RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 A0A0G2JQZ4 141 aa6.27□□□□□ -1.41
MSH5-211ENST00000463144 BCE1O60756 84 aa6.27□□□□□ -1.41
MSH5-211ENST00000463144 CXCL6P80162 114 aa6.27□□□□□ -1.41
MSH5-211ENST00000463144 SCXQ7RTU7 201 aa6.27□□□□□ -1.41
MSH5-211ENST00000463144 DNAH11Q96DT5 4516 aa6.26□□□□□ -1.41
MSH5-211ENST00000463144 ALMS1Q8TCU4 4167 aa6.26□□□□□ -1.41
MSH5-211ENST00000463144 UBE2AP49459 152 aa6.26□□□□□ -1.41
MSH5-211ENST00000463144 Q8NBF4 154 aa6.26□□□□□ -1.41
MSH5-211ENST00000463144 IGLV5-52A0A0A0MRZ9 124 aa6.25□□□□□ -1.41
MSH5-211ENST00000463144 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
MSH5-211ENST00000463144 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
MSH5-211ENST00000463144 IGLV8-61A0A075B6I0 122 aa6.25□□□□□ -1.41
MSH5-211ENST00000463144 ATOX1O00244 68 aa6.25□□□□□ -1.41
MSH5-211ENST00000463144 SPRR1BP22528 89 aa6.25□□□□□ -1.41
MSH5-211ENST00000463144 NREPQ16612 68 aa6.25□□□□□ -1.41
MSH5-211ENST00000463144 IGFL1Q6UW32 110 aa6.25□□□□□ -1.41
MSH5-211ENST00000463144 PLAC8Q9NZF1 115 aa6.24□□□□□ -1.41
MSH5-211ENST00000463144 A0A1B0GW54 56 aa6.24□□□□□ -1.41
MSH5-211ENST00000463144 F8WEM9 126 aa6.23□□□□□ -1.41
MSH5-211ENST00000463144 CRYGAP11844 174 aa6.22□□□□□ -1.41
MSH5-211ENST00000463144 KRTAP10-2P60368 255 aa6.22□□□□□ -1.41
MSH5-211ENST00000463144 COX7CP15954 63 aa6.22□□□□□ -1.41
MSH5-211ENST00000463144 Q8N9L7 120 aa6.22□□□□□ -1.41
MSH5-211ENST00000463144 PSORS1C2Q9UIG4 136 aa6.22□□□□□ -1.41
MSH5-211ENST00000463144 PKD1P98161 4303 aa6.21□□□□□ -1.42
MSH5-211ENST00000463144 UQCRQO14949 82 aa6.2□□□□□ -1.42
MSH5-211ENST00000463144 FAT2Q9NYQ8 4349 aa6.2□□□□□ -1.42
MSH5-211ENST00000463144 BPY2O14599 106 aa6.19□□□□□ -1.42
MSH5-211ENST00000463144 IGKV4-1P06312 121 aa6.19□□□□□ -1.42
MSH5-211ENST00000463144 SERP2Q8N6R1 65 aa6.19□□□□□ -1.42
MSH5-211ENST00000463144 FAM30AQ9NZY2 134 aa6.19□□□□□ -1.42
MSH5-211ENST00000463144 C9orf153Q5TBE3 101 aa6.16□□□□□ -1.42
MSH5-211ENST00000463144 DSCR10P59022 87 aa6.16□□□□□ -1.42
MSH5-211ENST00000463144 A0A087WSZ3 146 aa6.15□□□□□ -1.42
MSH5-211ENST00000463144 LINC00483Q53H64 154 aa6.15□□□□□ -1.42
MSH5-211ENST00000463144 ZNF861PO60384 105 aa6.15□□□□□ -1.43
MSH5-211ENST00000463144 CIRBP-AS1Q8TBR5 109 aa6.15□□□□□ -1.43
MSH5-211ENST00000463144 CYSTM1Q9H1C7 97 aa6.14□□□□□ -1.43
MSH5-211ENST00000463144 SACSQ9NZJ4 4579 aa6.14□□□□□ -1.43
MSH5-211ENST00000463144 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
MSH5-211ENST00000463144 DEFB116Q30KQ4 102 aa6.13□□□□□ -1.43
MSH5-211ENST00000463144 SS18L2Q9UHA2 77 aa6.13□□□□□ -1.43
MSH5-211ENST00000463144 LCE6AA0A183 80 aa6.13□□□□□ -1.43
MSH5-211ENST00000463144 ANAPC11Q9NYG5 84 aa6.13□□□□□ -1.43
MSH5-211ENST00000463144 TRAV7A0A075B6U4 112 aa6.12□□□□□ -1.43
MSH5-211ENST00000463144 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
MSH5-211ENST00000463144 K7EQZ3 153 aa6.11□□□□□ -1.43
MSH5-211ENST00000463144 IGLV7-43P04211 117 aa6.11□□□□□ -1.43
MSH5-211ENST00000463144 Q6ZSA8 131 aa6.11□□□□□ -1.43
MSH5-211ENST00000463144 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
MSH5-211ENST00000463144 ZNF706Q9Y5V0 76 aaPredicted RBP6.1□□□□□ -1.43
MSH5-211ENST00000463144 SMIM20Q8N5G0 67 aa6.09□□□□□ -1.43
MSH5-211ENST00000463144 LINC00472Q9H8W2 130 aa6.09□□□□□ -1.44
MSH5-211ENST00000463144 RPL37AP61513 92 aaKnown RBP6.08□□□□□ -1.44
MSH5-211ENST00000463144 MOBPQ13875 183 aa6.07□□□□□ -1.44
MSH5-211ENST00000463144 C20orf197Q8N268 126 aa6.07□□□□□ -1.44
MSH5-211ENST00000463144 OCR1Q9BZK8 76 aa6.07□□□□□ -1.44
MSH5-211ENST00000463144 KMT2CQ8NEZ4 4911 aaKnown RBP6.06□□□□□ -1.44
MSH5-211ENST00000463144 HRCT1Q6UXD1 115 aa6.05□□□□□ -1.44
MSH5-211ENST00000463144 RYR2Q92736 4967 aa6.05□□□□□ -1.44
MSH5-211ENST00000463144 Q96NJ1 140 aa6.04□□□□□ -1.44
MSH5-211ENST00000463144 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
MSH5-211ENST00000463144 PKHD1P08F94 4074 aa6.03□□□□□ -1.44
MSH5-211ENST00000463144 KLKP1Q107X0 134 aa6.02□□□□□ -1.45
MSH5-211ENST00000463144 SNURFQ9Y675 71 aa6.02□□□□□ -1.45
MSH5-211ENST00000463144 A8MWP4 228 aa6.01□□□□□ -1.45
MSH5-211ENST00000463144 PRR15Q8IV56 129 aa6.01□□□□□ -1.45
MSH5-211ENST00000463144 VPS13BQ7Z7G8 4022 aa6.01□□□□□ -1.45
MSH5-211ENST00000463144 KRTAP29-1A8MX34 341 aaPredicted RBP6□□□□□ -1.45
MSH5-211ENST00000463144 WFDC13Q8IUB5 93 aa6□□□□□ -1.45
MSH5-211ENST00000463144 DYNC1H1Q14204 4646 aaKnown RBP5.99□□□□□ -1.45
MSH5-211ENST00000463144 RYR3Q15413 4870 aa5.99□□□□□ -1.45
MSH5-211ENST00000463144 H7BZZ5 65 aa5.99□□□□□ -1.45
MSH5-211ENST00000463144 TMEM254Q8TBM7 123 aa5.99□□□□□ -1.45
MSH5-211ENST00000463144 TMEM258P61165 79 aa5.99□□□□□ -1.45
MSH5-211ENST00000463144 J3KT08 172 aa5.98□□□□□ -1.45
MSH5-211ENST00000463144 C5orf47Q569G3 176 aa5.98□□□□□ -1.45
MSH5-211ENST00000463144 A0A087X002 238 aa5.97□□□□□ -1.45
MSH5-211ENST00000463144 A0A0U1RQV1 116 aa5.97□□□□□ -1.45
MSH5-211ENST00000463144 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
MSH5-211ENST00000463144 A0A1B0GVY2 172 aa5.96□□□□□ -1.45
MSH5-211ENST00000463144 LINC00336Q6ZUF6 198 aa5.96□□□□□ -1.45
MSH5-211ENST00000463144 SSBP3-AS1Q7Z2R9 100 aa5.96□□□□□ -1.45
MSH5-211ENST00000463144 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
MSH5-211ENST00000463144 CASC2Q6XLA1 102 aa5.96□□□□□ -1.46
MSH5-211ENST00000463144 KRTAP1-4P0C5Y4 121 aa5.95□□□□□ -1.46
MSH5-211ENST00000463144 NDUFB1O75438 58 aa5.94□□□□□ -1.46
MSH5-211ENST00000463144 CD164Q04900 197 aa5.94□□□□□ -1.46
MSH5-211ENST00000463144 FAM229BQ4G0N7 80 aa5.92□□□□□ -1.46
MSH5-211ENST00000463144 APOBP04114 4563 aaKnown RBP5.91□□□□□ -1.46
MSH5-211ENST00000463144 NDUFC1O43677 76 aa5.91□□□□□ -1.46
MSH5-211ENST00000463144 ASB16-AS1Q495Z4 193 aa5.91□□□□□ -1.46
MSH5-211ENST00000463144 A0A1B0GVX0 72 aa5.91□□□□□ -1.46
MSH5-211ENST00000463144 ZCCHC13Q8WW36 166 aaKnown RBP5.91□□□□□ -1.46
MSH5-211ENST00000463144 C8orf17Q9NRJ1 99 aa5.91□□□□□ -1.46
MSH5-211ENST00000463144 FAM236DA0A1B0GTK5 79 aa5.9□□□□□ -1.46
MSH5-211ENST00000463144 hDV103S1A0JD37 113 aa5.9□□□□□ -1.46
MSH5-211ENST00000463144 FAM236CP0DP71 79 aa5.9□□□□□ -1.46
MSH5-211ENST00000463144 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.46
MSH5-211ENST00000463144 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms