RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ANKRD36CQ5JPF3 1778 aa-1.3□□□□□ -2.62
LRCH3-211ENST00000466054 QSER1Q2KHR3 1735 aa-1.3□□□□□ -2.62
LRCH3-211ENST00000466054 ABCA3Q99758 1704 aa-1.3□□□□□ -2.62
LRCH3-211ENST00000466054 USP32Q8NFA0 1604 aa-1.3□□□□□ -2.62
LRCH3-211ENST00000466054 ZNF831Q5JPB2 1677 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 CEP350Q5VT06 3117 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 A0A0G2JND7 137 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 TRBV7-7A0A0K0K1E9 115 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 LINC01546A6NGU7 62 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 H0Y9P7 68 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 NDUFA3O95167 84 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 ASIPP42127 132 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 GTF2H5Q6ZYL4 71 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 KIF20BQ96Q89 1820 aa-1.31□□□□□ -2.62
LRCH3-211ENST00000466054 SHPRHQ149N8 1683 aa-1.32□□□□□ -2.62
LRCH3-211ENST00000466054 DEPDC5O75140 1603 aa-1.32□□□□□ -2.62
LRCH3-211ENST00000466054 RPS29P62273 56 aaKnown RBP-1.32□□□□□ -2.62
LRCH3-211ENST00000466054 HSD52Q0P140 79 aa-1.32□□□□□ -2.62
LRCH3-211ENST00000466054 FAM135AQ9P2D6 1515 aa-1.32□□□□□ -2.62
LRCH3-211ENST00000466054 ATP7BP35670 1465 aa-1.32□□□□□ -2.62
LRCH3-211ENST00000466054 NDUFC1O43677 76 aa-1.33□□□□□ -2.62
LRCH3-211ENST00000466054 MON2Q7Z3U7 1717 aa-1.33□□□□□ -2.62
LRCH3-211ENST00000466054 TOGARAM1Q9Y4F4 1720 aa-1.33□□□□□ -2.62
LRCH3-211ENST00000466054 CRYBG1Q9Y4K1 1723 aa-1.33□□□□□ -2.62
LRCH3-211ENST00000466054 PRDM15P57071 1507 aaPredicted RBP-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 PARP4Q9UKK3 1724 aaKnown RBP-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 WIZO95785 1651 aa-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 C5P01031 1676 aa-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 LRRC9Q6ZRR7 1453 aa-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 TRBV25-1A0A075B6N4 114 aa-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 C3orf79P0CE67 100 aa-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 DEFB107AQ8IZN7 70 aa-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 CACFD1Q9UGQ2 172 aa-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 SMARCA2P51531 1590 aa-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 SZT2Q5T011 3432 aa-1.34□□□□□ -2.62
LRCH3-211ENST00000466054 NESP48681 1621 aa-1.35□□□□□ -2.63
LRCH3-211ENST00000466054 LINC00158P58513 81 aa-1.35□□□□□ -2.63
LRCH3-211ENST00000466054 RPL38P63173 70 aaKnown RBP-1.35□□□□□ -2.63
LRCH3-211ENST00000466054 GNGT1P63211 74 aa-1.35□□□□□ -2.63
LRCH3-211ENST00000466054 PMCHL1Q16048 86 aa-1.35□□□□□ -2.63
LRCH3-211ENST00000466054 PSMG4Q5JS54 123 aa-1.35□□□□□ -2.63
LRCH3-211ENST00000466054 PRO3102Q9H379 93 aa-1.35□□□□□ -2.63
LRCH3-211ENST00000466054 LY75O60449 1722 aa-1.35□□□□□ -2.63
LRCH3-211ENST00000466054 WDFY4Q6ZS81 3184 aa-1.36□□□□□ -2.63
LRCH3-211ENST00000466054 ARMS2P0C7Q2 107 aa-1.36□□□□□ -2.63
LRCH3-211ENST00000466054 SAMD9Q5K651 1589 aa-1.36□□□□□ -2.63
LRCH3-211ENST00000466054 PKD1L3Q7Z443 1732 aa-1.36□□□□□ -2.63
LRCH3-211ENST00000466054 TMEM131LA2VDJ0 1609 aa-1.37□□□□□ -2.63
LRCH3-211ENST00000466054 IGLV5-48A0A075B6I7 105 aa-1.37□□□□□ -2.63
LRCH3-211ENST00000466054 IAPPP10997 89 aa-1.37□□□□□ -2.63
LRCH3-211ENST00000466054 AP4S1Q9Y587 144 aa-1.37□□□□□ -2.63
LRCH3-211ENST00000466054 UBR3Q6ZT12 1888 aa-1.37□□□□□ -2.63
LRCH3-211ENST00000466054 MLH3Q9UHC1 1453 aa-1.37□□□□□ -2.63
LRCH3-211ENST00000466054 MAST1Q9Y2H9 1570 aa-1.38□□□□□ -2.63
LRCH3-211ENST00000466054 FRYLO94915 3013 aa-1.38□□□□□ -2.63
LRCH3-211ENST00000466054 LINC00587B1AMM8 73 aa-1.38□□□□□ -2.63
LRCH3-211ENST00000466054 SARNPP82979 210 aaKnown RBP-1.38□□□□□ -2.63
LRCH3-211ENST00000466054 SERP2Q8N6R1 65 aa-1.38□□□□□ -2.63
LRCH3-211ENST00000466054 PCNTO95613 3336 aa-1.38□□□□□ -2.63
LRCH3-211ENST00000466054 PLCH1Q4KWH8 1693 aa-1.39□□□□□ -2.63
LRCH3-211ENST00000466054 LYNX1G3V0Z9 82 aa-1.39□□□□□ -2.63
LRCH3-211ENST00000466054 DEFB130BP0DP73 79 aa-1.39□□□□□ -2.63
LRCH3-211ENST00000466054 DEFB130AP0DP74 79 aa-1.39□□□□□ -2.63
LRCH3-211ENST00000466054 COX7BP24311 80 aa-1.39□□□□□ -2.63
LRCH3-211ENST00000466054 TRGV9Q99603 122 aa-1.39□□□□□ -2.63
LRCH3-211ENST00000466054 EP400Q96L91 3159 aa-1.39□□□□□ -2.63
LRCH3-211ENST00000466054 MKI67P46013 3256 aaKnown RBP-1.39□□□□□ -2.63
LRCH3-211ENST00000466054 MUC3AQ02505 3323 aa-1.4□□□□□ -2.63
LRCH3-211ENST00000466054 SUPT6HQ7KZ85 1726 aaKnown RBP-1.4□□□□□ -2.63
LRCH3-211ENST00000466054 F8WEM9 126 aa-1.4□□□□□ -2.63
LRCH3-211ENST00000466054 MPC2O95563 127 aa-1.4□□□□□ -2.63
LRCH3-211ENST00000466054 S100PP25815 95 aa-1.4□□□□□ -2.63
LRCH3-211ENST00000466054 TEX14Q8IWB6 1497 aa-1.4□□□□□ -2.63
LRCH3-211ENST00000466054 NWD1Q149M9 1564 aa-1.4□□□□□ -2.63
LRCH3-211ENST00000466054 ITSN2Q9NZM3 1697 aa-1.4□□□□□ -2.63
LRCH3-211ENST00000466054 POLR1AO95602 1720 aaPredicted RBP-1.4□□□□□ -2.63
LRCH3-211ENST00000466054 A0A1B0GUL6 1792 aa-1.41□□□□□ -2.63
LRCH3-211ENST00000466054 DNMBPQ6XZF7 1577 aa-1.41□□□□□ -2.63
LRCH3-211ENST00000466054 THOC2Q8NI27 1593 aaKnown RBP-1.41□□□□□ -2.63
LRCH3-211ENST00000466054 MT-ATP8P03928 68 aa-1.41□□□□□ -2.64
LRCH3-211ENST00000466054 IFI6P09912 130 aa-1.41□□□□□ -2.64
LRCH3-211ENST00000466054 DEFB136Q30KP8 78 aa-1.41□□□□□ -2.64
LRCH3-211ENST00000466054 NOP10Q9NPE3 64 aaKnown RBP-1.41□□□□□ -2.64
LRCH3-211ENST00000466054 ABCC2Q92887 1545 aa-1.41□□□□□ -2.64
LRCH3-211ENST00000466054 DNAH14Q0VDD8 3507 aa-1.41□□□□□ -2.64
LRCH3-211ENST00000466054 C20orf202A1L168 122 aa-1.42□□□□□ -2.64
LRCH3-211ENST00000466054 GNGT2O14610 69 aa-1.42□□□□□ -2.64
LRCH3-211ENST00000466054 ZFYVE16Q7Z3T8 1539 aa-1.42□□□□□ -2.64
LRCH3-211ENST00000466054 LRRC7Q96NW7 1537 aa-1.42□□□□□ -2.64
LRCH3-211ENST00000466054 KIF1AQ12756 1690 aa-1.42□□□□□ -2.64
LRCH3-211ENST00000466054 UQCRHP07919 91 aa-1.43□□□□□ -2.64
LRCH3-211ENST00000466054 ERVK-7P63135 1459 aa-1.43□□□□□ -2.64
LRCH3-211ENST00000466054 DCHS1Q96JQ0 3298 aa-1.44□□□□□ -2.64
LRCH3-211ENST00000466054 KIAA0586Q9BVV6 1533 aa-1.44□□□□□ -2.64
LRCH3-211ENST00000466054 A8MTW9 85 aa-1.44□□□□□ -2.64
LRCH3-211ENST00000466054 SPART-AS1P0CW21 52 aa-1.44□□□□□ -2.64
LRCH3-211ENST00000466054 LRRIQ1Q96JM4 1722 aa-1.44□□□□□ -2.64
LRCH3-211ENST00000466054 RAPGEF2Q9Y4G8 1499 aa-1.44□□□□□ -2.64
LRCH3-211ENST00000466054 ANKRD36BQ8N2N9 1353 aa-1.45□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms