RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	IGHV7-4-1	A0A0J9YVY3	117 aa		3.1	□□□□□ -1.91
CACNA1C-223	ENST00000465278	hDV103S1	A0JD37	113 aa		3.1	□□□□□ -1.91
CACNA1C-223	ENST00000465278	C11orf86	A6NJI1	115 aa		3.1	□□□□□ -1.91
CACNA1C-223	ENST00000465278	ZNF815P	A8K554	130 aa		3.1	□□□□□ -1.91
CACNA1C-223	ENST00000465278		A8MTW9	85 aa		3.1	□□□□□ -1.91
CACNA1C-223	ENST00000465278	DNAL4	O96015	105 aa		3.1	□□□□□ -1.91
CACNA1C-223	ENST00000465278	PRNT	Q86SH4	94 aa		3.1	□□□□□ -1.91
CACNA1C-223	ENST00000465278	CLEC2B	Q92478	149 aa		3.1	□□□□□ -1.91
CACNA1C-223	ENST00000465278	OBSCN-AS1	Q96MR7	158 aa		3.1	□□□□□ -1.91
CACNA1C-223	ENST00000465278		M0R3E3	92 aa		3.09	□□□□□ -1.91
CACNA1C-223	ENST00000465278	LINC00322	Q6ZN03	302 aa	Predicted RBP	3.09	□□□□□ -1.91
CACNA1C-223	ENST00000465278	CDC42SE1	Q9NRR8	79 aa		3.09	□□□□□ -1.91
CACNA1C-223	ENST00000465278	KLK12	Q9UKR0	248 aa		3.09	□□□□□ -1.91
CACNA1C-223	ENST00000465278	LENEP	Q9Y5L5	61 aa		3.09	□□□□□ -1.91
CACNA1C-223	ENST00000465278	ICOS	Q9Y6W8	199 aa		3.09	□□□□□ -1.91
CACNA1C-223	ENST00000465278	TRBV7-4	A0A0J9YYF1	115 aa		3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGHV3-11	P01762	117 aa		3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278	CRIP1	P50238	77 aa		3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278		Q86TA4	180 aa		3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278	SCGB3A1	Q96QR1	104 aa		3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278	LINC00467	Q9BRT7	94 aa		3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278	RHPN1-AS1	Q9BWJ2	59 aa		3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278	NDUFA12	Q9UI09	145 aa		3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278	LPA	P08519	4548 aa		3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278	MACF1	Q9UPN3	7388 aa	Known RBP	3.08	□□□□□ -1.92
CACNA1C-223	ENST00000465278	TRAV22	A0A0B4J277	110 aa		3.07	□□□□□ -1.92
CACNA1C-223	ENST00000465278	CNFN	Q9BYD5	112 aa		3.07	□□□□□ -1.92
CACNA1C-223	ENST00000465278	GPR98	Q8WXG9	6306 aa		3.07	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGHV3OR16-8	A0A075B7F1	116 aa		3.06	□□□□□ -1.92
CACNA1C-223	ENST00000465278	LOC101927531	A0A1B0GV80	90 aa		3.06	□□□□□ -1.92
CACNA1C-223	ENST00000465278	ZNF138	P52744	262 aa		3.06	□□□□□ -1.92
CACNA1C-223	ENST00000465278	DEFB114	Q30KQ6	69 aa		3.06	□□□□□ -1.92
CACNA1C-223	ENST00000465278	C9orf116	Q5BN46	136 aa	Predicted RBP	3.06	□□□□□ -1.92
CACNA1C-223	ENST00000465278	SOSTDC1	Q6X4U4	206 aa		3.06	□□□□□ -1.92
CACNA1C-223	ENST00000465278	ZFAND2A	Q8N6M9	145 aa		3.06	□□□□□ -1.92
CACNA1C-223	ENST00000465278	DEFB104A	Q8WTQ1	72 aa		3.06	□□□□□ -1.92
CACNA1C-223	ENST00000465278	TTTY13	Q9BZ97	58 aa		3.06	□□□□□ -1.92
CACNA1C-223	ENST00000465278	USH2A	O75445	5202 aa		3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	TRBV6-8	A0A0A6YYG3	113 aa		3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGHV3-74	A0A0B4J1X5	117 aa		3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGHV3-66	A0A0C4DH42	116 aa		3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGIP	A6NJ69	53 aa		3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278		D6R8Y8	96 aa		3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	HCG22	E2RYF7	251 aa		3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	FXYD7	P58549	80 aa		3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	ELOF1	P60002	83 aa	Known RBP	3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	FAM229B	Q4G0N7	80 aa		3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.05	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	3.04	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGHV3-49	A0A0A0MS15	119 aa		3.04	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGKV2D-40	P01614	121 aa	Predicted RBP	3.04	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGLV1-51	P01701	117 aa		3.04	□□□□□ -1.92
CACNA1C-223	ENST00000465278	SMR3B	P02814	79 aa	Predicted RBP	3.04	□□□□□ -1.92
CACNA1C-223	ENST00000465278	RPL28	P46779	137 aa	Known RBP	3.04	□□□□□ -1.92
CACNA1C-223	ENST00000465278	DEFB136	Q30KP8	78 aa		3.04	□□□□□ -1.92
CACNA1C-223	ENST00000465278		Q5VV11	94 aa		3.04	□□□□□ -1.92
CACNA1C-223	ENST00000465278	TMEM254	Q8TBM7	123 aa		3.04	□□□□□ -1.92
CACNA1C-223	ENST00000465278	IGLV2-18	A0A075B6J9	118 aa		3.03	□□□□□ -1.92
CACNA1C-223	ENST00000465278	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.03	□□□□□ -1.92
CACNA1C-223	ENST00000465278		M0R2N4	97 aa		3.03	□□□□□ -1.92
CACNA1C-223	ENST00000465278	LEPROT	O15243	131 aa		3.03	□□□□□ -1.92
CACNA1C-223	ENST00000465278	PRR9	Q5T870	116 aa		3.03	□□□□□ -1.92
CACNA1C-223	ENST00000465278	SFTA2	Q6UW10	78 aa		3.03	□□□□□ -1.92
CACNA1C-223	ENST00000465278	UBL5	Q9BZL1	73 aa		3.03	□□□□□ -1.92
CACNA1C-223	ENST00000465278	CDC42SE2	Q9NRR3	84 aa		3.03	□□□□□ -1.92
CACNA1C-223	ENST00000465278		A0A087WVE0	104 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	IGKV3D-7	A0A0C4DH55	119 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278		I3L3M4	83 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	NDUFB1	O75438	58 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	ARMS2	P0C7Q2	107 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	BAALC-AS2	P0C853	105 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	FAM74A4	Q5TZK3	123 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	CASC2	Q6XLA1	102 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278		Q8TAT8	98 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	AMELX	Q99217	191 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	LINC00846	Q9NV44	126 aa		3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.02	□□□□□ -1.93
CACNA1C-223	ENST00000465278	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	3.01	□□□□□ -1.93
CACNA1C-223	ENST00000465278	TRAV23DV6	A0A075B6W5	121 aa		3.01	□□□□□ -1.93
CACNA1C-223	ENST00000465278	TRAV21	A0A0B4J279	112 aa		3.01	□□□□□ -1.93
CACNA1C-223	ENST00000465278	PSCA	O43653	123 aa		3.01	□□□□□ -1.93
CACNA1C-223	ENST00000465278	RNASE3	P12724	160 aa	Known RBP	3.01	□□□□□ -1.93
CACNA1C-223	ENST00000465278	CMC4	P56277	68 aa	Predicted RBP	3.01	□□□□□ -1.93
CACNA1C-223	ENST00000465278	DEFB1	P60022	68 aa		3.01	□□□□□ -1.93
CACNA1C-223	ENST00000465278	MUSTN1	Q8IVN3	82 aa		3.01	□□□□□ -1.93
CACNA1C-223	ENST00000465278	IGLV4-69	A0A075B6H9	119 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278		H0YGX0	51 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278		H3BQ85	93 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278	CHKB-CPT1B	H3BT56	60 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278	PDE6G	P18545	87 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278	LINC00315	P59091	139 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278	DEFB131A	P59861	70 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278	LYZL1	Q6UWQ5	148 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278	CAMK2N1	Q7Z7J9	78 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278	SPTSSB	Q8NFR3	76 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278		Q9BRP9	147 aa		3	□□□□□ -1.93
CACNA1C-223	ENST00000465278	MIA	Q16674	131 aa		2.99	□□□□□ -1.93
CACNA1C-223	ENST00000465278	C1orf134	Q5TEV5	83 aa		2.99	□□□□□ -1.93
CACNA1C-223	ENST00000465278	RETNLB	Q9BQ08	111 aa		2.99	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms