITAFQ99732 161 aa2.76□□□□□ -1.97
CXXC4-202ENST00000466963 NEBP20929 6669 aa2.76□□□□□ -1.97
CXXC4-202ENST00000466963 hADV29S1A0JD25 119 aa2.76□□□□□ -1.97
CXXC4-202ENST00000466963 A0A1B0GW54 56 aa2.75□□□□□ -1.97
CXXC4-202ENST00000466963 SNAPINO95295 136 aa2.75□□□□□ -1.97
CXXC4-202ENST00000466963 TRGC2P03986 189 aa2.75□□□□□ -1.97
CXXC4-202ENST00000466963 PET117Q6UWS5 81 aa2.75□□□□□ -1.97
CXXC4-202ENST00000466963 DEFB105AQ8NG35 78 aa2.75□□□□□ -1.97
CXXC4-202ENST00000466963 TSPEAR-AS2P59090 65 aa2.75□□□□□ -1.97
CXXC4-202ENST00000466963 SNHG12Q9BXW3 62 aa2.75□□□□□ -1.97
CXXC4-202ENST00000466963 NOTCH2NLQ7Z3S9 236 aa2.74□□□□□ -1.97
CXXC4-202ENST00000466963 RPS10P5Q9NQ39 176 aa2.74□□□□□ -1.97
CXXC4-202ENST00000466963 H0YGX0 51 aa2.73□□□□□ -1.97
CXXC4-202ENST00000466963 SLC7A5P1Q8MH63 180 aa2.73□□□□□ -1.97
CXXC4-202ENST00000466963 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
CXXC4-202ENST00000466963 TRBV7-4A0A0J9YYF1 115 aa2.73□□□□□ -1.97
CXXC4-202ENST00000466963 ADAMTSL4-AS1Q5T5F5 129 aa2.73□□□□□ -1.97
CXXC4-202ENST00000466963 SVBPQ8N300 66 aa2.73□□□□□ -1.97
CXXC4-202ENST00000466963 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
CXXC4-202ENST00000466963 CRIPTQ9P021 101 aa2.72□□□□□ -1.97
CXXC4-202ENST00000466963 ZCCHC13Q8WW36 166 aaKnown RBP2.72□□□□□ -1.97
CXXC4-202ENST00000466963 KRTAP23-1A1A580 65 aa2.71□□□□□ -1.98
CXXC4-202ENST00000466963 KRTAP16-1A8MUX0 517 aa2.71□□□□□ -1.98
CXXC4-202ENST00000466963 FABP4P15090 132 aa2.71□□□□□ -1.98
CXXC4-202ENST00000466963 A6NDN8 102 aa2.7□□□□□ -1.98
CXXC4-202ENST00000466963 A6NN06 94 aa2.7□□□□□ -1.98
CXXC4-202ENST00000466963 H1FX-AS1Q4G0G2 97 aa2.7□□□□□ -1.98
CXXC4-202ENST00000466963 Q5VV11 94 aa2.7□□□□□ -1.98
CXXC4-202ENST00000466963 KRTAP2-2Q9BYT5 123 aa2.7□□□□□ -1.98
CXXC4-202ENST00000466963 KRTAP2-1Q9BYU5 128 aa2.7□□□□□ -1.98
CXXC4-202ENST00000466963 SMIM11BQ8TCY0 68 aa2.69□□□□□ -1.98
CXXC4-202ENST00000466963 KRTAP19-8Q3LI54 63 aa2.69□□□□□ -1.98
CXXC4-202ENST00000466963 Q6ZQY7 126 aa2.69□□□□□ -1.98
CXXC4-202ENST00000466963 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
CXXC4-202ENST00000466963 SCGB1D4Q6XE38 83 aa2.68□□□□□ -1.98
CXXC4-202ENST00000466963 COLCA2A8K830 154 aa2.68□□□□□ -1.98
CXXC4-202ENST00000466963 K7EQZ3 153 aa2.68□□□□□ -1.98
CXXC4-202ENST00000466963 PMCHL1Q16048 86 aa2.68□□□□□ -1.98
CXXC4-202ENST00000466963 SIGMAR1Q99720 223 aa2.68□□□□□ -1.98
CXXC4-202ENST00000466963 SYS1-DBNDD2H3BUS1 97 aa2.67□□□□□ -1.98
CXXC4-202ENST00000466963 NDUFV3P56181 108 aaKnown RBP2.67□□□□□ -1.98
CXXC4-202ENST00000466963 Q8N9P0 234 aaPredicted RBP2.67□□□□□ -1.98
CXXC4-202ENST00000466963 YPEL4Q96NS1 127 aa2.67□□□□□ -1.98
CXXC4-202ENST00000466963 NDUFB1O75438 58 aa2.66□□□□□ -1.98
CXXC4-202ENST00000466963 SPINK7P58062 85 aa2.66□□□□□ -1.98
CXXC4-202ENST00000466963 A0A1B0GVX0 72 aa2.66□□□□□ -1.98
CXXC4-202ENST00000466963 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.98
CXXC4-202ENST00000466963 SERF1AO75920 110 aa2.65□□□□□ -1.98
CXXC4-202ENST00000466963 IGKV4-1P06312 121 aa2.65□□□□□ -1.99
CXXC4-202ENST00000466963 DSCR10P59022 87 aa2.65□□□□□ -1.99
CXXC4-202ENST00000466963 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.99
CXXC4-202ENST00000466963 LINC00472Q9H8W2 130 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms