RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 TRBV7-6A0A0J9YX20 115 aa8.51□□□□□ -1.05
HMGXB4-206ENST00000466438 ZNF861PO60384 105 aa8.51□□□□□ -1.05
HMGXB4-206ENST00000466438 UBE2BP63146 152 aa8.51□□□□□ -1.05
HMGXB4-206ENST00000466438 ASB16-AS1Q495Z4 193 aa8.51□□□□□ -1.05
HMGXB4-206ENST00000466438 TCL1BO95988 128 aa8.5□□□□□ -1.05
HMGXB4-206ENST00000466438 A0A1B0GX51 115 aa8.49□□□□□ -1.05
HMGXB4-206ENST00000466438 RPL37AP8A6NKH3 93 aa8.49□□□□□ -1.05
HMGXB4-206ENST00000466438 LST1O00453 97 aa8.49□□□□□ -1.05
HMGXB4-206ENST00000466438 UBE2V1Q13404 147 aa8.49□□□□□ -1.05
HMGXB4-206ENST00000466438 CLEC2BQ92478 149 aa8.49□□□□□ -1.05
HMGXB4-206ENST00000466438 COX7BP24311 80 aa8.48□□□□□ -1.05
HMGXB4-206ENST00000466438 ETDCA0A1B0GVM5 59 aa8.47□□□□□ -1.05
HMGXB4-206ENST00000466438 SLC25A20O43772 301 aa8.47□□□□□ -1.05
HMGXB4-206ENST00000466438 DNAL4O96015 105 aa8.47□□□□□ -1.05
HMGXB4-206ENST00000466438 TRACP01848 142 aa8.47□□□□□ -1.05
HMGXB4-206ENST00000466438 ELOF1P60002 83 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-206ENST00000466438 H3BMG7 143 aa8.46□□□□□ -1.06
HMGXB4-206ENST00000466438 SPRR1AP35321 89 aa8.45□□□□□ -1.06
HMGXB4-206ENST00000466438 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
HMGXB4-206ENST00000466438 LINC00575Q6W349 94 aa8.43□□□□□ -1.06
HMGXB4-206ENST00000466438 FAM218AQ96MZ4 157 aa8.43□□□□□ -1.06
HMGXB4-206ENST00000466438 hADV29S1A0JD25 119 aa8.42□□□□□ -1.06
HMGXB4-206ENST00000466438 MT1HP80294 61 aa8.42□□□□□ -1.06
HMGXB4-206ENST00000466438 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
HMGXB4-206ENST00000466438 Q6ZRX8 168 aa8.42□□□□□ -1.06
HMGXB4-206ENST00000466438 DHRS4-AS1Q9P1J3 65 aa8.42□□□□□ -1.06
HMGXB4-206ENST00000466438 C9JAW5 83 aa8.41□□□□□ -1.06
HMGXB4-206ENST00000466438 F8W1H4 67 aa8.41□□□□□ -1.06
HMGXB4-206ENST00000466438 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
HMGXB4-206ENST00000466438 B5MCH6 92 aa8.4□□□□□ -1.06
HMGXB4-206ENST00000466438 KRTAP4-16G5E9R7 235 aaPredicted RBP8.4□□□□□ -1.06
HMGXB4-206ENST00000466438 FAM19A1Q7Z5A9 133 aa8.4□□□□□ -1.06
HMGXB4-206ENST00000466438 H3BQ85 93 aa8.39□□□□□ -1.07
HMGXB4-206ENST00000466438 H3BT86 120 aa8.39□□□□□ -1.07
HMGXB4-206ENST00000466438 BCE1O60756 84 aa8.38□□□□□ -1.07
HMGXB4-206ENST00000466438 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
HMGXB4-206ENST00000466438 ORMDL1Q9P0S3 153 aa8.38□□□□□ -1.07
HMGXB4-206ENST00000466438 UBE2AP49459 152 aa8.37□□□□□ -1.07
HMGXB4-206ENST00000466438 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-206ENST00000466438 OCIAD2Q56VL3 154 aa8.37□□□□□ -1.07
HMGXB4-206ENST00000466438 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-206ENST00000466438 KRTAP13-3Q3SY46 172 aa8.36□□□□□ -1.07
HMGXB4-206ENST00000466438 MTURNQ8N3F0 131 aa8.36□□□□□ -1.07
HMGXB4-206ENST00000466438 ANKRD29Q8N6D5 301 aa8.36□□□□□ -1.07
HMGXB4-206ENST00000466438 PRO0461Q9UI25 63 aa8.36□□□□□ -1.07
HMGXB4-206ENST00000466438 KRTAP19-2Q3LHN2 52 aa8.35□□□□□ -1.07
HMGXB4-206ENST00000466438 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-206ENST00000466438 PRLHP81277 87 aa8.34□□□□□ -1.07
HMGXB4-206ENST00000466438 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.07
HMGXB4-206ENST00000466438 Q6ZQY7 126 aa8.34□□□□□ -1.07
HMGXB4-206ENST00000466438 TMEM256-PLSCR3K7ERE1 68 aa8.33□□□□□ -1.08
HMGXB4-206ENST00000466438 BAALC-AS2P0C853 105 aa8.33□□□□□ -1.08
HMGXB4-206ENST00000466438 Q9BRP9 147 aa8.33□□□□□ -1.08
HMGXB4-206ENST00000466438 PPDPFLQ8WWR9 84 aa8.32□□□□□ -1.08
HMGXB4-206ENST00000466438 HIGD2AQ9BW72 106 aa8.31□□□□□ -1.08
HMGXB4-206ENST00000466438 XP32Q5T750 250 aa8.3□□□□□ -1.08
HMGXB4-206ENST00000466438 SMCR5Q8TEV8 140 aa8.3□□□□□ -1.08
HMGXB4-206ENST00000466438 TEN1Q86WV5 123 aa8.29□□□□□ -1.08
HMGXB4-206ENST00000466438 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
HMGXB4-206ENST00000466438 ETDBQ3ZM63 59 aa8.27□□□□□ -1.09
HMGXB4-206ENST00000466438 ZNF706Q9Y5V0 76 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-206ENST00000466438 IGLV5-48A0A075B6I7 105 aa8.25□□□□□ -1.09
HMGXB4-206ENST00000466438 JMJD7-PLA2G4BH0Y9G9 81 aa8.25□□□□□ -1.09
HMGXB4-206ENST00000466438 ERC2-IT1O76042 136 aa8.25□□□□□ -1.09
HMGXB4-206ENST00000466438 LAMTOR3Q9UHA4 124 aa8.25□□□□□ -1.09
HMGXB4-206ENST00000466438 TEX49A0A1B0GTD5 131 aa8.24□□□□□ -1.09
HMGXB4-206ENST00000466438 DEFB105AQ8NG35 78 aa8.24□□□□□ -1.09
HMGXB4-206ENST00000466438 SPAG11AQ6PDA7 123 aa8.23□□□□□ -1.09
HMGXB4-206ENST00000466438 ST20-AS1Q8NBB2 130 aa8.22□□□□□ -1.09
HMGXB4-206ENST00000466438 F8WEM9 126 aa8.21□□□□□ -1.1
HMGXB4-206ENST00000466438 J3QR89 54 aa8.21□□□□□ -1.1
HMGXB4-206ENST00000466438 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.1
HMGXB4-206ENST00000466438 Q8N377 158 aa8.21□□□□□ -1.1
HMGXB4-206ENST00000466438 SSPOA2VEC9 5147 aa8.21□□□□□ -1.1
HMGXB4-206ENST00000466438 M0R2T5 61 aa8.2□□□□□ -1.1
HMGXB4-206ENST00000466438 SPRR1BP22528 89 aa8.19□□□□□ -1.1
HMGXB4-206ENST00000466438 RBM3P98179 157 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-206ENST00000466438 USH2AO75445 5202 aa8.19□□□□□ -1.1
HMGXB4-206ENST00000466438 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
HMGXB4-206ENST00000466438 OBSCN-AS1Q96MR7 158 aa8.18□□□□□ -1.1
HMGXB4-206ENST00000466438 SPRR4Q96PI1 79 aa8.18□□□□□ -1.1
HMGXB4-206ENST00000466438 K7ERU9 68 aa8.17□□□□□ -1.1
HMGXB4-206ENST00000466438 C3orf22Q8N5N4 141 aa8.17□□□□□ -1.1
HMGXB4-206ENST00000466438 DSCR8Q96T75 97 aa8.17□□□□□ -1.1
HMGXB4-206ENST00000466438 FCGBPQ9Y6R7 5405 aaPredicted RBP8.17□□□□□ -1.1
HMGXB4-206ENST00000466438 PDE6GP18545 87 aa8.16□□□□□ -1.1
HMGXB4-206ENST00000466438 A0A1B0GV72 72 aa8.15□□□□□ -1.1
HMGXB4-206ENST00000466438 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
HMGXB4-206ENST00000466438 C14orf132Q9NPU4 83 aa8.15□□□□□ -1.1
HMGXB4-206ENST00000466438 SYNE2Q8WXH0 6885 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-206ENST00000466438 LOC100996750A0A140TA64 210 aa8.14□□□□□ -1.11
HMGXB4-206ENST00000466438 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
HMGXB4-206ENST00000466438 LOC110117498A0A087WWA1 95 aa8.13□□□□□ -1.11
HMGXB4-206ENST00000466438 SMIM29Q86T20 159 aa8.12□□□□□ -1.11
HMGXB4-206ENST00000466438 TRBV7-4A0A0J9YYF1 115 aa8.11□□□□□ -1.11
HMGXB4-206ENST00000466438 FLGP20930 4061 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-206ENST00000466438 Q6JHZ5 121 aa8.1□□□□□ -1.11
HMGXB4-206ENST00000466438 IGLV8-61A0A075B6I0 122 aa8.09□□□□□ -1.11
HMGXB4-206ENST00000466438 FAM240AA0A1B0GVK7 77 aa8.09□□□□□ -1.11
HMGXB4-206ENST00000466438 Q6ZQT0 140 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms