RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 LINC00336Q6ZUF6 198 aa12.96□□□□□ -0.33
PPP1R3F-203ENST00000466508 SPRR1BP22528 89 aa12.95□□□□□ -0.34
PPP1R3F-203ENST00000466508 C1orf137Q5JT78 98 aa12.95□□□□□ -0.34
PPP1R3F-203ENST00000466508 F8WEM9 126 aa12.94□□□□□ -0.34
PPP1R3F-203ENST00000466508 SCGB1A1P11684 91 aa12.93□□□□□ -0.34
PPP1R3F-203ENST00000466508 SCXQ7RTU7 201 aa12.93□□□□□ -0.34
PPP1R3F-203ENST00000466508 UBL5Q9BZL1 73 aa12.93□□□□□ -0.34
PPP1R3F-203ENST00000466508 TRBV7-7A0A0K0K1E9 115 aa12.92□□□□□ -0.34
PPP1R3F-203ENST00000466508 PKHD1P08F94 4074 aa12.91□□□□□ -0.34
PPP1R3F-203ENST00000466508 BIRC6Q9NR09 4857 aa12.91□□□□□ -0.34
PPP1R3F-203ENST00000466508 Q6JHZ5 121 aa12.9□□□□□ -0.34
PPP1R3F-203ENST00000466508 Q6Q795 121 aa12.9□□□□□ -0.34
PPP1R3F-203ENST00000466508 ZNF861PO60384 105 aa12.89□□□□□ -0.35
PPP1R3F-203ENST00000466508 IGLV8-61A0A075B6I0 122 aa12.88□□□□□ -0.35
PPP1R3F-203ENST00000466508 IMUPQ9GZP8 106 aa12.87□□□□□ -0.35
PPP1R3F-203ENST00000466508 A0A1W2PNM2 257 aa12.85□□□□□ -0.35
PPP1R3F-203ENST00000466508 PCP4P48539 62 aa12.85□□□□□ -0.35
PPP1R3F-203ENST00000466508 Q6ZVQ6 151 aa12.85□□□□□ -0.35
PPP1R3F-203ENST00000466508 Q8NBF4 154 aa12.85□□□□□ -0.35
PPP1R3F-203ENST00000466508 SPRR4Q96PI1 79 aa12.85□□□□□ -0.35
PPP1R3F-203ENST00000466508 A0A1B0GW54 56 aa12.84□□□□□ -0.35
PPP1R3F-203ENST00000466508 IGLV7-43P04211 117 aa12.84□□□□□ -0.35
PPP1R3F-203ENST00000466508 HAMPP81172 84 aa12.84□□□□□ -0.35
PPP1R3F-203ENST00000466508 ATP5EP2Q5VTU8 51 aa12.84□□□□□ -0.35
PPP1R3F-203ENST00000466508 ZNF706Q9Y5V0 76 aaPredicted RBP12.84□□□□□ -0.35
PPP1R3F-203ENST00000466508 IGKV3D-7A0A0C4DH55 119 aa12.83□□□□□ -0.36
PPP1R3F-203ENST00000466508 IGFL1Q6UW32 110 aa12.82□□□□□ -0.36
PPP1R3F-203ENST00000466508 LINC00483Q53H64 154 aa12.82□□□□□ -0.36
PPP1R3F-203ENST00000466508 A0A1B0GVY2 172 aa12.81□□□□□ -0.36
PPP1R3F-203ENST00000466508 LRP1BQ9NZR2 4599 aa12.8□□□□□ -0.36
PPP1R3F-203ENST00000466508 CRYGAP11844 174 aa12.77□□□□□ -0.37
PPP1R3F-203ENST00000466508 A0A0G2JQZ4 141 aa12.76□□□□□ -0.37
PPP1R3F-203ENST00000466508 NREPQ16612 68 aa12.74□□□□□ -0.37
PPP1R3F-203ENST00000466508 CXCL6P80162 114 aa12.72□□□□□ -0.37
PPP1R3F-203ENST00000466508 VPS13BQ7Z7G8 4022 aa12.7□□□□□ -0.38
PPP1R3F-203ENST00000466508 IGLV9-49A0A0B4J1Y8 123 aa12.7□□□□□ -0.38
PPP1R3F-203ENST00000466508 DYNC1H1Q14204 4646 aaKnown RBP12.69□□□□□ -0.38
PPP1R3F-203ENST00000466508 FAM236AA0A1B0GUQ0 79 aa12.68□□□□□ -0.38
PPP1R3F-203ENST00000466508 FAM236BA0A1B0GV22 79 aa12.68□□□□□ -0.38
PPP1R3F-203ENST00000466508 HIST1H4AP62805 103 aaKnown RBP12.68□□□□□ -0.38
PPP1R3F-203ENST00000466508 C9orf153Q5TBE3 101 aa12.68□□□□□ -0.38
PPP1R3F-203ENST00000466508 RPL37AP61513 92 aaKnown RBP12.67□□□□□ -0.38
PPP1R3F-203ENST00000466508 ANAPC11Q9NYG5 84 aa12.67□□□□□ -0.38
PPP1R3F-203ENST00000466508 A0A087WVE0 104 aa12.65□□□□□ -0.38
PPP1R3F-203ENST00000466508 A0A087WSZ3 146 aa12.64□□□□□ -0.39
PPP1R3F-203ENST00000466508 BPY2O14599 106 aa12.62□□□□□ -0.39
PPP1R3F-203ENST00000466508 MOBPQ13875 183 aa12.62□□□□□ -0.39
PPP1R3F-203ENST00000466508 ANAPC13Q9BS18 74 aa12.6□□□□□ -0.39
PPP1R3F-203ENST00000466508 KIAA1109Q2LD37 5005 aa12.58□□□□□ -0.4
PPP1R3F-203ENST00000466508 APOBP04114 4563 aaKnown RBP12.57□□□□□ -0.4
PPP1R3F-203ENST00000466508 Q8N9L7 120 aa12.53□□□□□ -0.4
PPP1R3F-203ENST00000466508 IGKV4-1P06312 121 aa12.52□□□□□ -0.41
PPP1R3F-203ENST00000466508 HERC2O95714 4834 aa12.51□□□□□ -0.41
PPP1R3F-203ENST00000466508 ATOX1O00244 68 aa12.51□□□□□ -0.41
PPP1R3F-203ENST00000466508 FAM229BQ4G0N7 80 aa12.51□□□□□ -0.41
PPP1R3F-203ENST00000466508 SMR3BP02814 79 aaPredicted RBP12.49□□□□□ -0.41
PPP1R3F-203ENST00000466508 DSCR10P59022 87 aa12.49□□□□□ -0.41
PPP1R3F-203ENST00000466508 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
PPP1R3F-203ENST00000466508 A0A087X002 238 aa12.48□□□□□ -0.41
PPP1R3F-203ENST00000466508 KRTAP1-4P0C5Y4 121 aa12.48□□□□□ -0.41
PPP1R3F-203ENST00000466508 SSBP3-AS1Q7Z2R9 100 aa12.48□□□□□ -0.41
PPP1R3F-203ENST00000466508 LINC00472Q9H8W2 130 aa12.46□□□□□ -0.41
PPP1R3F-203ENST00000466508 CDK2AP2O75956 126 aa12.46□□□□□ -0.42
PPP1R3F-203ENST00000466508 DEFB116Q30KQ4 102 aa12.46□□□□□ -0.42
PPP1R3F-203ENST00000466508 SPINK6Q6UWN8 80 aa12.45□□□□□ -0.42
PPP1R3F-203ENST00000466508 SS18L2Q9UHA2 77 aa12.44□□□□□ -0.42
PPP1R3F-203ENST00000466508 KRTAP13-2Q52LG2 175 aa12.44□□□□□ -0.42
PPP1R3F-203ENST00000466508 K7EQZ3 153 aa12.42□□□□□ -0.42
PPP1R3F-203ENST00000466508 RYR1P21817 5038 aa12.42□□□□□ -0.42
PPP1R3F-203ENST00000466508 CD164Q04900 197 aa12.42□□□□□ -0.42
PPP1R3F-203ENST00000466508 FAT1Q14517 4588 aa12.42□□□□□ -0.42
PPP1R3F-203ENST00000466508 PLA2G1BP04054 148 aaKnown RBP12.38□□□□□ -0.43
PPP1R3F-203ENST00000466508 KRTAP10-4P60372 401 aaPredicted RBP12.38□□□□□ -0.43
PPP1R3F-203ENST00000466508 Q96NJ1 140 aa12.38□□□□□ -0.43
PPP1R3F-203ENST00000466508 J3KT08 172 aa12.37□□□□□ -0.43
PPP1R3F-203ENST00000466508 SERP2Q8N6R1 65 aa12.35□□□□□ -0.43
PPP1R3F-203ENST00000466508 A8MWP4 228 aa12.34□□□□□ -0.43
PPP1R3F-203ENST00000466508 HSPG2P98160 4391 aa12.34□□□□□ -0.43
PPP1R3F-203ENST00000466508 CCDC179H3BU77 68 aa12.33□□□□□ -0.44
PPP1R3F-203ENST00000466508 COX7CP15954 63 aa12.32□□□□□ -0.44
PPP1R3F-203ENST00000466508 UQCRQO14949 82 aa12.31□□□□□ -0.44
PPP1R3F-203ENST00000466508 PRR15Q8IV56 129 aa12.31□□□□□ -0.44
PPP1R3F-203ENST00000466508 SMIM20Q8N5G0 67 aa12.3□□□□□ -0.44
PPP1R3F-203ENST00000466508 HCG22E2RYF7 251 aa12.29□□□□□ -0.44
PPP1R3F-203ENST00000466508 Q8N1X5 172 aa12.28□□□□□ -0.44
PPP1R3F-203ENST00000466508 TYMSOSQ8TAI1 123 aa12.27□□□□□ -0.44
PPP1R3F-203ENST00000466508 TRAV7A0A075B6U4 112 aa12.27□□□□□ -0.45
PPP1R3F-203ENST00000466508 KRTAP17-1Q9BYP8 105 aa12.27□□□□□ -0.45
PPP1R3F-203ENST00000466508 NDUFB1O75438 58 aa12.25□□□□□ -0.45
PPP1R3F-203ENST00000466508 ASB16-AS1Q495Z4 193 aa12.25□□□□□ -0.45
PPP1R3F-203ENST00000466508 KRTAP4-5Q9BYR2 181 aa12.25□□□□□ -0.45
PPP1R3F-203ENST00000466508 Q5XG85 94 aa12.23□□□□□ -0.45
PPP1R3F-203ENST00000466508 PCLOQ9Y6V0 5065 aa12.23□□□□□ -0.45
PPP1R3F-203ENST00000466508 FAM229AH3BQW9 127 aa12.23□□□□□ -0.45
PPP1R3F-203ENST00000466508 PRR26Q8N8Z3 221 aa12.23□□□□□ -0.45
PPP1R3F-203ENST00000466508 OCR1Q9BZK8 76 aa12.21□□□□□ -0.46
PPP1R3F-203ENST00000466508 WFDC13Q8IUB5 93 aa12.2□□□□□ -0.46
PPP1R3F-203ENST00000466508 C4orf48Q5BLP8 95 aa12.19□□□□□ -0.46
PPP1R3F-203ENST00000466508 PKHD1L1Q86WI1 4243 aa12.19□□□□□ -0.46
PPP1R3F-203ENST00000466508 ABCA13Q86UQ4 5058 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms