RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 Q6JHZ5 121 aa8.17□□□□□ -1.1
SKA3-204ENST00000462482 ATOH7Q8N100 152 aa8.17□□□□□ -1.1
SKA3-204ENST00000462482 PCP2Q8IVA1 136 aa8.16□□□□□ -1.1
SKA3-204ENST00000462482 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
SKA3-204ENST00000462482 SNRPEP62304 92 aaKnown RBP8.14□□□□□ -1.11
SKA3-204ENST00000462482 hADV29S1A0JD25 119 aa8.13□□□□□ -1.11
SKA3-204ENST00000462482 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
SKA3-204ENST00000462482 CLEC2BQ92478 149 aa8.13□□□□□ -1.11
SKA3-204ENST00000462482 LINC00575Q6W349 94 aa8.12□□□□□ -1.11
SKA3-204ENST00000462482 Q6ZQY7 126 aa8.12□□□□□ -1.11
SKA3-204ENST00000462482 TRBV7-7A0A0K0K1E9 115 aa8.11□□□□□ -1.11
SKA3-204ENST00000462482 Q6Q795 121 aa8.11□□□□□ -1.11
SKA3-204ENST00000462482 OCIAD2Q56VL3 154 aa8.09□□□□□ -1.11
SKA3-204ENST00000462482 OBSCN-AS1Q96MR7 158 aa8.09□□□□□ -1.11
SKA3-204ENST00000462482 HSBP1L1C9JCN9 74 aa8.08□□□□□ -1.12
SKA3-204ENST00000462482 IGFL1Q6UW32 110 aa8.08□□□□□ -1.12
SKA3-204ENST00000462482 SNHG12Q9BXW3 62 aa8.08□□□□□ -1.12
SKA3-204ENST00000462482 Q75L30 129 aa8.07□□□□□ -1.12
SKA3-204ENST00000462482 LST1O00453 97 aa8.06□□□□□ -1.12
SKA3-204ENST00000462482 SCGB1D1O95968 90 aa8.06□□□□□ -1.12
SKA3-204ENST00000462482 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.06□□□□□ -1.12
SKA3-204ENST00000462482 PPDPFLQ8WWR9 84 aa8.06□□□□□ -1.12
SKA3-204ENST00000462482 BVES-AS1Q5T3Y7 98 aa8.05□□□□□ -1.12
SKA3-204ENST00000462482 SNCGO76070 127 aa8.03□□□□□ -1.12
SKA3-204ENST00000462482 SS18L2Q9UHA2 77 aa8.03□□□□□ -1.12
SKA3-204ENST00000462482 Q96NJ1 140 aa8.02□□□□□ -1.13
SKA3-204ENST00000462482 S100A2P29034 98 aa8.01□□□□□ -1.13
SKA3-204ENST00000462482 C12orf57Q99622 126 aa8□□□□□ -1.13
SKA3-204ENST00000462482 H3BUT2 72 aa7.99□□□□□ -1.13
SKA3-204ENST00000462482 HIST1H4GQ99525 98 aa7.99□□□□□ -1.13
SKA3-204ENST00000462482 TRBV20-1A0A075B6N2 111 aa7.98□□□□□ -1.13
SKA3-204ENST00000462482 CFC1P0CG37 223 aa7.95□□□□□ -1.14
SKA3-204ENST00000462482 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
SKA3-204ENST00000462482 HIST1H2BLQ99880 126 aa7.94□□□□□ -1.14
SKA3-204ENST00000462482 FLGP20930 4061 aaPredicted RBP7.93□□□□□ -1.14
SKA3-204ENST00000462482 HIST3H2BBQ8N257 126 aa7.93□□□□□ -1.14
SKA3-204ENST00000462482 GHRHP01286 108 aa7.92□□□□□ -1.14
SKA3-204ENST00000462482 RAB37Q96AX2 223 aa7.92□□□□□ -1.14
SKA3-204ENST00000462482 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
SKA3-204ENST00000462482 H0YGX0 51 aa7.91□□□□□ -1.14
SKA3-204ENST00000462482 A8MUU9 505 aa7.9□□□□□ -1.14
SKA3-204ENST00000462482 S100A6P06703 90 aa7.9□□□□□ -1.14
SKA3-204ENST00000462482 NDUFV3P56181 108 aaKnown RBP7.9□□□□□ -1.14
SKA3-204ENST00000462482 A0A087WSZ3 146 aa7.89□□□□□ -1.15
SKA3-204ENST00000462482 COX8AP10176 69 aa7.87□□□□□ -1.15
SKA3-204ENST00000462482 H3BMG7 143 aa7.86□□□□□ -1.15
SKA3-204ENST00000462482 FABP2P12104 132 aa7.86□□□□□ -1.15
SKA3-204ENST00000462482 SIGMAR1Q99720 223 aa7.86□□□□□ -1.15
SKA3-204ENST00000462482 FAM236DA0A1B0GTK5 79 aa7.85□□□□□ -1.15
SKA3-204ENST00000462482 FAM236CP0DP71 79 aa7.85□□□□□ -1.15
SKA3-204ENST00000462482 DLEU1O43261 78 aa7.84□□□□□ -1.15
SKA3-204ENST00000462482 DSCR10P59022 87 aa7.84□□□□□ -1.15
SKA3-204ENST00000462482 A0A0B4J2C4 111 aa7.83□□□□□ -1.16
SKA3-204ENST00000462482 A0A1B0GX51 115 aa7.82□□□□□ -1.16
SKA3-204ENST00000462482 LINC00313P59037 77 aa7.81□□□□□ -1.16
SKA3-204ENST00000462482 FAM218AQ96MZ4 157 aa7.81□□□□□ -1.16
SKA3-204ENST00000462482 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
SKA3-204ENST00000462482 C14orf144Q96I85 54 aa7.79□□□□□ -1.16
SKA3-204ENST00000462482 RBM12B-AS1Q9P1G2 102 aa7.79□□□□□ -1.16
SKA3-204ENST00000462482 HIGD1BQ9P298 99 aa7.79□□□□□ -1.16
SKA3-204ENST00000462482 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
SKA3-204ENST00000462482 A6NJY4 79 aa7.78□□□□□ -1.16
SKA3-204ENST00000462482 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
SKA3-204ENST00000462482 ANKRD29Q8N6D5 301 aa7.77□□□□□ -1.17
SKA3-204ENST00000462482 A0A1W2PNM2 257 aa7.76□□□□□ -1.17
SKA3-204ENST00000462482 KRTAP9-7A8MTY7 169 aa7.76□□□□□ -1.17
SKA3-204ENST00000462482 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
SKA3-204ENST00000462482 S100A1P23297 94 aa7.76□□□□□ -1.17
SKA3-204ENST00000462482 PRO1854Q9UHT4 67 aa7.76□□□□□ -1.17
SKA3-204ENST00000462482 H3BQ85 93 aa7.75□□□□□ -1.17
SKA3-204ENST00000462482 DNAL4O96015 105 aa7.75□□□□□ -1.17
SKA3-204ENST00000462482 TRBV7-4A0A0J9YYF1 115 aa7.74□□□□□ -1.17
SKA3-204ENST00000462482 SPATA45Q537H7 98 aa7.74□□□□□ -1.17
SKA3-204ENST00000462482 PAM16Q9Y3D7 125 aa7.74□□□□□ -1.17
SKA3-204ENST00000462482 USH2AO75445 5202 aa7.74□□□□□ -1.17
SKA3-204ENST00000462482 CEND1Q8N111 149 aa7.73□□□□□ -1.17
SKA3-204ENST00000462482 ORMDL1Q9P0S3 153 aa7.72□□□□□ -1.17
SKA3-204ENST00000462482 VAMP8Q9BV40 100 aa7.71□□□□□ -1.18
SKA3-204ENST00000462482 A0A1B0GV72 72 aa7.7□□□□□ -1.18
SKA3-204ENST00000462482 TRACP01848 142 aa7.7□□□□□ -1.18
SKA3-204ENST00000462482 MT2AP02795 61 aa7.7□□□□□ -1.18
SKA3-204ENST00000462482 IGHV6-1A0A0B4J1U7 121 aa7.69□□□□□ -1.18
SKA3-204ENST00000462482 KRTAP16-1A8MUX0 517 aa7.69□□□□□ -1.18
SKA3-204ENST00000462482 TRIAP1O43715 76 aa7.69□□□□□ -1.18
SKA3-204ENST00000462482 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
SKA3-204ENST00000462482 MTURNQ8N3F0 131 aa7.69□□□□□ -1.18
SKA3-204ENST00000462482 TMEM256-PLSCR3K7ERE1 68 aa7.68□□□□□ -1.18
SKA3-204ENST00000462482 PSMB2P49721 201 aa7.68□□□□□ -1.18
SKA3-204ENST00000462482 DEFB116Q30KQ4 102 aa7.68□□□□□ -1.18
SKA3-204ENST00000462482 SSPOA2VEC9 5147 aa7.67□□□□□ -1.18
SKA3-204ENST00000462482 CCKP06307 115 aa7.67□□□□□ -1.18
SKA3-204ENST00000462482 COX6CP09669 75 aa7.67□□□□□ -1.18
SKA3-204ENST00000462482 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
SKA3-204ENST00000462482 LCE2BO14633 110 aa7.66□□□□□ -1.18
SKA3-204ENST00000462482 HRES1P13985 223 aa7.66□□□□□ -1.18
SKA3-204ENST00000462482 FXYD2P54710 66 aa7.65□□□□□ -1.18
SKA3-204ENST00000462482 NOTCH2NLQ7Z3S9 236 aa7.65□□□□□ -1.18
SKA3-204ENST00000462482 MPLKIPQ8TAP9 179 aa7.65□□□□□ -1.18
SKA3-204ENST00000462482 LINC00472Q9H8W2 130 aa7.65□□□□□ -1.18
SKA3-204ENST00000462482 C8orf87E5RJ46 101 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 701.3 ms