RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 HAMPP81172 84 aa4.49□□□□□ -1.69
EPHA4-210ENST00000463446 RBM3P98179 157 aaKnown RBP4.49□□□□□ -1.69
EPHA4-210ENST00000463446 LINC00483Q53H64 154 aa4.49□□□□□ -1.69
EPHA4-210ENST00000463446 LINC01600Q96MT4 127 aa4.49□□□□□ -1.69
EPHA4-210ENST00000463446 FAM218AQ96MZ4 157 aa4.49□□□□□ -1.69
EPHA4-210ENST00000463446 DSCR8Q96T75 97 aa4.49□□□□□ -1.69
EPHA4-210ENST00000463446 NAA38Q9BRA0 125 aaKnown RBP4.49□□□□□ -1.69
EPHA4-210ENST00000463446 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
EPHA4-210ENST00000463446 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
EPHA4-210ENST00000463446 OXTP01178 125 aa4.48□□□□□ -1.69
EPHA4-210ENST00000463446 SPAG11AQ6PDA7 123 aa4.48□□□□□ -1.69
EPHA4-210ENST00000463446 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
EPHA4-210ENST00000463446 DNAH2Q9P225 4427 aa4.48□□□□□ -1.69
EPHA4-210ENST00000463446 ERC2-IT1O76042 136 aa4.47□□□□□ -1.69
EPHA4-210ENST00000463446 Q8N377 158 aa4.47□□□□□ -1.69
EPHA4-210ENST00000463446 PCLOQ9Y6V0 5065 aa4.47□□□□□ -1.69
EPHA4-210ENST00000463446 DNAH10Q8IVF4 4471 aa4.46□□□□□ -1.7
EPHA4-210ENST00000463446 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
EPHA4-210ENST00000463446 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
EPHA4-210ENST00000463446 J3QR89 54 aa4.45□□□□□ -1.7
EPHA4-210ENST00000463446 CD164Q04900 197 aa4.45□□□□□ -1.7
EPHA4-210ENST00000463446 ST20-AS1Q8NBB2 130 aa4.45□□□□□ -1.7
EPHA4-210ENST00000463446 Q8NBF4 154 aa4.45□□□□□ -1.7
EPHA4-210ENST00000463446 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
EPHA4-210ENST00000463446 TYMSOSQ8TAI1 123 aa4.45□□□□□ -1.7
EPHA4-210ENST00000463446 PKD1P98161 4303 aa4.44□□□□□ -1.7
EPHA4-210ENST00000463446 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
EPHA4-210ENST00000463446 C9orf153Q5TBE3 101 aa4.44□□□□□ -1.7
EPHA4-210ENST00000463446 RYR2Q92736 4967 aa4.44□□□□□ -1.7
EPHA4-210ENST00000463446 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
EPHA4-210ENST00000463446 IGLV9-49A0A0B4J1Y8 123 aa4.43□□□□□ -1.7
EPHA4-210ENST00000463446 A0A1B0GV90 55 aa4.43□□□□□ -1.7
EPHA4-210ENST00000463446 LINC01547P58512 204 aaPredicted RBP4.43□□□□□ -1.7
EPHA4-210ENST00000463446 TEN1Q86WV5 123 aa4.43□□□□□ -1.7
EPHA4-210ENST00000463446 FAT2Q9NYQ8 4349 aa4.42□□□□□ -1.7
EPHA4-210ENST00000463446 SPINK1P00995 79 aa4.42□□□□□ -1.7
EPHA4-210ENST00000463446 ACYP1P07311 99 aa4.42□□□□□ -1.7
EPHA4-210ENST00000463446 Q6Q795 121 aa4.42□□□□□ -1.7
EPHA4-210ENST00000463446 LOC110117498A0A087WWA1 95 aa4.41□□□□□ -1.7
EPHA4-210ENST00000463446 TRBV7-4A0A0J9YYF1 115 aa4.41□□□□□ -1.7
EPHA4-210ENST00000463446 RPS29P62273 56 aaKnown RBP4.41□□□□□ -1.7
EPHA4-210ENST00000463446 SMIM29Q86T20 159 aa4.41□□□□□ -1.7
EPHA4-210ENST00000463446 OBSCN-AS1Q96MR7 158 aa4.41□□□□□ -1.7
EPHA4-210ENST00000463446 LIMD2Q9BT23 127 aa4.41□□□□□ -1.7
EPHA4-210ENST00000463446 SS18L2Q9UHA2 77 aa4.41□□□□□ -1.7
EPHA4-210ENST00000463446 RYR1P21817 5038 aa4.4□□□□□ -1.7
EPHA4-210ENST00000463446 KRTAP29-1A8MX34 341 aaPredicted RBP4.4□□□□□ -1.71
EPHA4-210ENST00000463446 KRTAP1-4P0C5Y4 121 aa4.4□□□□□ -1.71
EPHA4-210ENST00000463446 MOBPQ13875 183 aa4.4□□□□□ -1.71
EPHA4-210ENST00000463446 PRO0461Q9UI25 63 aa4.4□□□□□ -1.71
EPHA4-210ENST00000463446 CCKP06307 115 aa4.39□□□□□ -1.71
EPHA4-210ENST00000463446 ETDBQ3ZM63 59 aa4.38□□□□□ -1.71
EPHA4-210ENST00000463446 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
EPHA4-210ENST00000463446 Q5XG85 94 aa4.37□□□□□ -1.71
EPHA4-210ENST00000463446 IGFL1Q6UW32 110 aa4.37□□□□□ -1.71
EPHA4-210ENST00000463446 C3orf22Q8N5N4 141 aa4.37□□□□□ -1.71
EPHA4-210ENST00000463446 PRR26Q8N8Z3 221 aa4.37□□□□□ -1.71
EPHA4-210ENST00000463446 LINC00304Q8N9R0 145 aa4.37□□□□□ -1.71
EPHA4-210ENST00000463446 ANAPC11Q9NYG5 84 aa4.37□□□□□ -1.71
EPHA4-210ENST00000463446 HECTD4Q9Y4D8 3996 aa4.37□□□□□ -1.71
EPHA4-210ENST00000463446 A0A087X002 238 aa4.36□□□□□ -1.71
EPHA4-210ENST00000463446 Q6ZQT0 140 aa4.36□□□□□ -1.71
EPHA4-210ENST00000463446 VPS25Q9BRG1 176 aa4.36□□□□□ -1.71
EPHA4-210ENST00000463446 C14orf132Q9NPU4 83 aa4.36□□□□□ -1.71
EPHA4-210ENST00000463446 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
EPHA4-210ENST00000463446 FAM240AA0A1B0GVK7 77 aa4.35□□□□□ -1.71
EPHA4-210ENST00000463446 K7ERU9 68 aa4.35□□□□□ -1.71
EPHA4-210ENST00000463446 NREPQ16612 68 aa4.35□□□□□ -1.71
EPHA4-210ENST00000463446 MTURNQ8N3F0 131 aa4.35□□□□□ -1.71
EPHA4-210ENST00000463446 UBL5Q9BZL1 73 aa4.35□□□□□ -1.71
EPHA4-210ENST00000463446 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
EPHA4-210ENST00000463446 TRBV7-7A0A0K0K1E9 115 aa4.34□□□□□ -1.71
EPHA4-210ENST00000463446 J3KT08 172 aa4.34□□□□□ -1.71
EPHA4-210ENST00000463446 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.71
EPHA4-210ENST00000463446 KRTAP13-2Q52LG2 175 aa4.34□□□□□ -1.71
EPHA4-210ENST00000463446 PKHD1P08F94 4074 aa4.33□□□□□ -1.72
EPHA4-210ENST00000463446 CDIP1Q9H305 208 aa4.32□□□□□ -1.72
EPHA4-210ENST00000463446 A0A1W2PNM2 257 aa4.31□□□□□ -1.72
EPHA4-210ENST00000463446 NDUFB1O75438 58 aa4.31□□□□□ -1.72
EPHA4-210ENST00000463446 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
EPHA4-210ENST00000463446 HRCT1Q6UXD1 115 aa4.31□□□□□ -1.72
EPHA4-210ENST00000463446 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
EPHA4-210ENST00000463446 LRP1BQ9NZR2 4599 aa4.31□□□□□ -1.72
EPHA4-210ENST00000463446 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
EPHA4-210ENST00000463446 A0A087WSZ3 146 aa4.3□□□□□ -1.72
EPHA4-210ENST00000463446 A0A1B0GV72 72 aa4.3□□□□□ -1.72
EPHA4-210ENST00000463446 FP248Q71RG6 208 aaPredicted RBP4.3□□□□□ -1.72
EPHA4-210ENST00000463446 HERC2O95714 4834 aa4.3□□□□□ -1.72
EPHA4-210ENST00000463446 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
EPHA4-210ENST00000463446 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
EPHA4-210ENST00000463446 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
EPHA4-210ENST00000463446 DYNC1H1Q14204 4646 aaKnown RBP4.27□□□□□ -1.73
EPHA4-210ENST00000463446 BPY2O14599 106 aa4.27□□□□□ -1.73
EPHA4-210ENST00000463446 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
EPHA4-210ENST00000463446 KRTAP4-5Q9BYR2 181 aa4.27□□□□□ -1.73
EPHA4-210ENST00000463446 CXCL6P80162 114 aa4.26□□□□□ -1.73
EPHA4-210ENST00000463446 LINC00643Q86TS7 51 aa4.26□□□□□ -1.73
EPHA4-210ENST00000463446 MT1HL1P0DM35 61 aa4.25□□□□□ -1.73
EPHA4-210ENST00000463446 IGKV4-1P06312 121 aa4.24□□□□□ -1.73
EPHA4-210ENST00000463446 Q6ZVQ6 151 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 2118.3 ms