RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CFC1P0CG37 223 aa10.29□□□□□ -0.76
SF3A1-205ENST00000463818 A0A0G2JQZ4 141 aa10.27□□□□□ -0.77
SF3A1-205ENST00000463818 CEND1Q8N111 149 aa10.27□□□□□ -0.77
SF3A1-205ENST00000463818 C12orf57Q99622 126 aa10.27□□□□□ -0.77
SF3A1-205ENST00000463818 NHP2Q9NX24 153 aaKnown RBP10.27□□□□□ -0.77
SF3A1-205ENST00000463818 PCOTHQ58A44 107 aa10.26□□□□□ -0.77
SF3A1-205ENST00000463818 Q5XG85 94 aa10.25□□□□□ -0.77
SF3A1-205ENST00000463818 VAMP3Q15836 100 aa10.24□□□□□ -0.77
SF3A1-205ENST00000463818 UQCR10Q9UDW1 63 aa10.24□□□□□ -0.77
SF3A1-205ENST00000463818 TMEM238LA0A1B0GVL6 79 aa10.23□□□□□ -0.77
SF3A1-205ENST00000463818 A6NJY4 79 aa10.23□□□□□ -0.77
SF3A1-205ENST00000463818 HSD52Q0P140 79 aa10.23□□□□□ -0.77
SF3A1-205ENST00000463818 C1orf195Q5TG92 126 aa10.23□□□□□ -0.77
SF3A1-205ENST00000463818 LINC00575Q6W349 94 aa10.23□□□□□ -0.77
SF3A1-205ENST00000463818 FXYD2P54710 66 aa10.22□□□□□ -0.77
SF3A1-205ENST00000463818 BVES-AS1Q5T3Y7 98 aa10.22□□□□□ -0.77
SF3A1-205ENST00000463818 IGLV8-61A0A075B6I0 122 aa10.21□□□□□ -0.77
SF3A1-205ENST00000463818 SMIM6P0DI80 62 aa10.2□□□□□ -0.78
SF3A1-205ENST00000463818 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
SF3A1-205ENST00000463818 RAB37Q96AX2 223 aa10.2□□□□□ -0.78
SF3A1-205ENST00000463818 KRTAP9-6A0A140TA67 174 aa10.18□□□□□ -0.78
SF3A1-205ENST00000463818 PRO1854Q9UHT4 67 aa10.18□□□□□ -0.78
SF3A1-205ENST00000463818 hADV29S1A0JD25 119 aa10.16□□□□□ -0.78
SF3A1-205ENST00000463818 KRTAP19-2Q3LHN2 52 aa10.16□□□□□ -0.78
SF3A1-205ENST00000463818 F8WEM9 126 aa10.14□□□□□ -0.79
SF3A1-205ENST00000463818 TCL1BO95988 128 aa10.14□□□□□ -0.79
SF3A1-205ENST00000463818 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-205ENST00000463818 H0YGX0 51 aa10.13□□□□□ -0.79
SF3A1-205ENST00000463818 Q6ZQY7 126 aa10.13□□□□□ -0.79
SF3A1-205ENST00000463818 PPDPFLQ8WWR9 84 aa10.12□□□□□ -0.79
SF3A1-205ENST00000463818 LOC105371267A0A1B0GV96 52 aa10.1□□□□□ -0.79
SF3A1-205ENST00000463818 A0A1B0GX51 115 aa10.1□□□□□ -0.79
SF3A1-205ENST00000463818 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-205ENST00000463818 RPL37P61927 97 aaKnown RBP10.08□□□□□ -0.8
SF3A1-205ENST00000463818 MT1HP80294 61 aa10.08□□□□□ -0.8
SF3A1-205ENST00000463818 FAM218AQ96MZ4 157 aa10.08□□□□□ -0.8
SF3A1-205ENST00000463818 TRIAP1O43715 76 aa10.07□□□□□ -0.8
SF3A1-205ENST00000463818 OCIAD2Q56VL3 154 aa10.07□□□□□ -0.8
SF3A1-205ENST00000463818 Q6JHZ5 121 aa10.07□□□□□ -0.8
SF3A1-205ENST00000463818 K7ERJ3 54 aa10.06□□□□□ -0.8
SF3A1-205ENST00000463818 IGFL1Q6UW32 110 aa10.05□□□□□ -0.8
SF3A1-205ENST00000463818 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
SF3A1-205ENST00000463818 CLEC2BQ92478 149 aa10.04□□□□□ -0.8
SF3A1-205ENST00000463818 SNCGO76070 127 aa10.03□□□□□ -0.8
SF3A1-205ENST00000463818 SNHG12Q9BXW3 62 aa10.01□□□□□ -0.81
SF3A1-205ENST00000463818 M0R143 59 aa9.98□□□□□ -0.81
SF3A1-205ENST00000463818 GHRHP01286 108 aa9.98□□□□□ -0.81
SF3A1-205ENST00000463818 TSTD3H0UI37 97 aa9.97□□□□□ -0.81
SF3A1-205ENST00000463818 H3BUT2 72 aa9.96□□□□□ -0.82
SF3A1-205ENST00000463818 COX6CP09669 75 aa9.96□□□□□ -0.82
SF3A1-205ENST00000463818 PSMB2P49721 201 aa9.95□□□□□ -0.82
SF3A1-205ENST00000463818 COX6B2Q6YFQ2 88 aa9.93□□□□□ -0.82
SF3A1-205ENST00000463818 OBSCN-AS1Q96MR7 158 aa9.93□□□□□ -0.82
SF3A1-205ENST00000463818 H3BQ85 93 aa9.92□□□□□ -0.82
SF3A1-205ENST00000463818 LST1O00453 97 aa9.92□□□□□ -0.82
SF3A1-205ENST00000463818 NDUFV3P56181 108 aaKnown RBP9.91□□□□□ -0.82
SF3A1-205ENST00000463818 KRTAP10-6P60371 365 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-205ENST00000463818 M0R2T5 61 aa9.9□□□□□ -0.82
SF3A1-205ENST00000463818 DNAL4O96015 105 aa9.9□□□□□ -0.82
SF3A1-205ENST00000463818 TRACP01848 142 aa9.9□□□□□ -0.82
SF3A1-205ENST00000463818 LORP23490 312 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-205ENST00000463818 Q6Q795 121 aa9.9□□□□□ -0.82
SF3A1-205ENST00000463818 CRCT1Q9UGL9 99 aa9.9□□□□□ -0.82
SF3A1-205ENST00000463818 ATP11AUNQ6ZP68 121 aa9.89□□□□□ -0.83
SF3A1-205ENST00000463818 Q75L30 129 aa9.88□□□□□ -0.83
SF3A1-205ENST00000463818 ORMDL1Q9P0S3 153 aa9.88□□□□□ -0.83
SF3A1-205ENST00000463818 TMEM256-PLSCR3K7ERE1 68 aa9.85□□□□□ -0.83
SF3A1-205ENST00000463818 Q96NJ1 140 aa9.85□□□□□ -0.83
SF3A1-205ENST00000463818 H3BMG7 143 aa9.84□□□□□ -0.83
SF3A1-205ENST00000463818 TEN1Q86WV5 123 aa9.84□□□□□ -0.83
SF3A1-205ENST00000463818 SS18L2Q9UHA2 77 aa9.84□□□□□ -0.83
SF3A1-205ENST00000463818 FABP2P12104 132 aa9.83□□□□□ -0.84
SF3A1-205ENST00000463818 SCGB1C2P0DMR2 95 aa9.82□□□□□ -0.84
SF3A1-205ENST00000463818 UBE2V1Q13404 147 aa9.82□□□□□ -0.84
SF3A1-205ENST00000463818 FLGP20930 4061 aaPredicted RBP9.82□□□□□ -0.84
SF3A1-205ENST00000463818 FSIP2Q5CZC0 6907 aa9.81□□□□□ -0.84
SF3A1-205ENST00000463818 A0A087WSZ3 146 aa9.79□□□□□ -0.84
SF3A1-205ENST00000463818 ATXN8Q156A1 80 aa9.76□□□□□ -0.85
SF3A1-205ENST00000463818 C20orf166-AS1Q96NR2 134 aa9.76□□□□□ -0.85
SF3A1-205ENST00000463818 A0A1W2PNM2 257 aa9.75□□□□□ -0.85
SF3A1-205ENST00000463818 LYRM7Q5U5X0 104 aa9.75□□□□□ -0.85
SF3A1-205ENST00000463818 NAA38Q9BRA0 125 aaKnown RBP9.75□□□□□ -0.85
SF3A1-205ENST00000463818 A8MUU9 505 aa9.74□□□□□ -0.85
SF3A1-205ENST00000463818 TRBV7-4A0A0J9YYF1 115 aa9.73□□□□□ -0.85
SF3A1-205ENST00000463818 TRBV20-1A0A075B6N2 111 aa9.72□□□□□ -0.85
SF3A1-205ENST00000463818 BATFQ16520 125 aa9.72□□□□□ -0.85
SF3A1-205ENST00000463818 ANKRD29Q8N6D5 301 aa9.72□□□□□ -0.85
SF3A1-205ENST00000463818 TAX1BP3O14907 124 aa9.71□□□□□ -0.86
SF3A1-205ENST00000463818 C9orf118A6NHY6 69 aa9.7□□□□□ -0.86
SF3A1-205ENST00000463818 BAALC-AS2P0C853 105 aa9.7□□□□□ -0.86
SF3A1-205ENST00000463818 DSCR10P59022 87 aa9.7□□□□□ -0.86
SF3A1-205ENST00000463818 RBM3P98179 157 aaKnown RBP9.67□□□□□ -0.86
SF3A1-205ENST00000463818 SIGMAR1Q99720 223 aa9.66□□□□□ -0.86
SF3A1-205ENST00000463818 A0A1W2PPM0 123 aa9.65□□□□□ -0.86
SF3A1-205ENST00000463818 CCKP06307 115 aa9.65□□□□□ -0.86
SF3A1-205ENST00000463818 A0A1B0GV72 72 aa9.64□□□□□ -0.87
SF3A1-205ENST00000463818 JMJD7-PLA2G4BH0Y9G9 81 aa9.63□□□□□ -0.87
SF3A1-205ENST00000463818 IGKV4-1P06312 121 aa9.63□□□□□ -0.87
SF3A1-205ENST00000463818 LINC00313P59037 77 aa9.63□□□□□ -0.87
SF3A1-205ENST00000463818 DSCR8Q96T75 97 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms