RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 LINC01547P58512 204 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-210ENST00000462553 ASB16-AS1Q495Z4 193 aa4.46□□□□□ -1.7
CDC42BPA-210ENST00000462553 SPATA45Q537H7 98 aa4.46□□□□□ -1.7
CDC42BPA-210ENST00000462553 SPAG11AQ6PDA7 123 aa4.46□□□□□ -1.7
CDC42BPA-210ENST00000462553 C2orf91Q6ZV80 131 aa4.46□□□□□ -1.7
CDC42BPA-210ENST00000462553 PYY3Q5JQD4 70 aa4.45□□□□□ -1.7
CDC42BPA-210ENST00000462553 FP248Q71RG6 208 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-210ENST00000462553 SSBP3-AS1Q7Z2R9 100 aa4.45□□□□□ -1.7
CDC42BPA-210ENST00000462553 C14orf144Q96I85 54 aa4.45□□□□□ -1.7
CDC42BPA-210ENST00000462553 C9orf153Q5TBE3 101 aa4.44□□□□□ -1.7
CDC42BPA-210ENST00000462553 SMIM29Q86T20 159 aa4.44□□□□□ -1.7
CDC42BPA-210ENST00000462553 C12orf57Q99622 126 aa4.44□□□□□ -1.7
CDC42BPA-210ENST00000462553 VAMP8Q9BV40 100 aa4.44□□□□□ -1.7
CDC42BPA-210ENST00000462553 HIGD1BQ9P298 99 aa4.44□□□□□ -1.7
CDC42BPA-210ENST00000462553 IGLV5-48A0A075B6I7 105 aa4.43□□□□□ -1.7
CDC42BPA-210ENST00000462553 SPINK1P00995 79 aa4.43□□□□□ -1.7
CDC42BPA-210ENST00000462553 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-210ENST00000462553 Q8N377 158 aa4.43□□□□□ -1.7
CDC42BPA-210ENST00000462553 HIST1H4GQ99525 98 aa4.43□□□□□ -1.7
CDC42BPA-210ENST00000462553 TMA7Q9Y2S6 64 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-210ENST00000462553 CFC1BP0CG36 223 aa4.42□□□□□ -1.7
CDC42BPA-210ENST00000462553 CFC1P0CG37 223 aa4.42□□□□□ -1.7
CDC42BPA-210ENST00000462553 SLC25A34Q6PIV7 304 aa4.42□□□□□ -1.7
CDC42BPA-210ENST00000462553 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
CDC42BPA-210ENST00000462553 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-210ENST00000462553 TEX49A0A1B0GTD5 131 aa4.41□□□□□ -1.7
CDC42BPA-210ENST00000462553 Q1RN00 199 aa4.41□□□□□ -1.7
CDC42BPA-210ENST00000462553 LINC00575Q6W349 94 aa4.41□□□□□ -1.7
CDC42BPA-210ENST00000462553 DEFB105AQ8NG35 78 aa4.41□□□□□ -1.7
CDC42BPA-210ENST00000462553 TAL2Q16559 108 aa4.4□□□□□ -1.71
CDC42BPA-210ENST00000462553 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.71
CDC42BPA-210ENST00000462553 LAMTOR3Q9UHA4 124 aa4.4□□□□□ -1.71
CDC42BPA-210ENST00000462553 A0A0B4J2C4 111 aa4.39□□□□□ -1.71
CDC42BPA-210ENST00000462553 FXYD2P54710 66 aa4.39□□□□□ -1.71
CDC42BPA-210ENST00000462553 CEND1Q8N111 149 aa4.39□□□□□ -1.71
CDC42BPA-210ENST00000462553 NHP2Q9NX24 153 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-210ENST00000462553 A0A0G2JQZ4 141 aa4.38□□□□□ -1.71
CDC42BPA-210ENST00000462553 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-210ENST00000462553 Q6ZQY7 126 aa4.38□□□□□ -1.71
CDC42BPA-210ENST00000462553 hADV29S1A0JD25 119 aa4.37□□□□□ -1.71
CDC42BPA-210ENST00000462553 H7C2G1 150 aa4.37□□□□□ -1.71
CDC42BPA-210ENST00000462553 SLC25A20O43772 301 aa4.37□□□□□ -1.71
CDC42BPA-210ENST00000462553 VAMP3Q15836 100 aa4.37□□□□□ -1.71
CDC42BPA-210ENST00000462553 HRCT1Q6UXD1 115 aa4.37□□□□□ -1.71
CDC42BPA-210ENST00000462553 CD164Q04900 197 aa4.36□□□□□ -1.71
CDC42BPA-210ENST00000462553 BVES-AS1Q5T3Y7 98 aa4.36□□□□□ -1.71
CDC42BPA-210ENST00000462553 RAB37Q96AX2 223 aa4.36□□□□□ -1.71
CDC42BPA-210ENST00000462553 FAM218AQ96MZ4 157 aa4.36□□□□□ -1.71
CDC42BPA-210ENST00000462553 PRO1933Q9H354 126 aa4.36□□□□□ -1.71
CDC42BPA-210ENST00000462553 MT1HP80294 61 aa4.35□□□□□ -1.71
CDC42BPA-210ENST00000462553 HSD52Q0P140 79 aa4.35□□□□□ -1.71
CDC42BPA-210ENST00000462553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-210ENST00000462553 IGLV8-61A0A075B6I0 122 aa4.34□□□□□ -1.71
CDC42BPA-210ENST00000462553 Q5XG85 94 aa4.34□□□□□ -1.71
CDC42BPA-210ENST00000462553 LIMD2Q9BT23 127 aa4.34□□□□□ -1.71
CDC42BPA-210ENST00000462553 K7ERJ3 54 aa4.33□□□□□ -1.72
CDC42BPA-210ENST00000462553 TRIAP1O43715 76 aa4.33□□□□□ -1.72
CDC42BPA-210ENST00000462553 UQCR10Q9UDW1 63 aa4.33□□□□□ -1.72
CDC42BPA-210ENST00000462553 PRO1854Q9UHT4 67 aa4.33□□□□□ -1.72
CDC42BPA-210ENST00000462553 IGFL1Q6UW32 110 aa4.32□□□□□ -1.72
CDC42BPA-210ENST00000462553 PPDPFLQ8WWR9 84 aa4.32□□□□□ -1.72
CDC42BPA-210ENST00000462553 F8WEM9 126 aa4.31□□□□□ -1.72
CDC42BPA-210ENST00000462553 H0YGX0 51 aa4.31□□□□□ -1.72
CDC42BPA-210ENST00000462553 C1orf195Q5TG92 126 aa4.31□□□□□ -1.72
CDC42BPA-210ENST00000462553 CLEC2BQ92478 149 aa4.31□□□□□ -1.72
CDC42BPA-210ENST00000462553 A0A1B0GX51 115 aa4.3□□□□□ -1.72
CDC42BPA-210ENST00000462553 OCIAD2Q56VL3 154 aa4.3□□□□□ -1.72
CDC42BPA-210ENST00000462553 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
CDC42BPA-210ENST00000462553 H3BUT2 72 aa4.29□□□□□ -1.72
CDC42BPA-210ENST00000462553 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-210ENST00000462553 Q6JHZ5 121 aa4.29□□□□□ -1.72
CDC42BPA-210ENST00000462553 TRBV7-7A0A0K0K1E9 115 aa4.28□□□□□ -1.72
CDC42BPA-210ENST00000462553 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
CDC42BPA-210ENST00000462553 C9orf92A6NGG3 77 aa4.27□□□□□ -1.73
CDC42BPA-210ENST00000462553 SMIM6P0DI80 62 aa4.27□□□□□ -1.73
CDC42BPA-210ENST00000462553 SNHG12Q9BXW3 62 aa4.27□□□□□ -1.73
CDC42BPA-210ENST00000462553 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-210ENST00000462553 LOC105371267A0A1B0GV96 52 aa4.25□□□□□ -1.73
CDC42BPA-210ENST00000462553 TCL1BO95988 128 aa4.25□□□□□ -1.73
CDC42BPA-210ENST00000462553 Q6Q795 121 aa4.25□□□□□ -1.73
CDC42BPA-210ENST00000462553 SNCGO76070 127 aa4.24□□□□□ -1.73
CDC42BPA-210ENST00000462553 PSMB2P49721 201 aa4.24□□□□□ -1.73
CDC42BPA-210ENST00000462553 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
CDC42BPA-210ENST00000462553 H3BMG7 143 aa4.23□□□□□ -1.73
CDC42BPA-210ENST00000462553 LST1O00453 97 aa4.23□□□□□ -1.73
CDC42BPA-210ENST00000462553 FABP2P12104 132 aa4.23□□□□□ -1.73
CDC42BPA-210ENST00000462553 USH2AO75445 5202 aa4.22□□□□□ -1.73
CDC42BPA-210ENST00000462553 A0A1W2PNM2 257 aa4.22□□□□□ -1.73
CDC42BPA-210ENST00000462553 DNAL4O96015 105 aa4.22□□□□□ -1.73
CDC42BPA-210ENST00000462553 COX6CP09669 75 aa4.22□□□□□ -1.73
CDC42BPA-210ENST00000462553 TEN1Q86WV5 123 aa4.22□□□□□ -1.73
CDC42BPA-210ENST00000462553 ORMDL1Q9P0S3 153 aa4.22□□□□□ -1.73
CDC42BPA-210ENST00000462553 A0A1B0GV72 72 aa4.21□□□□□ -1.74
CDC42BPA-210ENST00000462553 M0R143 59 aa4.21□□□□□ -1.74
CDC42BPA-210ENST00000462553 TRACP01848 142 aa4.21□□□□□ -1.74
CDC42BPA-210ENST00000462553 Q96NJ1 140 aa4.21□□□□□ -1.74
CDC42BPA-210ENST00000462553 A0A087WSZ3 146 aa4.2□□□□□ -1.74
CDC42BPA-210ENST00000462553 H3BQ85 93 aa4.2□□□□□ -1.74
CDC42BPA-210ENST00000462553 RPL37P61927 97 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-210ENST00000462553 UBE2V1Q13404 147 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms